prot_P-littoralis_Contig133.30.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig133.30.2
Unique Nameprot_P-littoralis_Contig133.30.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length819
Homology
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A6H5KZW9_9PHAE (XRN_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZW9_9PHAE)

HSP 1 Score: 988 bits (2553), Expect = 0.000e+0
Identity = 529/816 (64.83%), Postives = 622/816 (76.23%), Query Frame = 0
Query:   13 LLLCQGVV--EAGIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQECTRPCYEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFICSQTNTGSFRLSSIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALKKGKHRDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQMHELSKEDAERSGGSHGPPVRGVKKWRSSTWVRGKEYSW--LHTAAKERAAFHEAAAKLLEELVPDVHEKFLEQEKDRLLEQAQLDRDLEDIDSDLDDD--LEGGNVRSSRWAGKKPLFDVQEYLTGVLWNLQMYIDGYXXXXXXXXXXXXXXXVSDILSFLQNDS-DSLAKVSPPVTQAPPLPAAIACLCMMPMTDAGKAFVPERLQPLLTPGSPLVEALKWKGDSSGLDIPKILRVVSEEAPEELRGFHDGSRSSCGWKVVFLDLSAPQGEPPSPPPPSKDFPPLENSRRCSAYKFKRIQATSLPATSTPRNLAWSSPSNPTWQQEPSILGQPYKTPFDKDAEERGGGRGXXXXXXXXXXXXXXXGRAAQPKSVAWRKKTSTPRIRQGGGAGRGSGGQLGVSGRTEDTGVPNYSRGAP--AAEERKARPSPFPSSPRSDTR-ASMCCGGPALGRSQCRILL 818
            LLLCQ ++  EAGI GFHKWFV  FP AVT+A    + ESFDHVCIDMNQILHVAMRKA DEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQR RREN KRNS+Y +SALHLSPGTKFM+DVASAMEYYAFQECTRPCY+GV+FYISGANVPGEGELKCIDWLKHM  P  +ES VIVGGDADLILQGLALSEVKNTFICSQT+ GS+RLSSIWEVVR+LE  FPGQS  VR DLAVLIMLNGNDYLPKVRGVSF RCF++Y ALK+GKHRDNFL++G+ +SI WEFL+D+L D+     AEA+GY  +SLEQMDLNNRYP AGS+F   VQQG+LG+ VEI++H+LS E +  SGG+        KKW+S TWVRGKEY++  LH   K++   H AA KLLEEL+PD++++FLEQEK R+LEQAQLD++ EDIDS+LD+D   E G  R SR  GK PLFDV+ +L GVLWNLQMYIDGY                +DI+S+++  S D LA ++ PV  APPLPA+IACLCM+PMTD GK+F+P+RLQPL+ PGSPL+EAL+W+G SSGLDI KIL+      P+EL  FHDG+ SSC WKVV+LDLSA Q  PP+PPPPSKDFPPL++SR  ++YKF+RIQ TS+ ATS PRNL WSS S+ + ++   +L  PYK   +   +  GG R                G AA PKS AWRKK+S PRIR+ G AG GS  + G +GR ED   P+  R  P   A + KARPSPFPSS R D+R +SMC G  A  RS CR+LL
Sbjct:    9 LLLCQAIICAEAGINGFHKWFVQEFPTAVTDA---SRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMDDVASAMEYYAFQECTRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKP--DESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRDNFLIDGDKKSICWEFLQDLLADMIPSIVAEAEGYLAVSLEQMDLNNRYPPAGSVFKMAVQQGKLGDGVEIEVHDLSDEVSGSSGGT--------KKWKSVTWVRGKEYTYHFLHVG-KKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLDEDSGAENGRERGSR-KGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQELSEFHDGAHSSCAWKVVYLDLSARQRTPPAPPPPSKDFPPLDSSRHSNSYKFQRIQVTSMSATSAPRNLPWSSASDSSSEEMQGVLDLPYKKALNGSGKPEGGRR---RRGSAGKGARGPRGGAAPPKSAAWRKKSSAPRIRKSGKAGEGSDARRGTNGRGEDA-APDLPRRPPPAVAADVKARPSPFPSSARPDSRRSSMCLGKLATRRSHCRLLL 805          
