mRNA_P-littoralis_Contig133.30.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A6H5KZW9_9PHAE (XRN_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZW9_9PHAE) HSP 1 Score: 987 bits (2552), Expect = 0.000e+0 Identity = 529/816 (64.83%), Postives = 622/816 (76.23%), Query Frame = 3
Query: 123 LLLCQGVV--EAGIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQECTRPCYEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFICSQTNTGSFRLSSIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALKKGKHRDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQMHELSKEDAERSGGSHGPPVRGVKKWRSSTWVRGKEYSW--LHTAAKERAAFHEAAAKLLEELVPDVHEKFLEQEKDRLLEQAQLDRDLEDIDSDLDDD--LEGGNVRSSRWAGKKPLFDVQEYLTGVLWNLQMYIDGYXXXXXXXXXXXXXXXVSDILSFLQNDS-DSLAKVSPPVTQAPPLPAAIACLCMMPMTDAGKAFVPERLQPLLTPGSPLVEALKWKGDSSGLDIPKILRVVSEEAPEELRGFHDGSRSSCGWKVVFLDLSAPQGEPPSPPPPSKDFPPLENSRRCSAYKFKRIQATSLPATSTPRNLAWSSPSNPTWQQEPSILGQPYKTPFDKDAEERGGGRGXXXXXXXXXXXXXXXGRAAQPKSVAWRKKTSTPRIRQGGGAGRGSGGQLGVSGRTEDTGVPNYSRGAP--AAEERKARPSPFPSSPRSDTR-ASMCCGGPALGRSQCRILL 2540
LLLCQ ++ EAGI GFHKWFV FP AVT+A + ESFDHVCIDMNQILHVAMRKA DEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQR RREN KRNS+Y +SALHLSPGTKFM+DVASAMEYYAFQECTRPCY+GV+FYISGANVPGEGELKCIDWLKHM P +ES VIVGGDADLILQGLALSEVKNTFICSQT+ GS+RLSSIWEVVR+LE FPGQS VR DLAVLIMLNGNDYLPKVRGVSF RCF++Y ALK+GKHRDNFL++G+ +SI WEFL+D+L D+ AEA+GY +SLEQMDLNNRYP AGS+F VQQG+LG+ VEI++H+LS E + SGG+ KKW+S TWVRGKEY++ LH K++ H AA KLLEEL+PD++++FLEQEK R+LEQAQLD++ EDIDS+LD+D E G R SR GK PLFDV+ +L GVLWNLQMYIDGY +DI+S+++ S D LA ++ PV APPLPA+IACLCM+PMTD GK+F+P+RLQPL+ PGSPL+EAL+W+G SSGLDI KIL+ P+EL FHDG+ SSC WKVV+LDLSA Q PP+PPPPSKDFPPL++SR ++YKF+RIQ TS+ ATS PRNL WSS S+ + ++ +L PYK + + GG R G AA PKS AWRKK+S PRIR+ G AG GS + G +GR ED P+ R P A + KARPSPFPSS R D+R +SMC G A RS CR+LL
Sbjct: 9 LLLCQAIICAEAGINGFHKWFVQEFPTAVTDA---SRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMDDVASAMEYYAFQECTRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKP--DESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRDNFLIDGDKKSICWEFLQDLLADMIPSIVAEAEGYLAVSLEQMDLNNRYPPAGSVFKMAVQQGKLGDGVEIEVHDLSDEVSGSSGGT--------KKWKSVTWVRGKEYTYHFLHVG-KKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLDEDSGAENGRERGSR-KGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQELSEFHDGAHSSCAWKVVYLDLSARQRTPPAPPPPSKDFPPLDSSRHSNSYKFQRIQVTSMSATSAPRNLPWSSASDSSSEEMQGVLDLPYKKALNGSGKPEGGRR---RRGSAGKGARGPRGGAAPPKSAAWRKKSSAPRIRKSGKAGEGSDARRGTNGRGEDA-APDLPRRPPPAVAADVKARPSPFPSSARPDSRRSSMCLGKLATRRSHCRLLL 805
