mRNA_P-littoralis_Contig133.30.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig133.30.2
Unique NamemRNA_P-littoralis_Contig133.30.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A6H5KZW9_9PHAE (XRN_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZW9_9PHAE)

HSP 1 Score: 987 bits (2552), Expect = 0.000e+0
Identity = 529/816 (64.83%), Postives = 622/816 (76.23%), Query Frame = 3
Query:  123 LLLCQGVV--EAGIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQECTRPCYEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFICSQTNTGSFRLSSIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALKKGKHRDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQMHELSKEDAERSGGSHGPPVRGVKKWRSSTWVRGKEYSW--LHTAAKERAAFHEAAAKLLEELVPDVHEKFLEQEKDRLLEQAQLDRDLEDIDSDLDDD--LEGGNVRSSRWAGKKPLFDVQEYLTGVLWNLQMYIDGYXXXXXXXXXXXXXXXVSDILSFLQNDS-DSLAKVSPPVTQAPPLPAAIACLCMMPMTDAGKAFVPERLQPLLTPGSPLVEALKWKGDSSGLDIPKILRVVSEEAPEELRGFHDGSRSSCGWKVVFLDLSAPQGEPPSPPPPSKDFPPLENSRRCSAYKFKRIQATSLPATSTPRNLAWSSPSNPTWQQEPSILGQPYKTPFDKDAEERGGGRGXXXXXXXXXXXXXXXGRAAQPKSVAWRKKTSTPRIRQGGGAGRGSGGQLGVSGRTEDTGVPNYSRGAP--AAEERKARPSPFPSSPRSDTR-ASMCCGGPALGRSQCRILL 2540
            LLLCQ ++  EAGI GFHKWFV  FP AVT+A    + ESFDHVCIDMNQILHVAMRKA DEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQR RREN KRNS+Y +SALHLSPGTKFM+DVASAMEYYAFQECTRPCY+GV+FYISGANVPGEGELKCIDWLKHM  P  +ES VIVGGDADLILQGLALSEVKNTFICSQT+ GS+RLSSIWEVVR+LE  FPGQS  VR DLAVLIMLNGNDYLPKVRGVSF RCF++Y ALK+GKHRDNFL++G+ +SI WEFL+D+L D+     AEA+GY  +SLEQMDLNNRYP AGS+F   VQQG+LG+ VEI++H+LS E +  SGG+        KKW+S TWVRGKEY++  LH   K++   H AA KLLEEL+PD++++FLEQEK R+LEQAQLD++ EDIDS+LD+D   E G  R SR  GK PLFDV+ +L GVLWNLQMYIDGY                +DI+S+++  S D LA ++ PV  APPLPA+IACLCM+PMTD GK+F+P+RLQPL+ PGSPL+EAL+W+G SSGLDI KIL+      P+EL  FHDG+ SSC WKVV+LDLSA Q  PP+PPPPSKDFPPL++SR  ++YKF+RIQ TS+ ATS PRNL WSS S+ + ++   +L  PYK   +   +  GG R                G AA PKS AWRKK+S PRIR+ G AG GS  + G +GR ED   P+  R  P   A + KARPSPFPSS R D+R +SMC G  A  RS CR+LL
Sbjct:    9 LLLCQAIICAEAGINGFHKWFVQEFPTAVTDA---SRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMDDVASAMEYYAFQECTRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKP--DESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRDNFLIDGDKKSICWEFLQDLLADMIPSIVAEAEGYLAVSLEQMDLNNRYPPAGSVFKMAVQQGKLGDGVEIEVHDLSDEVSGSSGGT--------KKWKSVTWVRGKEYTYHFLHVG-KKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLDEDSGAENGRERGSR-KGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQELSEFHDGAHSSCAWKVVYLDLSARQRTPPAPPPPSKDFPPLDSSRHSNSYKFQRIQVTSMSATSAPRNLPWSSASDSSSEEMQGVLDLPYKKALNGSGKPEGGRR---RRGSAGKGARGPRGGAAPPKSAAWRKKSSAPRIRKSGKAGEGSDARRGTNGRGEDA-APDLPRRPPPAVAADVKARPSPFPSSARPDSRRSSMCLGKLATRRSHCRLLL 805          
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A836C8H5_9STRA (DRBM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8H5_9STRA)

HSP 1 Score: 298 bits (763), Expect = 3.700e-82
Identity = 276/937 (29.46%), Postives = 381/937 (40.66%), Query Frame = 3
Query:  147 EAGIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQEC------------------------------------------------------------------------------------------------------------------------------TRPCYEG---------------------------VRFYISGANVPGEGELKCIDWLKHMSNP-------------------------------------GSEESVVIVGGDADLILQGLALSEVKNTFICSQTNTGSFRLSSIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALKKGKH-RDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQM--------HELSKEDAERSGGSHGPPVRGVKKWRSSTWVRGKEYSWLHTAAKERAAFHEAAAKLLEELVPDVHEKFL---EQEKDRLLEQAQLDRDLEDI---------------DSDLDDDLEGGNVRSS-----RW--AGKKPLFDVQEYLTGVLWNLQMYIDGYXXXXXXXXXXXXXXXVSDILSFLQN-----------DSDSLAKVSPPVTQAPPLPAAIACLCMMPMTDAGKAFVPERLQPLLTPGSPLVEALKWKGD----------SSGL-------DIPKILRVVSEEAPEELRGFHDGSRSSCGWKVV-FLDLSAPQG-EPPSPPPPSKDFPPLENSRRCSAYKFKRIQATSLPATSTPRNLAWSSPSNPTWQQEPS-----ILGQPYKTPF 2180
            EAGI GF KWF G F  +V  A  P Q++ FDHVC DMNQILHVA+R++A+E+ AI R F +++  LK   PR+SVVFAFDGSAPLAKLL QR RRE  +R  RY +SAL+++PGT FM   A AM YYA+                                                                                                                                  RP Y G                           V +Y+  A+V GEGELK +DW  H++                                       G EESVVIVGGDADL+LQGLALS+VKN F+ +     S R+ S+W+V R LE  FPG+S  +R+DL  L++LNGNDYLPKVRGVSF RCFR Y A K     + +F+++ E +  +W FL   L     G     +G          +  +    G     +++ G+                 +++  E+ E +G S   P  GV     S  V G   +     A ++ A   AA  +L+EL P+++E +L   ++   +LL  AQ  R                    D  LD DL G            W  A  K   DV+ YLTGVLWN+ MY DG+                 D+  +++                L  V+ PV++ P LP+ +ACL MM  +  G+  VP RL+ LL   SP+                   ++G+       DI  +L  V++  PE L GF +G R    W V+       P+G  P + PPP    PPL+   + S    K +   ++PATS+P   +W+  SN     +P+     +L   +K PF