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A836C8H5_9STRA (DRBM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8H5_9STRA)

HSP 1 Score: 298 bits (763), Expect = 3.360e-84
Identity = 276/937 (29.46%), Postives = 381/937 (40.66%), Query Frame = 0
Query:   21 EAGIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQEC------------------------------------------------------------------------------------------------------------------------------TRPCYEG---------------------------VRFYISGANVPGEGELKCIDWLKHMSNP-------------------------------------GSEESVVIVGGDADLILQGLALSEVKNTFICSQTNTGSFRLSSIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALKKGKH-RDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQM--------HELSKEDAERSGGSHGPPVRGVKKWRSSTWVRGKEYSWLHTAAKERAAFHEAAAKLLEELVPDVHEKFL---EQEKDRLLEQAQLDRDLEDI---------------DSDLDDDLEGGNVRSS-----RW--AGKKPLFDVQEYLTGVLWNLQMYIDGYXXXXXXXXXXXXXXXVSDILSFLQN-----------DSDSLAKVSPPVTQAPPLPAAIACLCMMPMTDAGKAFVPERLQPLLTPGSPLVEALKWKGD----------SSGL-------DIPKILRVVSEEAPEELRGFHDGSRSSCGWKVV-FLDLSAPQG-EPPSPPPPSKDFPPLENSRRCSAYKFKRIQATSLPATSTPRNLAWSSPSNPTWQQEPS-----ILGQPYKTPF 698
            EAGI GF KWF G F  +V  A  P Q++ FDHVC DMNQILHVA+R++A+E+ AI R F +++  LK   PR+SVVFAFDGSAPLAKLL QR RRE  +R  RY +SAL+++PGT FM   A AM YYA+                                                                                                                                  RP Y G                           V +Y+  A+V GEGELK +DW  H++                                       G EESVVIVGGDADL+LQGLALS+VKN F+ +     S R+ S+W+V R LE  FPG+S  +R+DL  L++LNGNDYLPKVRGVSF RCFR Y A K     + +F+++ E +  +W FL   L     G     +G          +  +    G     +++ G+                 +++  E+ E +G S   P  GV     S  V G   +     A ++ A   AA  +L+EL P+++E +L   ++   +LL  AQ  R                    D  LD DL G            W  A  K   DV+ YLTGVLWN+ MY DG+                 D+  +++                L  V+ PV++ P LP+ +ACL MM  +  G+  VP RL+ LL   SP+                   ++G+       DI  +L  V++  PE L GF +G R    W V+       P+G  P + PPP    PPL+   + S    K +   ++PATS+P   +W+  SN     +P+     +L   +K PF
Sbjct:   20 EAGIQGFSKWFKGVFHDSVM-AVQPGQRDQFDHVCFDMNQILHVAVRRSANEEQAIARTFTEISQVLKTLEPRRSVVFAFDGSAPLAKLLTQRARREGGRRAERYQMSALNITPGTDFMRSAAEAMRYYAYTRLPGGTARLPGGTYNHTLXXXXXXXXXXXXXXXXXXXXAGVCVHDDITPXXXXXXXXXXXXXXXXXXXXPDGTQASKFGPGDKVWLDLGEPGAPQWTGPWAIQGRKGADDLVLTHHKGGARKVVSAALVRP-YRGDPPPGPRGTREGVXXXXXXXXXXXXXXVTYYMGTADVLGEGELKILDWA-HLAGRRPRSLAALRTAXXXXXXXXXXXXXXXXXXXXXXAVAHGGEESVVIVGGDADLVLQGLALSKVKNLFVYASELKRSGRIVSLWQVTRQLEAMFPGESGGIRNDLIFLLVLNGNDYLPKVRGVSFGRCFRHYCAAKAAPGGQGSFIIDSERQRFNWPFLLRFLKFATMGAAMALQGPTPAQWVNAAVQKKVIRGGR--KKLIRGGQXXXXXXXXXXXXXXXVTYDVFSEEPEHNGDS---PRFGV-----SVAVAGTTLTVPAEHASQKDARRAAATLVLQELAPELYEDYLVARQRHDAQLLAAAQQRRXXXXXXXXXXXXXXXXXLADDXXLDLDLNGDESSDEYEYEPEWDRAPGKGGHDVKAYLTGVLWNIHMYQDGFAPDNYWRYGHRYAPSCHDMADWVEQRIALEASGADEQGQPLTDVASPVSRKPALPSDVACLAMM--SAEGRDLVPRRLRALLDADSPVGNMFAPPASXXXXXXXXQPAAGVVPQRREFDIDALLAAVNDHCPEALNGFAEG-RQEVKWTVIQHASQPLPRGCTPLNLPPP---IPPLDRFLKVSPDTVKCV---TMPATSSPPGRSWAG-SNWAGAADPAAGAIPLLSVKFKKPF 933          