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A836C8H5_9STRA (DRBM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8H5_9STRA) HSP 1 Score: 298 bits (763), Expect = 3.700e-82 Identity = 276/937 (29.46%), Postives = 381/937 (40.66%), Query Frame = 3
Query: 147 EAGIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQEC------------------------------------------------------------------------------------------------------------------------------TRPCYEG---------------------------VRFYISGANVPGEGELKCIDWLKHMSNP-------------------------------------GSEESVVIVGGDADLILQGLALSEVKNTFICSQTNTGSFRLSSIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALKKGKH-RDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQM--------HELSKEDAERSGGSHGPPVRGVKKWRSSTWVRGKEYSWLHTAAKERAAFHEAAAKLLEELVPDVHEKFL---EQEKDRLLEQAQLDRDLEDI---------------DSDLDDDLEGGNVRSS-----RW--AGKKPLFDVQEYLTGVLWNLQMYIDGYXXXXXXXXXXXXXXXVSDILSFLQN-----------DSDSLAKVSPPVTQAPPLPAAIACLCMMPMTDAGKAFVPERLQPLLTPGSPLVEALKWKGD----------SSGL-------DIPKILRVVSEEAPEELRGFHDGSRSSCGWKVV-FLDLSAPQG-EPPSPPPPSKDFPPLENSRRCSAYKFKRIQATSLPATSTPRNLAWSSPSNPTWQQEPS-----ILGQPYKTPF 2180
EAGI GF KWF G F +V A P Q++ FDHVC DMNQILHVA+R++A+E+ AI R F +++ LK PR+SVVFAFDGSAPLAKLL QR RRE +R RY +SAL+++PGT FM A AM YYA+ RP Y G V +Y+ A+V GEGELK +DW H++ G EESVVIVGGDADL+LQGLALS+VKN F+ + S R+ S+W+V R LE FPG+S +R+DL L++LNGNDYLPKVRGVSF RCFR Y A K + +F+++ E + +W FL L G +G + + G +++ G+ +++ E+ E +G S P GV S V G + A ++ A AA +L+EL P+++E +L ++ +LL AQ R D LD DL G W A K DV+ YLTGVLWN+ MY DG+ D+ +++ L V+ PV++ P LP+ +ACL MM + G+ VP RL+ LL SP+ ++G+ DI +L V++ PE L GF +G R W V+ P+G P + PPP PPL+ + S K + ++PATS+P +W+ SN +P+ +L +K PF
Sbjct: 20 EAGIQGFSKWFKGVFHDSVM-AVQPGQRDQFDHVCFDMNQILHVAVRRSANEEQAIARTFTEISQVLKTLEPRRSVVFAFDGSAPLAKLLTQRARREGGRRAERYQMSALNITPGTDFMRSAAEAMRYYAYTRLPGGTARLPGGTYNHTLXXXXXXXXXXXXXXXXXXXXAGVCVHDDITPXXXXXXXXXXXXXXXXXXXXPDGTQASKFGPGDKVWLDLGEPGAPQWTGPWAIQGRKGADDLVLTHHKGGARKVVSAALVRP-YRGDPPPGPRGTREGVXXXXXXXXXXXXXXVTYYMGTADVLGEGELKILDWA-HLAGRRPRSLAALRTAXXXXXXXXXXXXXXXXXXXXXXAVAHGGEESVVIVGGDADLVLQGLALSKVKNLFVYASELKRSGRIVSLWQVTRQLEAMFPGESGGIRNDLIFLLVLNGNDYLPKVRGVSFGRCFRHYCAAKAAPGGQGSFIIDSERQRFNWPFLLRFLKFATMGAAMALQGPTPAQWVNAAVQKKVIRGGR--KKLIRGGQXXXXXXXXXXXXXXXVTYDVFSEEPEHNGDS---PRFGV-----SVAVAGTTLTVPAEHASQKDARRAAATLVLQELAPELYEDYLVARQRHDAQLLAAAQQRRXXXXXXXXXXXXXXXXXLADDXXLDLDLNGDESSDEYEYEPEWDRAPGKGGHDVKAYLTGVLWNIHMYQDGFAPDNYWRYGHRYAPSCHDMADWVEQRIALEASGADEQGQPLTDVASPVSRKPALPSDVACLAMM--SAEGRDLVPRRLRALLDADSPVGNMFAPPASXXXXXXXXQPAAGVVPQRREFDIDALLAAVNDHCPEALNGFAEG-RQEVKWTVIQHASQPLPRGCTPLNLPPP---IPPLDRFLKVSPDTVKCV---TMPATSSPPGRSWAG-SNWAGAADPAAGAIPLLSVKFKKPF 933