Sbjct:   20 EAGIQGFSKWFKGVFHDSVM-AVQPGQRDQFDHVCFDMNQILHVAVRRSANEEQAIARTFTEISQVLKTLEPRRSVVFAFDGSAPLAKLLTQRARREGGRRAERYQMSALNITPGTDFMRSAAEAMRYYAYTRLPGGTARLPGGTYNHTLXXXXXXXXXXXXXXXXXXXXAGVCVHDDITPXXXXXXXXXXXXXXXXXXXXPDGTQASKFGPGDKVWLDLGEPGAPQWTGPWAIQGRKGADDLVLTHHKGGARKVVSAALVRP-YRGDPPPGPRGTREGVXXXXXXXXXXXXXXVTYYMGTADVLGEGELKILDWA-HLAGRRPRSLAALRTAXXXXXXXXXXXXXXXXXXXXXXAVAHGGEESVVIVGGDADLVLQGLALSKVKNLFVYASELKRSGRIVSLWQVTRQLEAMFPGESGGIRNDLIFLLVLNGNDYLPKVRGVSFGRCFRHYCAAKAAPGGQGSFIIDSERQRFNWPFLLRFLKFATMGAAMALQGPTPAQWVNAAVQKKVIRGGR--KKLIRGGQXXXXXXXXXXXXXXXVTYDVFSEEPEHNGDS---PRFGV-----SVAVAGTTLTVPAEHASQKDARRAAATLVLQELAPELYEDYLVARQRHDAQLLAAAQQRRXXXXXXXXXXXXXXXXXLADDXXLDLDLNGDESSDEYEYEPEWDRAPGKGGHDVKAYLTGVLWNIHMYQDGFAPDNYWRYGHRYAPSCHDMADWVEQRIALEASGADEQGQPLTDVASPVSRKPALPSDVACLAMM--SAEGRDLVPRRLRALLDADSPVGNMFAPPASXXXXXXXXQPAAGVVPQRREFDIDALLAAVNDHCPEALNGFAEG-RQEVKWTVIQHASQPLPRGCTPLNLPPP---IPPLDRFLKVSPDTVKCV---TMPATSSPPGRSWAG-SNWAGAADPAAGAIPLLSVKFKKPF 933          
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: M1US37_CYAM1 (XRN_N domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1US37_CYAM1)

HSP 1 Score: 263 bits (672), Expect = 9.430e-72
Identity = 181/564 (32.09%), Postives = 271/564 (48.05%), Query Frame = 3
Query:  153 GIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRR--------ENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFICSQTNTGSFR-----------------LSSIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALK--KGKHRDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQMHELSKEDAERSGGSHGPPVRGVKKWRSSTWVRGKEYSWLHTAAKERAAFHEAAAKLLEELVPDVHEKFLEQEKDRLLEQAQLDRDLEDIDSDLDDDLEGGNVRSSRWAGKKPLFDVQEYLTGVLWNLQMYIDGYXXXXXXXXXXXXXXXVSDILSFL-QNDSDSLAKVSPPVTQAPPLPAAIACLCMMPMTDA 1754
            GIAGF +W++  FP  V         E FDHV  D+NQ++H+A R A + D    R+FR ++  L+ C P+KSV  AFDG APLAKL+ Q+ RR           KR  R GV  L LSPGT+ M+    A+E+Y     +  R  Y+ VRF +SG  VPGEGE+K ID++    +P  + SVV++G DADL++ GLA  +V+N F+   T   + +                 + S+W+ +R L+  FPG++  +R DL V++M+ GNDYLPK+RG SF+  + +Y ALK  KG  R  +LV  E RS  WEFL  ++  +           P ++ E +++       G     + Q G    +        SK+  ER+                           +H +  E     +AA   +   V D  +         +LE+  +   +      +DDD              + L+D +E+L  +LW L MYIDG+                SDI+ +L +ND D L ++ PP++ APPLP   A L ++P + A
Sbjct:    2 GIAGFQRWYLENFPSTVVTVTGESAPEHFDHVLFDLNQLIHLAARVARNRDQFFIRLFRWLDNILRLCVPKKSVFIAFDGPAPLAKLVTQKRRRVLESRKLHRTRKRKRRCGVDVLSLSPGTELMQLTLQAVEFYVCSRLQSKRHLYQNVRFVVSGPTVPGEGEIKIIDYIHRYVDP--QHSVVVIGSDADLVVLGLATQKVRNFFVFVITPRANMQDAPEHGTAQKRQAISAIVISVWQWIRVLDRFFPGETPSLRLDLVVMLMMQGNDYLPKLRGTSFNSIWEAYKALKLDKGPMRGKYLVCREQRSFDWEFLYALMKRLINPLV------PNLTKELIEMYREASIRGQEALRLAQAGNASVEASSSCESESKDSVERN---------------------------VHPSDLEDGTEPDAAHGEISADVTDPED---------ILEKVDIPEGIS-----VDDD--------------EKLYDTEEWLRTLLWALAMYIDGFCPDFYHTYSRAYGPSASDIVRWLKENDGDPLLQLQPPLSVAPPLPPHAALLALVPASAA 502          
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A7S1TFG2_9RHOD (Hypothetical protein n=4 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFG2_9RHOD)

HSP 1 Score: 244 bits (623), Expect = 1.960e-65
Identity = 204/693 (29.44%), Postives = 319/693 (46.03%), Query Frame = 3
Query:  240 DHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHL-----SPGTKFMEDVASAMEYYAFQECTR----PCYEGVRFYISGANVPGEGELKCIDWLKHM---SNPGSE------ESVVIVGGDADLILQGLALSEVKNTFICSQTNTGSFRLSSIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALKKGKHR--DNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQMHELSKEDAERSGGSHGPPVRGVKKWRSSTWVRGKEYSWLHTAAKERAAFHEAAAKLLEELVPDVHEKFLEQEKDRLLEQAQLDRDLEDIDSDLDDDLEGGNVRSSRWAGKKPLFDVQEYLTGVLWNLQMYIDGYXXXXXXXXXXXXXXXVSDILSFL-------QNDS----------------DSLAKVSPPVTQAPPLPAAIACLCMMPMTDAGKAFVPERLQPLLTPGSPLVEALKWKGDSSGL-DIPKILRVVSEEAPEELRGFHDGSRSSCGWKVVFLDLSAPQGEPPSPPPPSKDFPPLENSRRCSAYKFKRIQATSLPATSTPRNLAWSSPSNPTWQQEPSILGQPYKTPFDK 2186