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: M1US37_CYAM1 (XRN_N domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1US37_CYAM1)

HSP 1 Score: 263 bits (672), Expect = 2.280e-73
Identity = 181/564 (32.09%), Postives = 271/564 (48.05%), Query Frame = 0
Query:   23 GIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRR--------ENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFICSQTNTGSFR-----------------LSSIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALK--KGKHRDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQMHELSKEDAERSGGSHGPPVRGVKKWRSSTWVRGKEYSWLHTAAKERAAFHEAAAKLLEELVPDVHEKFLEQEKDRLLEQAQLDRDLEDIDSDLDDDLEGGNVRSSRWAGKKPLFDVQEYLTGVLWNLQMYIDGYXXXXXXXXXXXXXXXVSDILSFL-QNDSDSLAKVSPPVTQAPPLPAAIACLCMMPMTDA 556
            GIAGF +W++  FP  V         E FDHV  D+NQ++H+A R A + D    R+FR ++  L+ C P+KSV  AFDG APLAKL+ Q+ RR           KR  R GV  L LSPGT+ M+    A+E+Y     +  R  Y+ VRF +SG  VPGEGE+K ID++    +P  + SVV++G DADL++ GLA  +V+N F+   T   + +                 + S+W+ +R L+  FPG++  +R DL V++M+ GNDYLPK+RG SF+  + +Y ALK  KG  R  +LV  E RS  WEFL  ++  +           P ++ E +++       G     + Q G    +        SK+  ER+                           +H +  E     +AA   +   V D  +         +LE+  +   +      +DDD              + L+D +E+L  +LW L MYIDG+                SDI+ +L +ND D L ++ PP++ APPLP   A L ++P + A
Sbjct:    2 GIAGFQRWYLENFPSTVVTVTGESAPEHFDHVLFDLNQLIHLAARVARNRDQFFIRLFRWLDNILRLCVPKKSVFIAFDGPAPLAKLVTQKRRRVLESRKLHRTRKRKRRCGVDVLSLSPGTELMQLTLQAVEFYVCSRLQSKRHLYQNVRFVVSGPTVPGEGEIKIIDYIHRYVDP--QHSVVVIGSDADLVVLGLATQKVRNFFVFVITPRANMQDAPEHGTAQKRQAISAIVISVWQWIRVLDRFFPGETPSLRLDLVVMLMMQGNDYLPKLRGTSFNSIWEAYKALKLDKGPMRGKYLVCREQRSFDWEFLYALMKRLINPLV------PNLTKELIEMYREASIRGQEALRLAQAGNASVEASSSCESESKDSVERN---------------------------VHPSDLEDGTEPDAAHGEISADVTDPED---------ILEKVDIPEGIS-----VDDD--------------EKLYDTEEWLRTLLWALAMYIDGFCPDFYHTYSRAYGPSASDIVRWLKENDGDPLLQLQPPLSVAPPLPPHAALLALVPASAA 502          
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A7S1TFG2_9RHOD (Hypothetical protein n=4 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFG2_9RHOD)

HSP 1 Score: 244 bits (623), Expect = 8.550e-67
Identity = 204/693 (29.44%), Postives = 319/693 (46.03%), Query Frame = 0