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: M1US37_CYAM1 (XRN_N domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1US37_CYAM1) HSP 1 Score: 263 bits (672), Expect = 9.430e-72 Identity = 181/564 (32.09%), Postives = 271/564 (48.05%), Query Frame = 3
Query: 153 GIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRR--------ENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFICSQTNTGSFR-----------------LSSIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALK--KGKHRDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQMHELSKEDAERSGGSHGPPVRGVKKWRSSTWVRGKEYSWLHTAAKERAAFHEAAAKLLEELVPDVHEKFLEQEKDRLLEQAQLDRDLEDIDSDLDDDLEGGNVRSSRWAGKKPLFDVQEYLTGVLWNLQMYIDGYXXXXXXXXXXXXXXXVSDILSFL-QNDSDSLAKVSPPVTQAPPLPAAIACLCMMPMTDA 1754
GIAGF +W++ FP V E FDHV D+NQ++H+A R A + D R+FR ++ L+ C P+KSV AFDG APLAKL+ Q+ RR KR R GV L LSPGT+ M+ A+E+Y + R Y+ VRF +SG VPGEGE+K ID++ +P + SVV++G DADL++ GLA +V+N F+ T + + + S+W+ +R L+ FPG++ +R DL V++M+ GNDYLPK+RG SF+ + +Y ALK KG R +LV E RS WEFL ++ + P ++ E +++ G + Q G + SK+ ER+ +H + E +AA + V D + +LE+ + + +DDD + L+D +E+L +LW L MYIDG+ SDI+ +L +ND D L ++ PP++ APPLP A L ++P + A
Sbjct: 2 GIAGFQRWYLENFPSTVVTVTGESAPEHFDHVLFDLNQLIHLAARVARNRDQFFIRLFRWLDNILRLCVPKKSVFIAFDGPAPLAKLVTQKRRRVLESRKLHRTRKRKRRCGVDVLSLSPGTELMQLTLQAVEFYVCSRLQSKRHLYQNVRFVVSGPTVPGEGEIKIIDYIHRYVDP--QHSVVVIGSDADLVVLGLATQKVRNFFVFVITPRANMQDAPEHGTAQKRQAISAIVISVWQWIRVLDRFFPGETPSLRLDLVVMLMMQGNDYLPKLRGTSFNSIWEAYKALKLDKGPMRGKYLVCREQRSFDWEFLYALMKRLINPLV------PNLTKELIEMYREASIRGQEALRLAQAGNASVEASSSCESESKDSVERN---------------------------VHPSDLEDGTEPDAAHGEISADVTDPED---------ILEKVDIPEGIS-----VDDD--------------EKLYDTEEWLRTLLWALAMYIDGFCPDFYHTYSRAYGPSASDIVRWLKENDGDPLLQLQPPLSVAPPLPPHAALLALVPASAA 502
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A7S1TFG2_9RHOD (Hypothetical protein n=4 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFG2_9RHOD) HSP 1 Score: 244 bits (623), Expect = 1.960e-65 Identity = 204/693 (29.44%), Postives = 319/693 (46.03%), Query Frame = 3
Query: 240 DHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHL-----SPGTKFMEDVASAMEYYAFQECTR----PCYEGVRFYISGANVPGEGELKCIDWLKHM---SNPGSE------ESVVIVGGDADLILQGLALSEVKNTFICSQTNTGSFRLSSIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALKKGKHR--DNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQMHELSKEDAERSGGSHGPPVRGVKKWRSSTWVRGKEYSWLHTAAKERAAFHEAAAKLLEELVPDVHEKFLEQEKDRLLEQAQLDRDLEDIDSDLDDDLEGGNVRSSRWAGKKPLFDVQEYLTGVLWNLQMYIDGYXXXXXXXXXXXXXXXVSDILSFL-------QNDS----------------DSLAKVSPPVTQAPPLPAAIACLCMMPMTDAGKAFVPERLQPLLTPGSPLVEALKWKGDSSGL-DIPKILRVVSEEAPEELRGFHDGSRSSCGWKVVFLDLSAPQGEPPSPPPPSKDFPPLENSRRCSAYKFKRIQATSLPATSTPRNLAWSSPSNPTWQQEPSILGQPYKTPFDK 2186
