mRNA_P-littoralis_Contig133.42.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig133.42.1 vs. uniprot
Match: A0A6H5JN16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN16_9PHAE) HSP 1 Score: 282 bits (722), Expect = 2.770e-91 Identity = 152/199 (76.38%), Postives = 170/199 (85.43%), Query Frame = 1
Query: 1 MDHRPGGPPXXPRGKRIAPAHHDDHRLEPSTGAGYYVPRRLGERELDRNHDRDYPEENATIYTS--RNILAETPETTVGEHVHMKGELSFERLLRVDGSFKGQLVSTGDLVIGVTGVVRGNIEHLREVVSDGTIIGNIQAERVRLRRSAIVIGDVACLSISIDPDVSISGVLNVHKEAPNKLHLEGQEGPPEDEDEDFS 591
M+ GGPP PRGKRIAPA+HD+ R EPS GAGY+VPRRLGERELDRN R EE AT T RNILAETPETTVGE+VH+KGELSF+RLLRVDGSFKGQLVSTGDLVIG TG+VRGNIEHLREVVSDGT++GNIQAERVRLRRSAIVIG++ C S+S+DPDVSISG LNVH +AP++LHLEG+E PEDE D S
Sbjct: 1 MELHSGGPPPPPRGKRIAPAYHDE-RSEPSAGAGYHVPRRLGERELDRNPGRI--EEPATYATPAPRNILAETPETTVGENVHVKGELSFDRLLRVDGSFKGQLVSTGDLVIGATGIVRGNIEHLREVVSDGTVVGNIQAERVRLRRSAIVIGNITCYSLSMDPDVSISGKLNVHIQAPSRLHLEGEEEAPEDEMADSS 196
BLAST of mRNA_P-littoralis_Contig133.42.1 vs. uniprot
Match: D7FI98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI98_ECTSI) HSP 1 Score: 184 bits (468), Expect = 5.390e-54 Identity = 97/134 (72.39%), Postives = 113/134 (84.33%), Query Frame = 1
Query: 247 KGELSFERLLRVDGSFKGQLVSTGDLVIGVTGVVRGNIEHLREVVSDGTIIGNIQAERVRLRRSAIVIGDVACLSISIDPDVSISGVLNVHKEAPNKLHLEGQEGPPEDEDEDFSENKSAGGTTNVDDHKRKNS 648
+GELSF+RLLRVDGSFKGQLVSTGDLVIG TGVVRGNI+HLREVVSDGT++GNIQAERVRLRRSAIVIG++ C S+S+DPDVSISG LNVH +AP++LHL+G+E PEDE D S N N D K+K+S
Sbjct: 14 QGELSFDRLLRVDGSFKGQLVSTGDLVIGATGVVRGNIDHLREVVSDGTVVGNIQAERVRLRRSAIVIGNITCYSLSMDPDVSISGKLNVHIQAPSRLHLDGEEEAPEDEVADSSGNADRLDDKNGDSGKQKSS 147
BLAST of mRNA_P-littoralis_Contig133.42.1 vs. uniprot
Match: A0A835YKE5_9STRA (Polymer-forming cytoskeletal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKE5_9STRA) HSP 1 Score: 119 bits (297), Expect = 3.060e-29 Identity = 56/111 (50.45%), Postives = 80/111 (72.07%), Query Frame = 1
Query: 187 TSRNILAETPETTVGEHVHMKGELSFERLLRVDGSFKGQLVSTGDLVIGVTGVVRGNIEHLREVVSDGTIIGNIQAERVRLRRSAIVIGDVACLSISIDPDVSISGVLNVH 519
T + +ETPETT+GE V + GELSF+RLLR+DG F G+L+S GDLV+G TGV+ G++ + EV+ DG ++G+I ++V LR A V G++ C S+ +DP V + G LNVH
Sbjct: 22 TVTSFQSETPETTIGERVSVSGELSFDRLLRIDGRFSGRLLSQGDLVVGPTGVLTGDVVDMGEVIVDGKVVGDISVQKVSLRGRAEVHGNITCKSLCVDPTVIVVGGLNVH 132
BLAST of mRNA_P-littoralis_Contig133.42.1 vs. uniprot
Match: A0A6G0WCC1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCC1_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.130e-28 Identity = 68/170 (40.00%), Postives = 101/170 (59.41%), Query Frame = 1
Query: 58 AHHDDH-RLEPSTG--AGYYVPRRLGERELDRNHDRDYPEENATIYTSRNILAETPETTVGEHVHMKGELSFERLLRVDGSFKGQLVSTGDLVIGVTGVVRGNIEHLREV-VSDGTIIGNIQAERVRLRRSAIVIGDVACLSISIDPDVSISGVLNVHKEAPNKLHLEGQ 555