Query:   52 DHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHL-----SPGTKFMEDVASAMEYYAFQECTR----PCYEGVRFYISGANVPGEGELKCIDWLKHM---SNPGSE------ESVVIVGGDADLILQGLALSEVKNTFICSQTNTGSFRLSSIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALKKGKHR--DNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQMHELSKEDAERSGGSHGPPVRGVKKWRSSTWVRGKEYSWLHTAAKERAAFHEAAAKLLEELVPDVHEKFLEQEKDRLLEQAQLDRDLEDIDSDLDDDLEGGNVRSSRWAGKKPLFDVQEYLTGVLWNLQMYIDGYXXXXXXXXXXXXXXXVSDILSFL-------QNDS----------------DSLAKVSPPVTQAPPLPAAIACLCMMPMTDAGKAFVPERLQPLLTPGSPLVEALKWKGDSSGL-DIPKILRVVSEEAPEELRGFHDGSRSSCGWKVVFLDLSAPQGEPPSPPPPSKDFPPLENSRRCSAYKFKRIQATSLPATSTPRNLAWSSPSNPTWQQEPSILGQPYKTPFDK 700
            DHVC D+NQ++H+A+RK+ +E+  + R+FR+++  LK+C P++SV FAFDG  P+AKLL QR RR NP  + R  ++  H+     +PGT+ M  +  A++Y+A   C+R      Y+ V   ISG +VPGEGE+K  DWL         G++      ESV+++GGDAD++LQGLA +  ++ F+ +Q+      + SI  +V+ALE +FPG+SD VR D  VL ++NGNDYLPKVRGV FD  +  Y A+KKG+ +    +L++   R+ +W FL  +L  I +         P + L +  L    P+         +  E   DV    +E+                                   L+T     +A   AA       +PDV +     E+D     A        +  D + D E     ++       LFD++ +L G+LWN+QMY+DG+                + I++++       Q +S                D L  +  P++   PL    A + M+P   +    +P  +Q L   G+      + + DS  L ++ K+L  V +  P  L    +  R+  G   +    S P+     PPPP   F     S R  ++  + +  T    T+ P  L W+S S     Q  S   QP K  F K
Sbjct:   23 DHVCFDLNQVIHMALRKSPNEEKLVIRLFRNIDAALKQCIPKRSVYFAFDGPGPMAKLLTQRVRRSNPANSQRKVLANRHIDPNAITPGTELMYMLQDALDYFA---CSRLEGDMKYDKVDMRISGPDVPGEGEVKIFDWLNSFVARREAGTQVSSIVTESVIVIGGDADIVLQGLATTSFRDLFVYAQSRRDEGTVISISLLVKALEDNFPGESDRVRLDFIVLCLMNGNDYLPKVRGVGFDSLWNGYIAIKKGREQFQGQYLLDSTRRTFNWPFLVALLETIRSVVIE-----PHVLLAEKSLQVEEPS---------RMNEEEHDVPPDPNEII----------------------------------LYTGDMTASASTSAA-------IPDVDDD----EEDH----ADXXXXXXSVGDDGEYDYESAYDETNTGESPNRLFDIELFLRGILWNVQMYVDGFCPDYTYVYPELYAPSPTAIMNWVKAHDGTVQTNSIDTTPHFSARLDDILGDPLFSIQGPLSTVQPLEPHKAAIAMLP--SSASHLLPGPIQEL---GASCTALDRARRDSMYLRELSKVLDAV-DSIPRSLYTRAELRRTRFGNVHLIRKTSRPRAASQLPPPPVARF----RSLRVPSHLNRMLVTT----TTAPPCLRWTSAS-----QVISRGSQPGKRAFSK 630          
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: L1JQ07_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQ07_GUITC)

HSP 1 Score: 230 bits (587), Expect = 2.500e-66
Identity = 119/243 (48.97%), Postives = 162/243 (66.67%), Query Frame = 0
Query:   58 MNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQECTRPC-YEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFICSQTNTGSFRLS-------------SIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALK 286
            MN +LH A RKA D +HAI R++++++ TL+   P KSVV AFDG  PLAKLL QR RR    + S+Y +S LH++PGTKFM+ +  A EYYA         ++ V FYISGA+V GEGE+K I+W+ ++    ++E ++IVGGDADL+LQGLA+  VK+ F+ +  +      S             S+WEVVR+LE  FPGQS  VR+DL VL+++NGNDYLPKVRG SF+  FR+Y  +K