            DHVC D+NQ++H+A+RK+ +E+  + R+FR+++  LK+C P++SV FAFDG  P+AKLL QR RR NP  + R  ++  H+     +PGT+ M  +  A++Y+A   C+R      Y+ V   ISG +VPGEGE+K  DWL         G++      ESV+++GGDAD++LQGLA +  ++ F+ +Q+      + SI  +V+ALE +FPG+SD VR D  VL ++NGNDYLPKVRGV FD  +  Y A+KKG+ +    +L++   R+ +W FL  +L  I +         P + L +  L    P+         +  E   DV    +E+                                   L+T     +A   AA       +PDV +     E+D     A        +  D + D E     ++       LFD++ +L G+LWN+QMY+DG+                + I++++       Q +S                D L  +  P++   PL    A + M+P   +    +P  +Q L   G+      + + DS  L ++ K+L  V +  P  L    +  R+  G   +    S P+     PPPP   F     S R  ++  + +  T    T+ P  L W+S S     Q  S   QP K  F K
Sbjct:   23 DHVCFDLNQVIHMALRKSPNEEKLVIRLFRNIDAALKQCIPKRSVYFAFDGPGPMAKLLTQRVRRSNPANSQRKVLANRHIDPNAITPGTELMYMLQDALDYFA---CSRLEGDMKYDKVDMRISGPDVPGEGEVKIFDWLNSFVARREAGTQVSSIVTESVIVIGGDADIVLQGLATTSFRDLFVYAQSRRDEGTVISISLLVKALEDNFPGESDRVRLDFIVLCLMNGNDYLPKVRGVGFDSLWNGYIAIKKGREQFQGQYLLDSTRRTFNWPFLVALLETIRSVVIE-----PHVLLAEKSLQVEEPS---------RMNEEEHDVPPDPNEII----------------------------------LYTGDMTASASTSAA-------IPDVDDD----EEDH----ADXXXXXXSVGDDGEYDYESAYDETNTGESPNRLFDIELFLRGILWNVQMYVDGFCPDYTYVYPELYAPSPTAIMNWVKAHDGTVQTNSIDTTPHFSARLDDILGDPLFSIQGPLSTVQPLEPHKAAIAMLP--SSASHLLPGPIQEL---GASCTALDRARRDSMYLRELSKVLDAV-DSIPRSLYTRAELRRTRFGNVHLIRKTSRPRAASQLPPPPVARF----RSLRVPSHLNRMLVTT----TTAPPCLRWTSAS-----QVISRGSQPGKRAFSK 630          
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: L1JQ07_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQ07_GUITC)

HSP 1 Score: 230 bits (587), Expect = 3.480e-65
Identity = 119/243 (48.97%), Postives = 162/243 (66.67%), Query Frame = 3
Query:  258 MNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQECTRPC-YEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFICSQTNTGSFRLS-------------SIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALK 944
            MN +LH A RKA D +HAI R++++++ TL+   P KSVV AFDG  PLAKLL QR RR    + S+Y +S LH++PGTKFM+ +  A EYYA         ++ V FYISGA+V GEGE+K I+W+ ++    ++E ++IVGGDADL+LQGLA+  VK+ F+ +  +      S             S+WEVVR+LE  FPGQS  VR+DL VL+++NGNDYLPKVRG SF+  FR+Y  +K
Sbjct:    1 MNGLLHTACRKAKDFEHAILRVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRNKSSKASKYKLSGLHITPGTKFMQTMREACEYYAALRLVASAKFKNVAFYISGADVAGEGEIKIIEWIHNLLQNQNDEKIIIVGGDADLVLQGLAVLRVKDLFVYAGKDMSQHPSSRKAKGKSSPSIVLSMWEVVRSLERLFPGQSQAVRADLIVLMIMNGNDYLPKVRGGSFESFFRAYKKVK 243          
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A7J7IHE6_9RHOD (XRN_N domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IHE6_9RHOD)

HSP 1 Score: 242 bits (617), Expect = 2.530e-64
Identity = 168/564 (29.79%), Postives = 268/564 (47.52%), Query Frame = 3
Query:  153 GIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRN--------SRYGVSALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFICSQTNTGSFRLSS-----------------IWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALK--KGKHRDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQMHELSKEDAERSGGSHGPPVRGVKKWRSSTWVRGKEYSWLHTAAKERAAFHEAAAKLLEELVPDVHEKFLEQEKDRLLEQAQLDRDLEDIDSDLDDDLEGGNVRSSRWAGKKPLFDVQEYLTGVLWNLQMYIDGYXXXXXXXXXXXXXXXVSDILSFLQN-DSDSLAKVSPPVTQAPPLPAAIACLCMMPMTDA 1754
            GIAGF +WF+  FP   T        ESFDHV  D+NQ++H+A R A + D    R++R ++  L+ C P++SV  AFDG APLAKL+ Q+ RR    R          R GV  L LSPGT+ M+    A+E+Y     +  R  Y  +RF +SG  VPGEGE+K ID++     P    SV+++G DADL+L GLA  ++++ F+   T   S +++S                 +W+ +R L+  FPG++  VR DLA+L+M+ GNDY+PK+RG SF   + +Y ALK  +G     +L+ GE R+I+ EFL  +++ +      E    P ++ + +++       G                  +M  L++ ++ R+G +  P    +       +    E     +  KE                           K+ +++    D  LE +++               +   + +FD + +L  +LW L MY+DG+                +DI+ +LQ  D D +  + PP++ APPLP   A L ++P T A
Sbjct:    2 GIAGFQRWFLETFPSTATTITDETLPESFDHVLFDLNQLIHLAARVAKNRDQFFIRLYRWLDKVLRLCVPKESVFIAFDGPAPLAKLVTQKRRRVLEARKLTRKLEPKKRCGVDVLSLSPGTELMQMTLQAIEFYVCSRLQSKRNLYRNLRFVVSGPTVPGEGEIKIIDYIHRCVEP--HHSVIVIGSDADLVLLGLATQKIRDFFVFVITPRQSAQVASRGPAETHRNSVNATTISVWQWIRVLDRLFPGETAPVRLDLALLLMMQGNDYVPKLRGSSFKSIWAAYKALKMRQGPMSGRYLLCGEQRTINLEFLYALMSSL------ENPLVPQLTKQLVEMYREASIRGQ-----------------EMARLAELESTRTGATETPDNDSISDVEQILYNGDLEKP---SPCKETT-------------------------KEPVIDMTDPDDMLEMVET----------PEGVSYDNDETMFDTENWLRMLLWALAMYVDGFCPDFYFTYPKPYGPSATDIVRWLQEIDGDPIPTLQPPMSVAPPLPPHAALLALIPSTAA 502          
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A2V3J5K0_9FLOR (5'-3' exoribonuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K0_9FLOR)

HSP 1 Score: 241 bits (614), Expect = 6.980e-64
Identity = 197/629 (31.32%), Postives = 285/629 (45.31%), Query Frame = 3