DHVC D+NQ++H+A+RK+ +E+ + R+FR+++ LK+C P++SV FAFDG P+AKLL QR RR NP + R ++ H+ +PGT+ M + A++Y+A C+R Y+ V ISG +VPGEGE+K DWL G++ ESV+++GGDAD++LQGLA + ++ F+ +Q+ + SI +V+ALE +FPG+SD VR D VL ++NGNDYLPKVRGV FD + Y A+KKG+ + +L++ R+ +W FL +L I + P + L + L P+ + E DV +E+ L+T +A AA +PDV + E+D A + D + D E ++ LFD++ +L G+LWN+QMY+DG+ + I++++ Q +S D L + P++ PL A + M+P + +P +Q L G+ + + DS L ++ K+L V + P L + R+ G + S P+ PPPP F S R ++ + + T T+ P L W+S S Q S QP K F K
Sbjct: 23 DHVCFDLNQVIHMALRKSPNEEKLVIRLFRNIDAALKQCIPKRSVYFAFDGPGPMAKLLTQRVRRSNPANSQRKVLANRHIDPNAITPGTELMYMLQDALDYFA---CSRLEGDMKYDKVDMRISGPDVPGEGEVKIFDWLNSFVARREAGTQVSSIVTESVIVIGGDADIVLQGLATTSFRDLFVYAQSRRDEGTVISISLLVKALEDNFPGESDRVRLDFIVLCLMNGNDYLPKVRGVGFDSLWNGYIAIKKGREQFQGQYLLDSTRRTFNWPFLVALLETIRSVVIE-----PHVLLAEKSLQVEEPS---------RMNEEEHDVPPDPNEII----------------------------------LYTGDMTASASTSAA-------IPDVDDD----EEDH----ADXXXXXXSVGDDGEYDYESAYDETNTGESPNRLFDIELFLRGILWNVQMYVDGFCPDYTYVYPELYAPSPTAIMNWVKAHDGTVQTNSIDTTPHFSARLDDILGDPLFSIQGPLSTVQPLEPHKAAIAMLP--SSASHLLPGPIQEL---GASCTALDRARRDSMYLRELSKVLDAV-DSIPRSLYTRAELRRTRFGNVHLIRKTSRPRAASQLPPPPVARF----RSLRVPSHLNRMLVTT----TTAPPCLRWTSAS-----QVISRGSQPGKRAFSK 630
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: L1JQ07_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQ07_GUITC) HSP 1 Score: 230 bits (587), Expect = 3.480e-65 Identity = 119/243 (48.97%), Postives = 162/243 (66.67%), Query Frame = 3
Query: 258 MNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQECTRPC-YEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFICSQTNTGSFRLS-------------SIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALK 944
MN +LH A RKA D +HAI R++++++ TL+ P KSVV AFDG PLAKLL QR RR + S+Y +S LH++PGTKFM+ + A EYYA ++ V FYISGA+V GEGE+K I+W+ ++ ++E ++IVGGDADL+LQGLA+ VK+ F+ + + S S+WEVVR+LE FPGQS VR+DL VL+++NGNDYLPKVRG SF+ FR+Y +K
Sbjct: 1 MNGLLHTACRKAKDFEHAILRVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRNKSSKASKYKLSGLHITPGTKFMQTMREACEYYAALRLVASAKFKNVAFYISGADVAGEGEIKIIEWIHNLLQNQNDEKIIIVGGDADLVLQGLAVLRVKDLFVYAGKDMSQHPSSRKAKGKSSPSIVLSMWEVVRSLERLFPGQSQAVRADLIVLMIMNGNDYLPKVRGGSFESFFRAYKKVK 243
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A7J7IHE6_9RHOD (XRN_N domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IHE6_9RHOD) HSP 1 Score: 242 bits (617), Expect = 2.530e-64 Identity = 168/564 (29.79%), Postives = 268/564 (47.52%), Query Frame = 3