Sbjct:    1 MNGLLHTACRKAKDFEHAILRVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRNKSSKASKYKLSGLHITPGTKFMQTMREACEYYAALRLVASAKFKNVAFYISGADVAGEGEIKIIEWIHNLLQNQNDEKIIIVGGDADLVLQGLAVLRVKDLFVYAGKDMSQHPSSRKAKGKSSPSIVLSMWEVVRSLERLFPGQSQAVRADLIVLMIMNGNDYLPKVRGGSFESFFRAYKKVK 243          
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A7J7IHE6_9RHOD (XRN_N domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IHE6_9RHOD)

HSP 1 Score: 242 bits (617), Expect = 1.190e-65
Identity = 168/564 (29.79%), Postives = 268/564 (47.52%), Query Frame = 0
Query:   23 GIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRN--------SRYGVSALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFICSQTNTGSFRLSS-----------------IWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALK--KGKHRDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQMHELSKEDAERSGGSHGPPVRGVKKWRSSTWVRGKEYSWLHTAAKERAAFHEAAAKLLEELVPDVHEKFLEQEKDRLLEQAQLDRDLEDIDSDLDDDLEGGNVRSSRWAGKKPLFDVQEYLTGVLWNLQMYIDGYXXXXXXXXXXXXXXXVSDILSFLQN-DSDSLAKVSPPVTQAPPLPAAIACLCMMPMTDA 556
            GIAGF +WF+  FP   T        ESFDHV  D+NQ++H+A R A + D    R++R ++  L+ C P++SV  AFDG APLAKL+ Q+ RR    R          R GV  L LSPGT+ M+    A+E+Y     +  R  Y  +RF +SG  VPGEGE+K ID++     P    SV+++G DADL+L GLA  ++++ F+   T   S +++S                 +W+ +R L+  FPG++  VR DLA+L+M+ GNDY+PK+RG SF   + +Y ALK  +G     +L+ GE R+I+ EFL  +++ +      E    P ++ + +++       G                  +M  L++ ++ R+G +  P    +       +    E     +  KE                           K+ +++    D  LE +++               +   + +FD + +L  +LW L MY+DG+                +DI+ +LQ  D D +  + PP++ APPLP   A L ++P T A
Sbjct:    2 GIAGFQRWFLETFPSTATTITDETLPESFDHVLFDLNQLIHLAARVAKNRDQFFIRLYRWLDKVLRLCVPKESVFIAFDGPAPLAKLVTQKRRRVLEARKLTRKLEPKKRCGVDVLSLSPGTELMQMTLQAIEFYVCSRLQSKRNLYRNLRFVVSGPTVPGEGEIKIIDYIHRCVEP--HHSVIVIGSDADLVLLGLATQKIRDFFVFVITPRQSAQVASRGPAETHRNSVNATTISVWQWIRVLDRLFPGETAPVRLDLALLLMMQGNDYVPKLRGSSFKSIWAAYKALKMRQGPMSGRYLLCGEQRTINLEFLYALMSSL------ENPLVPQLTKQLVEMYREASIRGQ-----------------EMARLAELESTRTGATETPDNDSISDVEQILYNGDLEKP---SPCKETT-------------------------KEPVIDMTDPDDMLEMVET----------PEGVSYDNDETMFDTENWLRMLLWALAMYVDGFCPDFYFTYPKPYGPSATDIVRWLQEIDGDPIPTLQPPMSVAPPLPPHAALLALIPSTAA 502          
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A2V3J5K0_9FLOR (5'-3' exoribonuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K0_9FLOR)

HSP 1 Score: 241 bits (614), Expect = 3.400e-65
Identity = 197/629 (31.32%), Postives = 285/629 (45.31%), Query Frame = 0