Query:  153 GIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRY--------GVS-----------ALHLSPGTKFMEDVASAMEYYAFQECTRPC-YEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFICSQTNTGS-----FRLSSIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALK-------KGKHRDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQMHELSKEDAER---SGGSHGPPVRGVKKWRSSTWVRGKEYSWLHTAAKERAAFHEAAAKLLEELVPDVHEKFLEQEKDRLLEQAQLDRDLEDIDSDLDDDLEGGNVRSSRWAGKKPLFDVQEYLTGVLWNLQMYIDGYXXXXXXXXXXXXXXXVSDILSFLQN-DSDSLAKVSPPVTQAPPLPAAIACLCMMPMTDAGKAFVPERLQPLLTPGSPLVEALKWKGDSSGLDIPKILRVV-----SEEAPEEL-RGFH 1913
            GI GF KW +G FP  V      R  E +DHV  D+NQILH A+RKA +       IFR+++  LK C PRKSV FAFDG APLAKL  QR RR   +  S Y        GVS            L ++PG + +  V  ++EY+A+        Y  V   ISGA+VPGEGELK ID+ +    P S +SVV+VGGDAD++LQGLA   V+N F+  +   GS       + S+WE+ R  E  FP +S  VR D  +L +LNGNDY+PKVRG+S  R +  Y  LK        G  R   LV+ E R+++W     ++  +         G PV S+ + +       AG      V         E  +     E  ER   +G   G P+  +        V  ++ S+      E  ++ +++     E          ++E++ +     L                 GN  SS++      +D   ++  +LWN+QMY+DGY               +++IL++++N D D     +P     P LP   A   M  +    K  +P+ LQ +       V   K  G    +D+P ++        SE + EEL R FH
Sbjct:    2 GIIGFQKWLLGNFPDIVRVQQGARFGEYYDHVAFDINQILHQAVRKATNRQTLAAAIFRELDQILKNCIPRKSVFFAFDGPAPLAKLATQRRRRRQRRGASEYVSDYIDENGVSRKAKTVQPAIDGLEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVEIRISGADVPGEGELKLIDFCRTAQIP-STDSVVVVGGDADIVLQGLATVPVRNFFVYLRNFAGSRGRRQSYVISVWELTRIFERLFPNESSSVRLDFVLLAILNGNDYIPKVRGISLSRTWHRYLNLKLDSSGGRPGPFRGRSLVDAEKRTLNWPMFYALMDRV---------GVPVSSIAEAEQEKESTPAG------VPPRRKRRGKEGYVSYSDSEVGERIVYTGNEDGVPMDCL----DDDSVPTRDESFSENGVSETDSYEDSS-----EYNXXXXXXXFDEEQEHIQTLVTL----------------SGN--SSKF------YDTNRWVRALLWNIQMYVDGYCGDYSFRYGKPYGPPITEILNYIRNHDGDPFLHQAPVSNWRPLLPHQAA---MAVLPKQAKHLLPKPLQRIYDDP---VAVRKIFGSKDDVDVPSLIAETDRIPKSEFSSEELLRTFH 575          
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: I2CR78_NANGC (5'-3' exoribonuclease 1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR78_NANGC)

HSP 1 Score: 222 bits (565), Expect = 2.890e-59
Identity = 137/361 (37.95%), Postives = 200/361 (55.40%), Query Frame = 3
Query:  144 VEAGIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYEGVRFYISGANVPGEGELKCIDWLK-----------------------HMSNPGSEESVVIVGGDADLILQGLALSEVK--NTFICSQTNTGSFRLSSIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALK-KGKHRDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQ 1142
            VE GI GF KWF G +   V+      Q   FDHV ID+NQ+ H+A RKA DEDHAIRR+ +++  TL+    +KSVV AFDG APLAK++ QR RR   K +++  +++LHLSPGT FM   A A+  +     E        +R+Y+S +  PGEGE+K +DW+                          +     ES+V+VGGDADL+LQGLAL  +   N FI     +G F   S+ + V  LET FPGQS  VR+D+ +L+++ GNDYL KVRG++F     +Y  +K K + +D F++  E ++ +W FL+    D+ A +           ++ + +  R PT   + N ++Q
Sbjct:   62 VEGGIYGFWKWFRGHYKEVVSKV-SSEQYAEFDHVLIDVNQLTHMAARKARDEDHAIRRLLKELGRTLRVLRAQKSVVIAFDGPAPLAKIITQRKRRAAEK-DAKTPLNSLHLSPGTSFMRRAAEAVIDFCHTRLESDLTPRRRIRYYVSCSESPGEGEVKLMDWINTYLLTHEDGRXXXXXXXXXXXXXKKAGRKDSESIVVVGGDADLVLQGLALPGLPDFNVFIPDVKRSGYF--VSLRQFVARLETDFPGQSHQVRTDMVLLLVMAGNDYLKKVRGLTFRSKLLAYNNVKRKPEFKDQFMLLAENKTFNWPFLQAFYDDLAARSF----------VDDLSVLLRGPTPAGVLNELMQ 408          
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A7S4KKW8_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KKW8_GUITH)

HSP 1 Score: 185 bits (469), Expect = 2.710e-47
Identity = 114/356 (32.02%), Postives = 176/356 (49.44%), Query Frame = 3
Query:  153 GIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQECT-RPCYEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFICSQTN-TGSFRLS-----SIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALK-KGKHRDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQMHELSKE 1196
            G A   +W   +FP  V           FDHV  DMN +LH   R   +     +R+FR V+  L+   P KSVV  FDG  P+AK+  Q   RE   + +   + ++ ++PGT+FM +V      +  Q    R  Y  + FY+S ++V GEGELK ++W+       S++ ++ +GGD+DL +Q LAL      ++ ++ +  G  R+      S+ E+ + LET FP  SD +R DL +LI+ NGNDYLP ++  +    F  YT +K + K R  FL++G  ++  +EFL + L  + A         P++ L Q                 VQ+G L   VE    E S+E
Sbjct:   18 GKAASKRWLEASFPKCVIPISPRSPSFKFDHVLFDMNDMLHTCARNCKNSSAVCKRVFRQVDSYLRIFTPGKSVVLCFDGPGPIAKIPKQVESREKRTKVASSTLDSIDITPGTRFMSEVRELCFAHVVQSLEQRGGYRDISFYLSCSDVAGEGELKLVEWIHTFVESASKDRILFIGGDSDLTIQSLALRGHSQVYLLNRKDGVGLQRIKPMHFISLSELKKELETIFPDHSDIIRFDLLLLIIFNGNDYLPPLKHFNLQVSFEVYTLMKSQEKFRSRFLLDGREKTFDYEFLAEFLKQVDARLKTWKISNPIVELHQY----------------VQEGSLEYSVEDLQFEFSQE 357          
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A7S0E673_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E673_9CRYP)