A DDH ++P G A +PRR P+ T+ + ETT+G V MKGELSFERLLR++G F+G+L+S G LV+G G++ GNI+ ++EV V+ G ++GNIQ +R+ LR + G+V S+ IDPD + G LN++ AP K++L+G+
Sbjct: 22 ASEDDHDAMDPDEGYAAPPMMPRRGRSTRAASQSPPSSPQGGRTMVAPLKTIEGDAETTIGVAVKMKGELSFERLLRIEGEFEGKLISKGSLVVGHKGLLNGNIDGMKEVLVAGGRVLGNIQVDRLVLRDKGQIFGNVTAKSVRIDPDCILVGTLNINPHAPQKINLKGE 191
BLAST of mRNA_P-littoralis_Contig133.42.1 vs. uniprot
Match: A0A5D6Y579_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y579_9STRA) HSP 1 Score: 114 bits (286), Expect = 9.740e-27 Identity = 58/120 (48.33%), Postives = 85/120 (70.83%), Query Frame = 1
Query: 199 ILAETPETTVGEHVHMKGELSFERLLRVDGSFKGQLVSTGDLVIGVTGVVRGNIEHLREV-VSDGTIIGNIQAERVRLRRSAIVIGDVACLSISIDPDVSISGVLNVHKEAPNKLHLEGQ 555
I+ PETT+G V MKGELSFERLLR++G F+G+LVS G LV+G GV+ G +E+++EV V+ G I+GNI E++ LR A V G++ ++ IDPD + G LNV+ +AP ++ +G+
Sbjct: 82 IVDAEPETTIGVAVKMKGELSFERLLRIEGEFEGKLVSKGSLVVGAKGVLTGPVENMKEVHVTGGKIVGNITVEKLVLRDKAQVFGNITAKTVKIDPDCVVVGRLNVNPQAPELINEKGE 201
BLAST of mRNA_P-littoralis_Contig133.42.1 vs. uniprot
Match: F0VZS1_9STRA (Uncharacterized protein AlNc14C3G400 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZS1_9STRA) HSP 1 Score: 112 bits (281), Expect = 3.930e-26 Identity = 57/120 (47.50%), Postives = 80/120 (66.67%), Query Frame = 1
Query: 199 ILAETPETTVGEHVHMKGELSFERLLRVDGSFKGQLVSTGDLVIGVTGVVRGNIEHLREV-VSDGTIIGNIQAERVRLRRSAIVIGDVACLSISIDPDVSISGVLNVHKEAPNKLHLEGQ 555
I+ ETT+G V M+GELSFERLLR++G F G+LVS G LV+G G + G+++ ++EV ++ G I+GNI E+V LR A V G++ SI +DPD I G LNVH +AP + G+
Sbjct: 86 IIDAEAETTIGAAVKMRGELSFERLLRIEGEFDGKLVSKGSLVVGTKGCLLGDVDSMKEVFITGGKIVGNIAVEKVVLRDKASVFGNITAKSIKVDPDCVIVGTLNVHPQAPQVIDENGE 205
BLAST of mRNA_P-littoralis_Contig133.42.1 vs. uniprot
Match: A0A7S3ZTD0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTD0_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.400e-24 Identity = 56/124 (45.16%), Postives = 81/124 (65.32%), Query Frame = 1
Query: 199 ILAETPETTVGEHVHMKGELSFERLLRVDGSFKGQLVSTGDLVIGVTGVVRGNIEHLREVVSDGTIIGNIQAERVRLRRSAIVIGDVACLSISIDPDVSISGVLNVHKEAPNKLHLEGQEGPPE 570
IL PET +GE + ++G L FERLLR+DG F+G LVSTGDL++G G + G++ + ++V G +IGNI + + L +A + GDV C ++ +DP V + G LNV+ APN + G E PPE
Sbjct: 115 ILESEPETVIGETLQIEGTLRFERLLRLDGKFEGDLVSTGDLIVGPRGELVGDVRDMADLVVFGKVIGNINVDHLELCGAASIYGDVTCKTLLMDPTVVLVGTLNVNPFAPNLMDRHGDEVPPE 238
BLAST of mRNA_P-littoralis_Contig133.42.1 vs. uniprot
Match: T0RP53_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RP53_SAPDV) HSP 1 Score: 107 bits (268), Expect = 2.840e-24 Identity = 57/114 (50.00%), Postives = 77/114 (67.54%), Query Frame = 1