Query:   23 GIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRY--------GVS-----------ALHLSPGTKFMEDVASAMEYYAFQECTRPC-YEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFICSQTNTGS-----FRLSSIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALK-------KGKHRDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQMHELSKEDAER---SGGSHGPPVRGVKKWRSSTWVRGKEYSWLHTAAKERAAFHEAAAKLLEELVPDVHEKFLEQEKDRLLEQAQLDRDLEDIDSDLDDDLEGGNVRSSRWAGKKPLFDVQEYLTGVLWNLQMYIDGYXXXXXXXXXXXXXXXVSDILSFLQN-DSDSLAKVSPPVTQAPPLPAAIACLCMMPMTDAGKAFVPERLQPLLTPGSPLVEALKWKGDSSGLDIPKILRVV-----SEEAPEEL-RGFH 609
            GI GF KW +G FP  V      R  E +DHV  D+NQILH A+RKA +       IFR+++  LK C PRKSV FAFDG APLAKL  QR RR   +  S Y        GVS            L ++PG + +  V  ++EY+A+        Y  V   ISGA+VPGEGELK ID+ +    P S +SVV+VGGDAD++LQGLA   V+N F+  +   GS       + S+WE+ R  E  FP +S  VR D  +L +LNGNDY+PKVRG+S  R +  Y  LK        G  R   LV+ E R+++W     ++  +         G PV S+ + +       AG      V         E  +     E  ER   +G   G P+  +        V  ++ S+      E  ++ +++     E          ++E++ +     L                 GN  SS++      +D   ++  +LWN+QMY+DGY               +++IL++++N D D     +P     P LP   A   M  +    K  +P+ LQ +       V   K  G    +D+P ++        SE + EEL R FH
Sbjct:    2 GIIGFQKWLLGNFPDIVRVQQGARFGEYYDHVAFDINQILHQAVRKATNRQTLAAAIFRELDQILKNCIPRKSVFFAFDGPAPLAKLATQRRRRRQRRGASEYVSDYIDENGVSRKAKTVQPAIDGLEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVEIRISGADVPGEGELKLIDFCRTAQIP-STDSVVVVGGDADIVLQGLATVPVRNFFVYLRNFAGSRGRRQSYVISVWELTRIFERLFPNESSSVRLDFVLLAILNGNDYIPKVRGISLSRTWHRYLNLKLDSSGGRPGPFRGRSLVDAEKRTLNWPMFYALMDRV---------GVPVSSIAEAEQEKESTPAG------VPPRRKRRGKEGYVSYSDSEVGERIVYTGNEDGVPMDCL----DDDSVPTRDESFSENGVSETDSYEDSS-----EYNXXXXXXXFDEEQEHIQTLVTL----------------SGN--SSKF------YDTNRWVRALLWNIQMYVDGYCGDYSFRYGKPYGPPITEILNYIRNHDGDPFLHQAPVSNWRPLLPHQAA---MAVLPKQAKHLLPKPLQRIYDDP---VAVRKIFGSKDDVDVPSLIAETDRIPKSEFSSEELLRTFH 575          
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: I2CR78_NANGC (5'-3' exoribonuclease 1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR78_NANGC)

HSP 1 Score: 222 bits (565), Expect = 2.720e-60
Identity = 137/361 (37.95%), Postives = 200/361 (55.40%), Query Frame = 0
Query:   20 VEAGIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYEGVRFYISGANVPGEGELKCIDWLK-----------------------HMSNPGSEESVVIVGGDADLILQGLALSEVK--NTFICSQTNTGSFRLSSIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALK-KGKHRDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQ 352
            VE GI GF KWF G +   V+      Q   FDHV ID+NQ+ H+A RKA DEDHAIRR+ +++  TL+    +KSVV AFDG APLAK++ QR RR   K +++  +++LHLSPGT FM   A A+  +     E        +R+Y+S +  PGEGE+K +DW+                          +     ES+V+VGGDADL+LQGLAL  +   N FI     +G F   S+ + V  LET FPGQS  VR+D+ +L+++ GNDYL KVRG++F     +Y  +K K + +D F++  E ++ +W FL+    D+ A +           ++ + +  R PT   + N ++Q