HSP 1 Score: 176 bits (446), Expect = 6.620e-47
Identity = 84/172 (48.84%), Postives = 120/172 (69.77%), Query Frame = 3
Query:  231 ESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQECTRPC-YEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFI 743
            E F+HV  DMN +LH A R+A D +HAI +++++++ TL+   P KSVV AFDG  PLAKLL QR RR    ++S+Y +S LH++PGTKFM  +  A EYYA         +  V FYISG++V GEGE+K IDW+ ++ +  +++ ++IVGGDADL+LQGLA+  VK+ F+
Sbjct:    2 EEFEHVLFDMNGLLHTACRRAKDFEHAILKVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRSKSSKSSKYKLSGLHITPGTKFMHAMKQACEYYAALRLVASAKFRNVAFYISGSDVAGEGEIKIIDWIHNLLHSQNDDRLIIVGGDADLVLQGLAVLRVKDLFV 173          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZW9_9PHAE0.000e+064.83XRN_N domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836C8H5_9STRA3.700e-8229.46DRBM domain-containing protein n=1 Tax=Tribonema m... [more]
M1US37_CYAM19.430e-7232.09XRN_N domain-containing protein n=1 Tax=Cyanidiosc... [more]
A0A7S1TFG2_9RHOD1.960e-6529.44Hypothetical protein n=4 Tax=Compsopogon caeruleus... [more]
L1JQ07_GUITC3.480e-6548.97Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7J7IHE6_9RHOD2.530e-6429.79XRN_N domain-containing protein n=1 Tax=Cyanidioco... [more]
A0A2V3J5K0_9FLOR6.980e-6431.325'-3' exoribonuclease 1 n=1 Tax=Gracilariopsis cho... [more]
I2CR78_NANGC2.890e-5937.955'-3' exoribonuclease 1 (Fragment) n=1 Tax=Nannoch... [more]
A0A7S4KKW8_GUITH2.710e-4732.02Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
A0A7S0E673_9CRYP6.620e-4748.84Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig133contigP-littoralis_Contig133:102981..111428 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G8V1
PFAMsXRN_N
Model size3312
Max annot lvl2759|Eukaryota
KEGG koko:K12618
KEGG Pathwayko03008,ko03018,map03008,map03018
Hectar predicted targeting categorysignal peptide
Exons11
Evalue0.0
EggNOG OGsCOG5049@1|root,KOG2045@2759|Eukaryota
Description5'-3' exonuclease activity
Cds size2457
COG categoryADL
BRITEko00000,ko00001,ko01000,ko03009,ko03016,ko03019,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig133.30.2prot_P-littoralis_Contig133.30.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig133 103067..110659 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789609.2626743-UTR-P-littoralis_Contig133:102980..1030661680789609.2626743-UTR-P-littoralis_Contig133:102980..103066Pylaiella littoralis U1_48UTRP-littoralis_Contig133 102981..103066 +
1680789609.3854349-UTR-P-littoralis_Contig133:110659..1114281680789609.3854349-UTR-P-littoralis_Contig133:110659..111428Pylaiella littoralis U1_48UTRP-littoralis_Contig133 110660..111428 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789609.275249-CDS-P-littoralis_Contig133:103066..1031171680789609.275249-CDS-P-littoralis_Contig133:103066..103117Pylaiella littoralis U1_48CDSP-littoralis_Contig133 103067..103117 +
1680789609.286304-CDS-P-littoralis_Contig133:103555..1036841680789609.286304-CDS-P-littoralis_Contig133:103555..103684Pylaiella littoralis U1_48CDSP-littoralis_Contig133 103556..103684 +
1680789609.3000078-CDS-P-littoralis_Contig133:105299..1054271680789609.3000078-CDS-P-littoralis_Contig133:105299..105427Pylaiella littoralis U1_48CDSP-littoralis_Contig133 105300..105427 +
1680789609.3085253-CDS-P-littoralis_Contig133:105687..1058521680789609.3085253-CDS-P-littoralis_Contig133:105687..105852Pylaiella littoralis U1_48CDSP-littoralis_Contig133 105688..105852 +
1680789609.3210676-CDS-P-littoralis_Contig133:106483..1066491680789609.3210676-CDS-P-littoralis_Contig133:106483..106649Pylaiella littoralis U1_48CDSP-littoralis_Contig133 106484..106649 +
1680789609.3301394-CDS-P-littoralis_Contig133:106824..1070571680789609.3301394-CDS-P-littoralis_Contig133:106824..107057Pylaiella littoralis U1_48CDSP-littoralis_Contig133 106825..107057 +
1680789609.3385558-CDS-P-littoralis_Contig133:107392..1075671680789609.3385558-CDS-P-littoralis_Contig133:107392..107567Pylaiella littoralis U1_48CDSP-littoralis_Contig133 107393..107567 +
1680789609.3501866-CDS-P-littoralis_Contig133:108018..1082501680789609.3501866-CDS-P-littoralis_Contig133:108018..108250Pylaiella littoralis U1_48CDSP-littoralis_Contig133 108019..108250 +
1680789609.3583996-CDS-P-littoralis_Contig133:108547..1086331680789609.3583996-CDS-P-littoralis_Contig133:108547..108633Pylaiella littoralis U1_48CDSP-littoralis_Contig133 108548..108633 +