Query: 153 GIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRN--------SRYGVSALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFICSQTNTGSFRLSS-----------------IWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALK--KGKHRDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQMHELSKEDAERSGGSHGPPVRGVKKWRSSTWVRGKEYSWLHTAAKERAAFHEAAAKLLEELVPDVHEKFLEQEKDRLLEQAQLDRDLEDIDSDLDDDLEGGNVRSSRWAGKKPLFDVQEYLTGVLWNLQMYIDGYXXXXXXXXXXXXXXXVSDILSFLQN-DSDSLAKVSPPVTQAPPLPAAIACLCMMPMTDA 1754
GIAGF +WF+ FP T ESFDHV D+NQ++H+A R A + D R++R ++ L+ C P++SV AFDG APLAKL+ Q+ RR R R GV L LSPGT+ M+ A+E+Y + R Y +RF +SG VPGEGE+K ID++ P SV+++G DADL+L GLA ++++ F+ T S +++S +W+ +R L+ FPG++ VR DLA+L+M+ GNDY+PK+RG SF + +Y ALK +G +L+ GE R+I+ EFL +++ + E P ++ + +++ G +M L++ ++ R+G + P + + E + KE K+ +++ D LE +++ + + +FD + +L +LW L MY+DG+ +DI+ +LQ D D + + PP++ APPLP A L ++P T A
Sbjct: 2 GIAGFQRWFLETFPSTATTITDETLPESFDHVLFDLNQLIHLAARVAKNRDQFFIRLYRWLDKVLRLCVPKESVFIAFDGPAPLAKLVTQKRRRVLEARKLTRKLEPKKRCGVDVLSLSPGTELMQMTLQAIEFYVCSRLQSKRNLYRNLRFVVSGPTVPGEGEIKIIDYIHRCVEP--HHSVIVIGSDADLVLLGLATQKIRDFFVFVITPRQSAQVASRGPAETHRNSVNATTISVWQWIRVLDRLFPGETAPVRLDLALLLMMQGNDYVPKLRGSSFKSIWAAYKALKMRQGPMSGRYLLCGEQRTINLEFLYALMSSL------ENPLVPQLTKQLVEMYREASIRGQ-----------------EMARLAELESTRTGATETPDNDSISDVEQILYNGDLEKP---SPCKETT-------------------------KEPVIDMTDPDDMLEMVET----------PEGVSYDNDETMFDTENWLRMLLWALAMYVDGFCPDFYFTYPKPYGPSATDIVRWLQEIDGDPIPTLQPPMSVAPPLPPHAALLALIPSTAA 502
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A2V3J5K0_9FLOR (5'-3' exoribonuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K0_9FLOR) HSP 1 Score: 241 bits (614), Expect = 6.980e-64 Identity = 197/629 (31.32%), Postives = 285/629 (45.31%), Query Frame = 3
Query: 153 GIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRY--------GVS-----------ALHLSPGTKFMEDVASAMEYYAFQECTRPC-YEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFICSQTNTGS-----FRLSSIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALK-------KGKHRDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQMHELSKEDAER---SGGSHGPPVRGVKKWRSSTWVRGKEYSWLHTAAKERAAFHEAAAKLLEELVPDVHEKFLEQEKDRLLEQAQLDRDLEDIDSDLDDDLEGGNVRSSRWAGKKPLFDVQEYLTGVLWNLQMYIDGYXXXXXXXXXXXXXXXVSDILSFLQN-DSDSLAKVSPPVTQAPPLPAAIACLCMMPMTDAGKAFVPERLQPLLTPGSPLVEALKWKGDSSGLDIPKILRVV-----SEEAPEEL-RGFH 1913
GI GF KW +G FP V R E +DHV D+NQILH A+RKA + IFR+++ LK C PRKSV FAFDG APLAKL QR RR + S Y GVS L ++PG + + V ++EY+A+ Y V ISGA+VPGEGELK ID+ + P S +SVV+VGGDAD++LQGLA V+N F+ + GS + S+WE+ R E FP +S VR D +L +LNGNDY+PKVRG+S R + Y LK G R LV+ E R+++W ++ + G PV S+ + + AG V E + E ER +G G P+ + V ++ S+ E ++ +++ E ++E++ + L GN SS++ +D ++ +LWN+QMY+DGY +++IL++++N D D +P P LP A M + K +P+ LQ + V K G +D+P ++ SE + EEL R FH