Sbjct:   62 VEGGIYGFWKWFRGHYKEVVSKV-SSEQYAEFDHVLIDVNQLTHMAARKARDEDHAIRRLLKELGRTLRVLRAQKSVVIAFDGPAPLAKIITQRKRRAAEK-DAKTPLNSLHLSPGTSFMRRAAEAVIDFCHTRLESDLTPRRRIRYYVSCSESPGEGEVKLMDWINTYLLTHEDGRXXXXXXXXXXXXXKKAGRKDSESIVVVGGDADLVLQGLALPGLPDFNVFIPDVKRSGYF--VSLRQFVARLETDFPGQSHQVRTDMVLLLVMAGNDYLKKVRGLTFRSKLLAYNNVKRKPEFKDQFMLLAENKTFNWPFLQAFYDDLAARSF----------VDDLSVLLRGPTPAGVLNELMQ 408          
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A7S4KKW8_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KKW8_GUITH)

HSP 1 Score: 185 bits (469), Expect = 8.430e-48
Identity = 114/356 (32.02%), Postives = 176/356 (49.44%), Query Frame = 0
Query:   23 GIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQECT-RPCYEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFICSQTN-TGSFRLS-----SIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALK-KGKHRDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQMHELSKE 370
            G A   +W   +FP  V           FDHV  DMN +LH   R   +     +R+FR V+  L+   P KSVV  FDG  P+AK+  Q   RE   + +   + ++ ++PGT+FM +V      +  Q    R  Y  + FY+S ++V GEGELK ++W+       S++ ++ +GGD+DL +Q LAL      ++ ++ +  G  R+      S+ E+ + LET FP  SD +R DL +LI+ NGNDYLP ++  +    F  YT +K + K R  FL++G  ++  +EFL + L  + A         P++ L Q                 VQ+G L   VE    E S+E
Sbjct:   18 GKAASKRWLEASFPKCVIPISPRSPSFKFDHVLFDMNDMLHTCARNCKNSSAVCKRVFRQVDSYLRIFTPGKSVVLCFDGPGPIAKIPKQVESREKRTKVASSTLDSIDITPGTRFMSEVRELCFAHVVQSLEQRGGYRDISFYLSCSDVAGEGELKLVEWIHTFVESASKDRILFIGGDSDLTIQSLALRGHSQVYLLNRKDGVGLQRIKPMHFISLSELKKELETIFPDHSDIIRFDLLLLIIFNGNDYLPPLKHFNLQVSFEVYTLMKSQEKFRSRFLLDGREKTFDYEFLAEFLKQVDARLKTWKISNPIVELHQY----------------VQEGSLEYSVEDLQFEFSQE 357          
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A7S0E673_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E673_9CRYP)

HSP 1 Score: 176 bits (446), Expect = 2.720e-47
Identity = 84/172 (48.84%), Postives = 120/172 (69.77%), Query Frame = 0
Query:   49 ESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQECTRPC-YEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFI 219
            E F+HV  DMN +LH A R+A D +HAI +++++++ TL+   P KSVV AFDG  PLAKLL QR RR    ++S+Y +S LH++PGTKFM  +  A EYYA         +  V FYISG++V GEGE+K IDW+ ++ +  +++ ++IVGGDADL+LQGLA+  VK+ F+
Sbjct:    2 EEFEHVLFDMNGLLHTACRRAKDFEHAILKVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRSKSSKSSKYKLSGLHITPGTKFMHAMKQACEYYAALRLVASAKFRNVAFYISGSDVAGEGEIKIIDWIHNLLHSQNDDRLIIVGGDADLVLQGLAVLRVKDLFV 173          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZW9_9PHAE0.000e+064.83XRN_N domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836C8H5_9STRA3.360e-8429.46DRBM domain-containing protein n=1 Tax=Tribonema m... [more]
M1US37_CYAM12.280e-7332.09XRN_N domain-containing protein n=1 Tax=Cyanidiosc... [more]
A0A7S1TFG2_9RHOD8.550e-6729.44Hypothetical protein n=4 Tax=Compsopogon caeruleus... [more]