1680789609.3662362-CDS-P-littoralis_Contig133:109205..1096841680789609.3662362-CDS-P-littoralis_Contig133:109205..109684Pylaiella littoralis U1_48CDSP-littoralis_Contig133 109206..109684 +
1680789609.3773444-CDS-P-littoralis_Contig133:110046..1106591680789609.3773444-CDS-P-littoralis_Contig133:110046..110659Pylaiella littoralis U1_48CDSP-littoralis_Contig133 110047..110659 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig133.30.2

>prot_P-littoralis_Contig133.30.2 ID=prot_P-littoralis_Contig133.30.2|Name=mRNA_P-littoralis_Contig133.30.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=819bp
MLGKTLVFVFLVLLLCQGVVEAGIAGFHKWFVGAFPGAVTNAWHPRQQES
FDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAF
DGSAPLAKLLVQRGRRENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYA
FQECTRPCYEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGG
DADLILQGLALSEVKNTFICSQTNTGSFRLSSIWEVVRALETSFPGQSDF
VRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALKKGKHRDNFLVNGEA
RSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSV
VQQGELGEDVEIQMHELSKEDAERSGGSHGPPVRGVKKWRSSTWVRGKEY
SWLHTAAKERAAFHEAAAKLLEELVPDVHEKFLEQEKDRLLEQAQLDRDL
EDIDSDLDDDLEGGNVRSSRWAGKKPLFDVQEYLTGVLWNLQMYIDGYVP
NYYWRYSPRYSPSVSDILSFLQNDSDSLAKVSPPVTQAPPLPAAIACLCM
MPMTDAGKAFVPERLQPLLTPGSPLVEALKWKGDSSGLDIPKILRVVSEE
APEELRGFHDGSRSSCGWKVVFLDLSAPQGEPPSPPPPSKDFPPLENSRR
CSAYKFKRIQATSLPATSTPRNLAWSSPSNPTWQQEPSILGQPYKTPFDK
DAEERGGGRGSRGRGGRGVRGGRGGGRAAQPKSVAWRKKTSTPRIRQGGG
AGRGSGGQLGVSGRTEDTGVPNYSRGAPAAEERKARPSPFPSSPRSDTRA
SMCCGGPALGRSQCRILL*
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mRNA from alignment at P-littoralis_Contig133:102981..111428+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig133.30.2 ID=mRNA_P-littoralis_Contig133.30.2|Name=mRNA_P-littoralis_Contig133.30.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8448bp|location=Sequence derived from alignment at P-littoralis_Contig133:102981..111428+ (Pylaiella littoralis U1_48)
CCAGAGTTTAGACAGGACGTTCGCAGCAGTTGATCTACCCTCAACATCAT CACGCATCTGCCGGTCCCGGTCTGGGACTGATATTGATGCTTGGGAAGAC CCTCGTCTTCGTATTCTTGGTACTACTGCTGTGTCAGGTGCTGTTATTCA CCAACACAGAGACAGATCGAATGTGTACGAAAACACAAAACCTGGTACAG CAGACAAGAAGCACATGAACTTGGAATTTTCAATTTTCCACATCTTCCAT GTTCATATCATCGTCCTTACTTGTACTGCTGTACGAAGGCTGCTTCTGCT TTCTCAAGGAGATGTGTGCAGCAGAGTCTCGAAGGGGTCTTTTGTTTCAC GTGTTTCTGTTGGTTGTTGACGATCTTAAAGGTCCAGCCTCTGATAAGTA ATATCGTTGTCGCTGATGGGATACATTGCTTTCTGGTGTGCACCTGCCCT GTTCTGGAACATGATATTATACGGAGTACGTGATACGTACCCGCGGTCAT GCGGCTGTAACTGTCGTACTTGTACATATGGTATCATACCTTCACCTTCA CGTTGCGCGATTTTGTCTGGCGCAGGGCGTTGTGGAAGCTGGTATCGCTG GGTTCCACAAGTGGTTCGTGGGAGCCTTCCCGGGAGCTGTCACGAACGCC TGGCACCCCAGACAGCAGGAAAGTTTCGATCATGTCTGTATCGACATGAA CCAGGTGAGGACATTCTAGTTTTCCGCTATGATAGAGGGTGCTTCGTCAA ACACAGCACACCAGGAAGCCAGGTACTTCGTTTCTTGTGCCATGGTACCA ACTTAGAAAACCAGACTTGTACGAGTAGCTACAATACTGAAAACTGGTAA ATTCGGCGGGAGAAAGAGACAGCCAAACCAAACTCGCGATAAAAATGTCC TGGTACAGCAGTACGAAGCACTTCAGTACTGGAGTGGTAAGTAGTACCAG TCGTCTCTTACTGCTCTGTTATTTGGTCCCGTGTCTTTTCTCCTGAGGTA CCCCCCCCGCCCAAATAACAGAGATCCCAAACGGTTGAAAACTCTACTTC TTGAGCACAACAGGAGATAGCACCAAGCAGAAACTCGATCCCTGGGACAC CAATCGAGACTATAACTGTTGGAGGGTACGCTCCAGTGTTCTCAGGTTGG CCACAGGAAATTTGGTAGGTGTGGGCTTTGGCTGTGGCGAGGTTTCGGCG GCGGAGTGGGTTGAGGTAGGACAGTTCGGTGGAAAGAAAACGCTGTCCGA GCCTGTTTTTTGGCCGGAAAAACAAGAGCGAAGTATTTTATTCTTTTTCA TCTGTCTTTCCAACTCCAACAAACCGCCGCCAAAATCTTGCCACAGCCCG AACCCACTGCCACCAAACTTCCTGTGGCCAACTTGAGAACATAGGAGCAC ACGCTCCATCAGGTTCGATCGGCATCTGTGTCCTAGGGGTCGAGTTCTGA TTGGTGCTGTCGCATGATGTGTGCAACAGAGCTGTTTGTGGGTGGGGGGG GTAGGGGGGTTCTCTGGTTGGATTCTTGCAGGGGGGTCAAAACGCCAGGC CAAAATAACGTTGACCGTAAGAAACAGCCTAAGGCAAGCACCGCAGAGGA AGGTGAAAAAAAATATGTGTTGACCTTCCCTCCTGCTGTGTGCCCCAGGC TGATGCGCACGCATGCACCAAAAAAAGTGCATCATATCCTACTATCCTAC TAATGCTGTAGCGCTCAGAATGGCGGGGATGACAACACACACATATCATA CGTGAAACAACGTCGTATGCAAAGGCAGAGGAAACGGCACTGGTGATCGC GACGAGCACAAGGAGAGAAGTTGGAGGCGTTAGTGGTGGGGCAAGCAGTA TTATCGTCATACATGTCGTGTGATCGTTACGTGAAGAGTCACTACGCGTA GAATGAGTCGAGAGATTATCTCCCTGAACGATGGGTCGACCGTGTCGTCC CAACGTACGCGGGAAGGGGACCGTCTATCATAGCGGGATATTTCGTACAA ATTTCAGCTCTTCGTCCGCTCACACCCGAACAAGTGGAATGCACGGCAGT TTTTCAAGCCTCCTCTGTTCTTGCGGGTGTCTGCAGGTACTTGTGTTTGC TCTTTGGTGAAGGGCTGCAGCCGTACTTCGTACTCGTCAAGAGTTACTCG CTTCTGTGATCATATCGTACAGAGAGTTTGTAACGACAAACTCTAGGCGC GGAAGTGTCGTACAGCATCATAGCGTGACATGTCTCTGATCGACACCCCT GACTCATGGTCGACTTTATTTGCTGCTGTGTTCCGGCCGGTGAAACTCAT CAAAACTATCACATCGTAGATACTCCACGTAGCGATGCGCAAGGCTGCAG ACGAGGACCACGCCATCCGTCGCATTTTCAGGGACGTTAACCTGACCCTC AAGCGTTGCCCGCCTCGCAAGAGTGTTGTCTTCGCGTTCGACGGGAGGTG AGATTCAGGCTCGTACATTATACAGGTACATTCCGTTTCGTTTCATTTCG GTCGTGTACAATATGCCCATGTACACACGTTGCCCCGTTTTTTTTTTGAG