Query: 217 ETTVGEHVHMKGELSFERLLRVDGSFKGQLVSTGDLVIGVTGVVRGNIEHLREV-VSDGTIIGNIQAERVRLRRSAIVIGDVACLSISIDPDVSISGVLNVHKEAPNKLHLEGQ 555
ETT+G V MKGELSFERLLR++G F G+L+S G L+IG G++ G +E ++EV VS G IIGNI ER+ LR SI IDPD + G LNV+ AP++++L+G+
Sbjct: 71 ETTIGVAVKMKGELSFERLLRIEGEFDGRLISKGSLIIGAKGLLTGPVEGMKEVLVSGGRIIGNINVERLVLRXXXXXXXXXTAKSIRIDPDCVVLGSLNVNPHAPSRINLKGE 184
BLAST of mRNA_P-littoralis_Contig133.42.1 vs. uniprot
Match: F0Y5F7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5F7_AURAN) HSP 1 Score: 110 bits (274), Expect = 6.120e-23 Identity = 52/122 (42.62%), Postives = 84/122 (68.85%), Query Frame = 1
Query: 193 RNILAETPETTVGEHVHMKGELSFERLLRVDGSFKGQLVSTGDLVIGVTGVVRGNIEHLREVVSDGTIIGNIQAERVRLRRSAIVIGDVACLSISIDPDVSISGVLNVHKEAPNKLHLEGQE 558
+++L PET +GE + ++G+L FERLLR+DG F+G+L+S GDL++G G + G+++ + ++V G +IGNI +RV L SA + GD+ C + +DP V + G LN++ APNK+ +G E
Sbjct: 352 KSLLEMEPETVIGETLSIEGKLRFERLLRLDGKFEGELISEGDLIVGPQGELVGDVKTMSDIVVFGKVIGNIAVDRVELCGSASIYGDITCKVLLMDPTVVLVGNLNINPFAPNKMAPDGSE 473
BLAST of mRNA_P-littoralis_Contig133.42.1 vs. uniprot
Match: A0A1V9ZZB6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZB6_9STRA) HSP 1 Score: 102 bits (253), Expect = 4.010e-22 Identity = 52/114 (45.61%), Postives = 75/114 (65.79%), Query Frame = 1
Query: 217 ETTVGEHVHMKGELSFERLLRVDGSFKGQLVSTGDLVIGVTGVVRGNIEHLREV-VSDGTIIGNIQAERVRLRRSAIVIGDVACLSISIDPDVSISGVLNVHKEAPNKLHLEGQ 555
ETT+G V M+GELSFERLLR++G F G+L+S G LV+G G++ G ++ ++EV +S G IIGNI ER+ SI IDPD + G LNV+ AP++++L+G+
Sbjct: 71 ETTIGPAVKMRGELSFERLLRIEGEFDGRLISKGSLVVGAKGLLTGPVDGMKEVLISGGRIIGNINVERLXXXXXXXXXXXXTAKSIRIDPDCVVLGSLNVNPHAPSRINLKGE 184 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig133.42.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig133.42.1 >prot_P-littoralis_Contig133.42.1 ID=prot_P-littoralis_Contig133.42.1|Name=mRNA_P-littoralis_Contig133.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=261bp MDHRPGGPPPPPRGKRIAPAHHDDHRLEPSTGAGYYVPRRLGERELDRNHback to top mRNA from alignment at P-littoralis_Contig133:140799..144105- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig133.42.1 ID=mRNA_P-littoralis_Contig133.42.1|Name=mRNA_P-littoralis_Contig133.42.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3307bp|location=Sequence derived from alignment at P-littoralis_Contig133:140799..144105- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig133:140799..144105- >mRNA_P-littoralis_Contig133.42.1 ID=mRNA_P-littoralis_Contig133.42.1|Name=mRNA_P-littoralis_Contig133.42.1|organism=Pylaiella littoralis U1_48|type=CDS|length=783bp|location=Sequence derived from alignment at P-littoralis_Contig133:140799..144105- (Pylaiella littoralis U1_48)back to top |