Sbjct: 2 GIIGFQKWLLGNFPDIVRVQQGARFGEYYDHVAFDINQILHQAVRKATNRQTLAAAIFRELDQILKNCIPRKSVFFAFDGPAPLAKLATQRRRRRQRRGASEYVSDYIDENGVSRKAKTVQPAIDGLEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVEIRISGADVPGEGELKLIDFCRTAQIP-STDSVVVVGGDADIVLQGLATVPVRNFFVYLRNFAGSRGRRQSYVISVWELTRIFERLFPNESSSVRLDFVLLAILNGNDYIPKVRGISLSRTWHRYLNLKLDSSGGRPGPFRGRSLVDAEKRTLNWPMFYALMDRV---------GVPVSSIAEAEQEKESTPAG------VPPRRKRRGKEGYVSYSDSEVGERIVYTGNEDGVPMDCL----DDDSVPTRDESFSENGVSETDSYEDSS-----EYNXXXXXXXFDEEQEHIQTLVTL----------------SGN--SSKF------YDTNRWVRALLWNIQMYVDGYCGDYSFRYGKPYGPPITEILNYIRNHDGDPFLHQAPVSNWRPLLPHQAA---MAVLPKQAKHLLPKPLQRIYDDP---VAVRKIFGSKDDVDVPSLIAETDRIPKSEFSSEELLRTFH 575
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: I2CR78_NANGC (5'-3' exoribonuclease 1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR78_NANGC) HSP 1 Score: 222 bits (565), Expect = 2.890e-59 Identity = 137/361 (37.95%), Postives = 200/361 (55.40%), Query Frame = 3
Query: 144 VEAGIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYEGVRFYISGANVPGEGELKCIDWLK-----------------------HMSNPGSEESVVIVGGDADLILQGLALSEVK--NTFICSQTNTGSFRLSSIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALK-KGKHRDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQ 1142
VE GI GF KWF G + V+ Q FDHV ID+NQ+ H+A RKA DEDHAIRR+ +++ TL+ +KSVV AFDG APLAK++ QR RR K +++ +++LHLSPGT FM A A+ + E +R+Y+S + PGEGE+K +DW+ + ES+V+VGGDADL+LQGLAL + N FI +G F S+ + V LET FPGQS VR+D+ +L+++ GNDYL KVRG++F +Y +K K + +D F++ E ++ +W FL+ D+ A + ++ + + R PT + N ++Q
Sbjct: 62 VEGGIYGFWKWFRGHYKEVVSKV-SSEQYAEFDHVLIDVNQLTHMAARKARDEDHAIRRLLKELGRTLRVLRAQKSVVIAFDGPAPLAKIITQRKRRAAEK-DAKTPLNSLHLSPGTSFMRRAAEAVIDFCHTRLESDLTPRRRIRYYVSCSESPGEGEVKLMDWINTYLLTHEDGRXXXXXXXXXXXXXKKAGRKDSESIVVVGGDADLVLQGLALPGLPDFNVFIPDVKRSGYF--VSLRQFVARLETDFPGQSHQVRTDMVLLLVMAGNDYLKKVRGLTFRSKLLAYNNVKRKPEFKDQFMLLAENKTFNWPFLQAFYDDLAARSF----------VDDLSVLLRGPTPAGVLNELMQ 408
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A7S4KKW8_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KKW8_GUITH) HSP 1 Score: 185 bits (469), Expect = 2.710e-47 Identity = 114/356 (32.02%), Postives = 176/356 (49.44%), Query Frame = 3
Query: 153 GIAGFHKWFVGAFPGAVTNAWHPRQQESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQECT-RPCYEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFICSQTN-TGSFRLS-----SIWEVVRALETSFPGQSDFVRSDLAVLIMLNGNDYLPKVRGVSFDRCFRSYTALK-KGKHRDNFLVNGEARSISWEFLEDILTDIHAGTTAEAKGYPVMSLEQMDLNNRYPTAGSMFNSVVQQGELGEDVEIQMHELSKE 1196