ATACCGAAACCAACATCGGCCGCATACATGGAGGCCACTCGTGAACAACA ACGGTTGTAGCAGTTGTTACTGACGAGGCCGATTTGGCGTACCCCCCCTC TGTCTCGATCTATCTGCCGTACCAACCCGTCTGTCTCTGTTGCACCGCCC CACACAGCGCGCCGCTTGCAAAGCTTCTTGTCCAGCGTGGTCGGCGGGAG AATCCCAAGCGAAACTCAAGATATGGCGTGAGCGCTCTCCACCTCTCTCC CGGCACAAAGTTTATGGAAGACGTGGCGAGTGCAATGGAGTACTATGCAT TTCAGGAGTGCACGCGGCCTTGGTGGGTGCCTTGAGTTGTCTACTGTTCA GGGTTATGCGGCCGGCCGGTGCCTTCCGCTACAAGAAGAAGAGAGTCGAT AAGCAATACGGATGGCTCGTTGGAAATAGTTTTGATTTCAAGCACCGTCC GTGCAAGCGGGTATCCTTCAATCCTACCCCGTGTACCTCATGAATGATGT TGAGCTGTACAGAAAAAAATCTTCTGGAACATAGAAATAAACACACGCTA GTATCTCATTTGGCCAACCGCCCGGACTTGGAGTTTCTGTTGCCGAAAGT GTGTTTTTTTAAGCAGTTCAAAGAAGCCCAAAACAAAGAGAAGGCTTCTG TAGAAAAATGAAATTTAAACTTCGGTCAGTGATACATCGAAGTACATCAT TTTAGGCCAGGCGAGAGAGTTATCCGACGAAATTAGCACGTAAACGAAAG AGCAGCGGGCGGAGAGACAATTATGAGTCCATGGATGTCGCTTTAAAGCA AAAGAGAAGACAGTTTACTGGAGCTCAGCATCTACAATGTACTTCGAAGT ACCAGTTTATTTTAGTAGTGCTGGTATTGTTGTATTGTTGCAGTCCCCCC GCACCCGTCTGATCATTCCCGCCGCCGCTGGTCACGTCATTAACTTGCTG CAGCTACGAAGGCGTCAGGTTCTATATTTCTGGGGCAAACGTGCCGGGTG AAGGAGAGCTGAAGTGCATAGATTGGCTTAAGCACATGTCAAATCCAGGC TCAGAGGAGAGTGTTGTGATTGTCGGCGGAGATGCCGATCTCATACTTCA GGGGCTTGCCCTCAGTGAGGTCAGTGCACAGCAATACTGCTGTTGCTTTC AACCCAACATTTGTACAAGATTGATATGCATATATGCTACGACAAACAGA GTAGCAGTCGAAGGAGGAATCAAGATGTCGATTCAATCTCCCCGTTCATT GTTGGCCCGCCGCTCTGCCCCGTGCACCCTCCCTGACTTGCCAGGTGAAG AACACGTTCATCTGTTCCCAGACAAACACTGGCTCTTTCCGCCTTTCGTC CATCTGGGAAGTGGTTCGCGCGTTGGAGACGTCGTTCCCGGGCCAATCGG ACTTTGTCAGGAGTGATCTGGCGGTGTTAATCATGCTCAACGGGAATGAC TACCTTCCGAAGGTCAGGGGGGTTTCCTTCGACCGCTGTTTCCGGTCTTA CACTGCTCTCAAGAAGGGAAAGCACCGGTGAGCTTTGCTTTTTTCGGCCG GAAAACCCCGTGTGCATTTGACGAGTGAGTTGTATGGCCTTAGAGTTGTT CTTGCGTCAGCAGGGCCCCTGAGTGCGTCCAAAGGACGGGAACTGATGGC TTTGTGCCCTGGACTTTCGAATCGCCACAAACAGGCCTAAGTGAGTATCA TATAATAGTTCTGTGTCAAGATACAGCGCGGTCAGCAGTTCATGTTGACC GGTAATACGGGTGGCCGCTCATGATGAGTGTTTGGTTGCACACTTCCGCT GGAAAATATTTTCAGCGCACCTCTCATGCACAGGACCCTCCATGACCTTG CTTGTCGCTCAGGGATAATTTCTTGGTGAACGGCGAAGCACGGAGCATTT CCTGGGAGTTTCTGGAGGATATTTTGACAGATATCCATGCAGGCACGACT GCAGAGGCGAAAGGTTACCCTGTGATGAGCCTTGAGCAAATGGACCTCAA CAATCGATATCCCACTGCTGGGTCGATGTTCAATTCCGTGAGCGGCCGAC CAGACAGGAACCGAGTAAATGCATGCTGGATAGTGTTAAGGTAGATCGTG TCACAGAGCCTGCCGCGTGCTGCTGCTATAGCGCTTGCGTGCTCGTCTTG AGCTCCGTTTCTGTCTTTGGCACTCTGGCTCTCTTGAAACACGGAAGCTT GGAGTGCGCGACCTACTCTGCACTCTGCCTTCCTTCAAACGAACTTCCCC GGAGGCCAGATCTTTGCGTGCCGTCATGATGTTTTATGTAGTGCACCGTC CATCAGCTCGCACAGTACCTGCGGTAGAACCCATGTCCCGTACAGTGGCA TTTGATTCAGGCATTTTGGTGGATCATCCTCCCTGTATTTCACTGCGTAG ACGTACAGTACGTTGGCGTTTTTTTGTTACCATGTGCGCGCCTATTTTTT TGCCATGTTTCAGTCTGCTCTTTTAATTTTCTTGACAGGTGGTGCAGCAG GGCGAGCTCGGGGAGGACGTGGAAATCCAAATGCACGAGTTATCGAAAGA AGATGCAGAGAGGTCAGGGGGGTCACATGGGCCACCTGTCCGTGGCGTGA AGAAGTGGCGGTCGAGCACGTGGGTGCGAGGAAAGGAATATTCTTGGCTC CATACGGCAGCCAAGGAAAGAGCTGCGTTCCACGAGGCTGCGGCAAAATT GTTGGAAGAGCTGGTGCCAGGTGAGAGTAGCAGTTCGAGACGGAACGTAC TTCCGCTGTCGATTGTGGCCTTATTCGTGAATGAGACAAGGGTTTGTGGC TTGTGCGCGGCAGAAACACTTTCTCCAGCGATGAGCCCGATGGCGTGCGG TATCTTGTGTGTGTGTTTGCTGGTAGTTTTGCCGTGCATAAGTCCTCCCC CATGTGGTGAGCACTACCTGTAATTGAAGAGCATGCTAAATAATGGGGCT TCACCGGCATTCTATCTTAGCCTGCCGACTTGGCTCTGATGTGTCAACGC TGCTTCTCCCTCGGCAGATGTGCACGAGAAGTTCTTGGAGCAGGAAAAAG ATCGCCTGCTAGAACAAGCCCAGCTTGACAGAGATTTGGAGGACATTGAC TCGGTAGGTTTGGAGTTGGTGCGTCGTACAAGGTGTAACTGCTGTGACGC GGCTACCAAAAACATCTTCACCGCTGGTGATGAGGTGACAGACATCACTT GGCCGCAATATTGTTGCTGCTCGAAGTATTCTTCGTTTTGGTTCCTCTCT GGTGTACGTATTTTGGTATTTTCACGATGTGTACGTGCAATGTTTGTCTT GCTGCTACAAGGTGCAACAAGCGCGCTTGGATCTCGGTGGGCCCACGTCT GGTGTAGGCTGTAAGCGGCTCAGGTGCAAGAGAGAGGGTGGGATTGAGCG AGAAGGACCATCAAAGAGGGAAGGACTTGTCAATCCAAACTCACCATCAG CCGGCACGAGCACCTTCGTTGACCTCAAATTTAATCATATTGAAAAAACA TTTCGTCGCCCTAATGCGGCCGAGAGCGTCCGACGCGACCCAAGTCAACG TTTGAAACCATGTCACCGAAACAGTTGCCTCTTGACTTTTGTGGCCTACA ATCTCTGTGTAAGAAACGGTTGTCGTTCTTGTCTTCATTTTTGTTTCCGA CGCTTGGCCTTTTTGTTGCCTGTAGGACCTCGACGATGACTTGGAAGGCG GGAACGTCCGCAGCAGTCGGTGGGCCGGCAAGAAGCCGCTTTTCGACGTT CAGGAGTATCTGACGGGTGTGCTGTGGAACTTGCAAATGTACATAGACGG GTATGTGCCAAACTATTATTGGCGATACAGCCCGCGCTACAGCCCCTCGG TCTCCGACATTTTGTCTTTTTTGCAAAACGACTCGGACAGCCTGGCCAAG GTCTCTCCGCCGGTCACCCAGGCGCCACCCTTGCCTGCAGCTATTGCTTG TCTGTGCATGATGCCGATGACAGACGCCGGGAAGGCTTTTGTTCCGGAGC GTCTTCAACCACTGCTTACACCAGGTTCTCCTCTTGTTGAGGCGTTAAAA TGGAAGGGGGACAGCTCGGGGCTCGATATCCCCAAAATTTTGCGGGTCGT GTCCGAAGAAGCCCCCGAGGAGCTGCGAGGTTTCCACGATGGCTCTCGTA GCAGGTAAACTTACGTGTATCATACGTCGTGAGAGGGATAGGGCGTGCTT GAAACTTCGTGCGAGGATACTCTTGCCGGGAAGCTGCGCGGCATGTTTGT GCGCTACTAGTATGAATATTCTACGCATGGATGCCCAGAATGGGTGAAAT GCTCGGGAGTAGCAGGGTGGGCATCCCGTGCATCGTGTAGGGGCATGGAA