L1JQ07_GUITC2.500e-6648.97Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7J7IHE6_9RHOD1.190e-6529.79XRN_N domain-containing protein n=1 Tax=Cyanidioco... [more]
A0A2V3J5K0_9FLOR3.400e-6531.325'-3' exoribonuclease 1 n=1 Tax=Gracilariopsis cho... [more]
I2CR78_NANGC2.720e-6037.955'-3' exoribonuclease 1 (Fragment) n=1 Tax=Nannoch... [more]
A0A7S4KKW8_GUITH8.430e-4832.02Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
A0A7S0E673_9CRYP2.720e-4748.84Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004859Putative 5-3 exonucleasePFAMPF03159XRN_Ncoord: 130..214
e-value: 8.1E-17
score: 61.5
coord: 23..118
e-value: 6.4E-16
score: 58.5
NoneNo IPR availableGENE3D3.40.50.12390coord: 22..258
e-value: 8.1E-34
score: 119.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 629..643
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 661..691
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 659..805
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 627..647
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 697..711
IPR0270735'-3' exoribonucleasePANTHERPTHR123415'->3' EXORIBONUCLEASEcoord: 23..574
IPR0164945'-3' exoribonuclease 1PANTHERPTHR12341:SF75'-3' EXORIBONUCLEASE 1coord: 23..574

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig133contigP-littoralis_Contig133:103067..110659 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig133.30.2mRNA_P-littoralis_Contig133.30.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig133 102981..111428 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig133.30.2 ID=prot_P-littoralis_Contig133.30.2|Name=mRNA_P-littoralis_Contig133.30.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=819bp
MLGKTLVFVFLVLLLCQGVVEAGIAGFHKWFVGAFPGAVTNAWHPRQQES
FDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAF
DGSAPLAKLLVQRGRRENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYA
FQECTRPCYEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGG
DADLILQGLALSEVKNTFICSQTNTGSFRLSSIWEVVRALETSFPGQSDF
VRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALKKGKHRDNFLVNGEA
RSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSV
VQQGELGEDVEIQMHELSKEDAERSGGSHGPPVRGVKKWRSSTWVRGKEY
SWLHTAAKERAAFHEAAAKLLEELVPDVHEKFLEQEKDRLLEQAQLDRDL
EDIDSDLDDDLEGGNVRSSRWAGKKPLFDVQEYLTGVLWNLQMYIDGYVP
NYYWRYSPRYSPSVSDILSFLQNDSDSLAKVSPPVTQAPPLPAAIACLCM
MPMTDAGKAFVPERLQPLLTPGSPLVEALKWKGDSSGLDIPKILRVVSEE
APEELRGFHDGSRSSCGWKVVFLDLSAPQGEPPSPPPPSKDFPPLENSRR
CSAYKFKRIQATSLPATSTPRNLAWSSPSNPTWQQEPSILGQPYKTPFDK
DAEERGGGRGSRGRGGRGVRGGRGGGRAAQPKSVAWRKKTSTPRIRQGGG
AGRGSGGQLGVSGRTEDTGVPNYSRGAPAAEERKARPSPFPSSPRSDTRA
SMCCGGPALGRSQCRILL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004859Put_53exo
IPR0270735_3_exoribonuclease
IPR0164945_3_exoribonuclease_1