G A +W +FP V FDHV DMN +LH R + +R+FR V+ L+ P KSVV FDG P+AK+ Q RE + + + ++ ++PGT+FM +V + Q R Y + FY+S ++V GEGELK ++W+ S++ ++ +GGD+DL +Q LAL ++ ++ + G R+ S+ E+ + LET FP SD +R DL +LI+ NGNDYLP ++ + F YT +K + K R FL++G ++ +EFL + L + A P++ L Q VQ+G L VE E S+E
Sbjct: 18 GKAASKRWLEASFPKCVIPISPRSPSFKFDHVLFDMNDMLHTCARNCKNSSAVCKRVFRQVDSYLRIFTPGKSVVLCFDGPGPIAKIPKQVESREKRTKVASSTLDSIDITPGTRFMSEVRELCFAHVVQSLEQRGGYRDISFYLSCSDVAGEGELKLVEWIHTFVESASKDRILFIGGDSDLTIQSLALRGHSQVYLLNRKDGVGLQRIKPMHFISLSELKKELETIFPDHSDIIRFDLLLLIIFNGNDYLPPLKHFNLQVSFEVYTLMKSQEKFRSRFLLDGREKTFDYEFLAEFLKQVDARLKTWKISNPIVELHQY----------------VQEGSLEYSVEDLQFEFSQE 357
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Match: A0A7S0E673_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E673_9CRYP) HSP 1 Score: 176 bits (446), Expect = 6.620e-47 Identity = 84/172 (48.84%), Postives = 120/172 (69.77%), Query Frame = 3
Query: 231 ESFDHVCIDMNQILHVAMRKAADEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRGRRENPKRNSRYGVSALHLSPGTKFMEDVASAMEYYAFQECTRPC-YEGVRFYISGANVPGEGELKCIDWLKHMSNPGSEESVVIVGGDADLILQGLALSEVKNTFI 743
E F+HV DMN +LH A R+A D +HAI +++++++ TL+ P KSVV AFDG PLAKLL QR RR ++S+Y +S LH++PGTKFM + A EYYA + V FYISG++V GEGE+K IDW+ ++ + +++ ++IVGGDADL+LQGLA+ VK+ F+
Sbjct: 2 EEFEHVLFDMNGLLHTACRRAKDFEHAILKVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRSKSSKSSKYKLSGLHITPGTKFMHAMKQACEYYAALRLVASAKFRNVAFYISGSDVAGEGEIKIIDWIHNLLHSQNDDRLIIVGGDADLVLQGLAVLRVKDLFV 173 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig133.30.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig133.30.2 >prot_P-littoralis_Contig133.30.2 ID=prot_P-littoralis_Contig133.30.2|Name=mRNA_P-littoralis_Contig133.30.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=819bp MLGKTLVFVFLVLLLCQGVVEAGIAGFHKWFVGAFPGAVTNAWHPRQQESback to top mRNA from alignment at P-littoralis_Contig133:102981..111428+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig133.30.2 ID=mRNA_P-littoralis_Contig133.30.2|Name=mRNA_P-littoralis_Contig133.30.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8448bp|location=Sequence derived from alignment at P-littoralis_Contig133:102981..111428+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig133:102981..111428+ >mRNA_P-littoralis_Contig133.30.2 ID=mRNA_P-littoralis_Contig133.30.2|Name=mRNA_P-littoralis_Contig133.30.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2457bp|location=Sequence derived from alignment at P-littoralis_Contig133:102981..111428+ (Pylaiella littoralis U1_48)back to top |