GGCGTATGGAGGATGAATTTCAGAACAACGAAACAACTTTTCATGTTGCG TATTTTGGGTGTTGCGCGCAATTGTTGACGTCGTGACTTTCTACGCATCA CTTTGACCCCGTCAAAATCTGTGCTCGTTTTCGTTTTTCTGCCGGCGTGC ACGTCTCGGATCCCAGCTGTGGGTGGAAGGTGGTGTTCCTGGACTTGTCC GCTCCACAAGGCGAGCCCCCTTCGCCACCGCCACCTTCGAAAGACTTTCC GCCGCTGGAGAATAGCCGGCGCTGCAGCGCCTACAAATTTAAGCGGATCC AGGCCACATCCTTACCAGCCACATCTACGCCAAGAAACTTGGCTTGGAGC AGTCCTAGCAACCCAACGTGGCAGCAGGAGCCAAGCATTCTCGGCCAACC TTACAAAACGCCGTTCGATAAAGACGCCGAAGAGCGGGGGGGTGGTCGGG GCAGCAGAGGCCGCGGAGGGAGGGGGGTCCGTGGGGGCAGGGGTGGCGGT AGGGCGGCACAGCCGAAGTCAGTCGCATGGCGCAAAAAAACTAGCACGCC AAGAATACGACAGGGCGGCGGCGCGGGCAGGGGTTCAGGTGGTCAACTTG GAGTTAGCGGTAGGACGGAGGATACTGGTGTCCCAAATTACTCACGCGGA GCACCAGCTGCCGAGGAAAGGAAGGCGAGACCCAGTCCGTTCCCCTCCTC ACCACGGTCCGACACGAGGGCCTCGATGTGTTGCGGTGGCCCAGCACTGG GACGGTCTCAGTGCCGGATACTACTGTAGTAGCCTTGTTGCACGTTTTGG CTCTGGCTGGACTTATCGACGCACGGCACTTTGCTCATCCAGCGCCAAGG TTTTGAACAAGCGGGCCTGATATGGTTCCAATGTTGTTTCCGAGTCATCT CCGGTCTTCTAAATTGTATGATTTTCAAGTGGAATTTTTTCATCGATCAA CCGTGACGTCGGTAAGTACCCCGAGCTCCTGACGACACTGCGACTTTCCA GCGCGGGAGAAACCGTCTGCAGCACGGGCACGCGTGTACAATCCGCTGTT GATGCAGGCGGCAATTACAAGACGTTTGCTGTCCTCCTTCCTGTAGAATC TGCTCAAGGCTGTGGACCATGTTACAAAGATATCTGGGTCTGGGTCGGCT GCTTTGCAGTCGAACGGTGTCCTTGCTCTCTCTGCGCCACTTCATCATCC TATTACTTGGGGTGTTTTTTATCTTTTGGCGTGCCTTCCGCGGTAAGGGG TGGTACAAACAATTCCCGGATGTGGCCTGAAAAGTGAATCATCATTTGAT ACCGCAAAATCTTGTCGTGGAGTGTACGTGACTGGTGGTGTCGTCCAGAT GGAGGCGAACAAGTGAACGGAGATGAAGAACACTTAAGACTATTGGGAAT ATGACTCTGTGAAACCTATGTTTTTTCAATTTTTGTCATCCCAACAACGG AAACGACAATGTTGTCGCCGGGGGGAGGGTGCTTTTCTGTGGGGATTATT TCTTGTGTTACCCGGAGAAGAAAAGGTACAGGTGGCGGGAGCTATCGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig133:102981..111428+

>mRNA_P-littoralis_Contig133.30.2 ID=mRNA_P-littoralis_Contig133.30.2|Name=mRNA_P-littoralis_Contig133.30.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2457bp|location=Sequence derived from alignment at P-littoralis_Contig133:102981..111428+ (Pylaiella littoralis U1_48)
ATGCTTGGGAAGACCCTCGTCTTCGTATTCTTGGTACTACTGCTGTGTCA
GGGCGTTGTGGAAGCTGGTATCGCTGGGTTCCACAAGTGGTTCGTGGGAG
CCTTCCCGGGAGCTGTCACGAACGCCTGGCACCCCAGACAGCAGGAAAGT
TTCGATCATGTCTGTATCGACATGAACCAGATACTCCACGTAGCGATGCG
CAAGGCTGCAGACGAGGACCACGCCATCCGTCGCATTTTCAGGGACGTTA
ACCTGACCCTCAAGCGTTGCCCGCCTCGCAAGAGTGTTGTCTTCGCGTTC
GACGGGAGCGCGCCGCTTGCAAAGCTTCTTGTCCAGCGTGGTCGGCGGGA
GAATCCCAAGCGAAACTCAAGATATGGCGTGAGCGCTCTCCACCTCTCTC
CCGGCACAAAGTTTATGGAAGACGTGGCGAGTGCAATGGAGTACTATGCA
TTTCAGGAGTGCACGCGGCCTTGCTACGAAGGCGTCAGGTTCTATATTTC
TGGGGCAAACGTGCCGGGTGAAGGAGAGCTGAAGTGCATAGATTGGCTTA
AGCACATGTCAAATCCAGGCTCAGAGGAGAGTGTTGTGATTGTCGGCGGA
GATGCCGATCTCATACTTCAGGGGCTTGCCCTCAGTGAGGTGAAGAACAC
GTTCATCTGTTCCCAGACAAACACTGGCTCTTTCCGCCTTTCGTCCATCT
GGGAAGTGGTTCGCGCGTTGGAGACGTCGTTCCCGGGCCAATCGGACTTT
GTCAGGAGTGATCTGGCGGTGTTAATCATGCTCAACGGGAATGACTACCT
TCCGAAGGTCAGGGGGGTTTCCTTCGACCGCTGTTTCCGGTCTTACACTG
CTCTCAAGAAGGGAAAGCACCGGGATAATTTCTTGGTGAACGGCGAAGCA
CGGAGCATTTCCTGGGAGTTTCTGGAGGATATTTTGACAGATATCCATGC
AGGCACGACTGCAGAGGCGAAAGGTTACCCTGTGATGAGCCTTGAGCAAA
TGGACCTCAACAATCGATATCCCACTGCTGGGTCGATGTTCAATTCCGTG
GTGCAGCAGGGCGAGCTCGGGGAGGACGTGGAAATCCAAATGCACGAGTT
ATCGAAAGAAGATGCAGAGAGGTCAGGGGGGTCACATGGGCCACCTGTCC
GTGGCGTGAAGAAGTGGCGGTCGAGCACGTGGGTGCGAGGAAAGGAATAT
TCTTGGCTCCATACGGCAGCCAAGGAAAGAGCTGCGTTCCACGAGGCTGC
GGCAAAATTGTTGGAAGAGCTGGTGCCAGATGTGCACGAGAAGTTCTTGG
AGCAGGAAAAAGATCGCCTGCTAGAACAAGCCCAGCTTGACAGAGATTTG
GAGGACATTGACTCGGACCTCGACGATGACTTGGAAGGCGGGAACGTCCG
CAGCAGTCGGTGGGCCGGCAAGAAGCCGCTTTTCGACGTTCAGGAGTATC
TGACGGGTGTGCTGTGGAACTTGCAAATGTACATAGACGGGTATGTGCCA
AACTATTATTGGCGATACAGCCCGCGCTACAGCCCCTCGGTCTCCGACAT
TTTGTCTTTTTTGCAAAACGACTCGGACAGCCTGGCCAAGGTCTCTCCGC
CGGTCACCCAGGCGCCACCCTTGCCTGCAGCTATTGCTTGTCTGTGCATG
ATGCCGATGACAGACGCCGGGAAGGCTTTTGTTCCGGAGCGTCTTCAACC
ACTGCTTACACCAGGTTCTCCTCTTGTTGAGGCGTTAAAATGGAAGGGGG
ACAGCTCGGGGCTCGATATCCCCAAAATTTTGCGGGTCGTGTCCGAAGAA
GCCCCCGAGGAGCTGCGAGGTTTCCACGATGGCTCTCGTAGCAGCTGTGG
GTGGAAGGTGGTGTTCCTGGACTTGTCCGCTCCACAAGGCGAGCCCCCTT
CGCCACCGCCACCTTCGAAAGACTTTCCGCCGCTGGAGAATAGCCGGCGC
TGCAGCGCCTACAAATTTAAGCGGATCCAGGCCACATCCTTACCAGCCAC
ATCTACGCCAAGAAACTTGGCTTGGAGCAGTCCTAGCAACCCAACGTGGC
AGCAGGAGCCAAGCATTCTCGGCCAACCTTACAAAACGCCGTTCGATAAA
GACGCCGAAGAGCGGGGGGGTGGTCGGGGCAGCAGAGGCCGCGGAGGGAG
GGGGGTCCGTGGGGGCAGGGGTGGCGGTAGGGCGGCACAGCCGAAGTCAG
TCGCATGGCGCAAAAAAACTAGCACGCCAAGAATACGACAGGGCGGCGGC
GCGGGCAGGGGTTCAGGTGGTCAACTTGGAGTTAGCGGTAGGACGGAGGA
TACTGGTGTCCCAAATTACTCACGCGGAGCACCAGCTGCCGAGGAAAGGA
AGGCGAGACCCAGTCCGTTCCCCTCCTCACCACGGTCCGACACGAGGGCC
TCGATGTGTTGCGGTGGCCCAGCACTGGGACGGTCTCAGTGCCGGATACT
ACTGTAG
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