prot_P-littoralis_Contig133.22.14 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig133.22.14
Unique Nameprot_P-littoralis_Contig133.22.14
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1065
Homology
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BLAST of mRNA_P-littoralis_Contig133.22.14 vs. uniprot
Match: D7FIA5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIA5_ECTSI)

HSP 1 Score: 637 bits (1643), Expect = 6.760e-213
Identity = 455/614 (74.10%), Postives = 491/614 (79.97%), Query Frame = 0 
Query:  287 MRAVSKQRNGWRQALAIFEGFLEVGL--ARARSSSEEEQQGVGVGGKRSPQGRSNNDDVPGPAVGQGQLLHLLSEIMPGWEAVCQAALEACTRGGQWERALEILSILRAGGGGAELSKAAYDEAIEVCGNGRAWDMVLLLVAEMSSDEIPISAXXXXXXXXXXXXXXXXXXXLSLLRCMSVTTDIANGVPLNAAHYLDALHSCANVVDKPGGPQAKAAAKAALGLLQDARETGWLVGRQGQKSYMCAMKACAVAQDAWSALALLDSAQDDRVRRSHVHLLITHPRPVVQACSGAGEWRAALSILDDMQAEGLRPAGGAYVAAMEACARGGMMDLALELLDTVLQEHLGDERTITAGYHXXXXXXXXXXXXXXXXXXXQRMRQDPVAVVTSKEYNAAILACCRAQQSVAALTLLGDMSVETNGCRVDETSYILVMRAFGREGRWRTVIDLMGSLKEEGGLVPTVSXXXXXXXXXXXXXXXXXXXXXXXEMXXNGCRPTEFTXXXXXXXXXXXXXXXXXXXXXXXLRQQEDIVPDSYXXXXXXXXXXXXXXXXXXXXXXXXXXEMSANSGPNLVNYNIAIGCCARERDWTRMLAEMDRMRREDIEPEENTFFVPLD 898
            MR V KQ  GWRQAL ++EGFLE+ L  ARA +S  EE Q           GR+  D VP P + Q Q LH L E+ PGWE VCQAALEAC  GGQWE AL++LS+LRAGGGGAELS+AAY EAIEVCG GRAWDMVLLLVAEMSSDEIP++A                   LSLLRCMS +T+  NG+PLNAAHYLDAL SCA VVDKPGGP+A+AAAKAALGLLQD RE GWLVG+QG+    CAMK  A A+DAW ALALLD  QDD + RS     +      +QACSGAGEWRAALSIL+DMQAEGLRP G AYVAAMEACARGG+MDLALELLD VL  H  DERT+TA   XXXXXXXXXXXXXXXXXXXQRMRQD +AVVTS+EYNAAI+ACCRAQQSVAALTLLGDMSVE+  C  DETSY+LVMRAFGREGRWRTVIDLMGSLKEE GLVPTVS XXXXXXXXXXXXXXXXXXXXXX  X    RPTEFTXXXXXXXXXXXXXXXXXXXXXXX ++QED+VPDS XXXXXXXXXXXXXXXXXXXXXXXXXX MSA SGPNLV YNIAIG CAR RDW RML EMDRMRREDIEPEE+TF  PLD
Sbjct:    1 MRVVCKQGTGWRQALPLYEGFLELALEQARATTSPLEETQA----------GRA--DVVPVPLLRQRQQLHRLKEVAPGWEDVCQAALEACNIGGQWEAALKVLSVLRAGGGGAELSEAAYTEAIEVCGKGRAWDMVLLLVAEMSSDEIPMTAATFETALKGCAATGAWSWALSLLRCMSTSTNGPNGIPLNAAHYLDALRSCAGVVDKPGGPKAQAAAKAALGLLQDVRENGWLVGQQGEDLVYCAMKTQAAARDAWGALALLD--QDDGLPRS-----VMLRTGAMQACSGAGEWRAALSILEDMQAEGLRPNGAAYVAAMEACARGGVMDLALELLDRVLMFHPRDERTVTAAXXXXXXXXXXXXXXXXXXXXXQRMRQDSLAVVTSREYNAAIMACCRAQQSVAALTLLGDMSVESEHCSADETSYVLVMRAFGREGRWRTVIDLMGSLKEEAGLVPTVSSXXXXXXXXXXXXXXXXXXXXXXXXXQERVRPTEFTXXXXXXXXXXXXXXXXXXXXXXXXKEQEDLVPDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSATSGPNLVLYNIAIGSCARARDWPRMLEEMDRMRREDIEPEESTFAAPLD 595
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig133.22.14 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIA5_ECTSI6.760e-21374.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 982..1038
e-value: 1.1E-4
score: 22.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 858..888
e-value: 0.0027
score: 15.8
coord: 749..782
e-value: 5.9E-9
score: 33.6
coord: 819..847
e-value: 3.9E-4
score: 18.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 745..792
e-value: 3.1E-10
score: 40.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 645..667
e-value: 0.13
score: 12.6
coord: 713..741
e-value: 0.65
score: 10.4
coord: 572..596
e-value: 1.1
score: 9.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 889..923
score: 8.878711
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 924..958
score: 9.218511
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 746..780
score: 12.901507
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 854..888
score: 9.45966
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 817..851
score: 9.788499
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 994..1028
score: 9.306201
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 959..993
score: 8.70333
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 906..1056
e-value: 2.7E-28
score: 101.3
coord: 637..736
e-value: 1.1E-14
score: 56.6
coord: 468..636
e-value: 3.1E-14
score: 55.1
coord: 356..467
e-value: 8.3E-9
score: 37.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 808..905
e-value: 2.6E-17
score: 65.2
coord: 136..340
e-value: 2.1E-10
score: 42.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 737..807
e-value: 1.9E-15
score: 58.9
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 821..961
e-value: 1.2E-8
score: 34.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..345
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..72
NoneNo IPR availablePANTHERPTHR47938RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATEDcoord: 530..972
coord: 144..480
coord: 366..629
coord: 852..1039

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig133contigP-littoralis_Contig133:82179..94191 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig133.22.14mRNA_P-littoralis_Contig133.22.14Pylaiella littoralis U1_48mRNAP-littoralis_Contig133 81034..94233 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig133.22.14 ID=prot_P-littoralis_Contig133.22.14|Name=mRNA_P-littoralis_Contig133.22.14|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1065bp
MTPRVQASCLVTLIFIVDRPPPALGFTRGPVGKVRPRPRFSRDHVPPTAA
VYPSREPERVQTSRTSPRAMPSPPSRRLSRPDIDEASVRLALHDLEVAQA
SRPRVAGAGIPVVSNDDVSSSPNATSGAGDDVDVLARVQRHLASGSIIGA
ISVLDSAASDRVSAQKEAGPCAIGDGFRAILQSCANRGLWREARQVLVTH
MPAAQVWTTEADWLQVLAACAGAGGSEQAVFQLHDMRMRGIELSKSAYGA
AVLVCARSGDTGRSLFLFKEAAKRGVPLLPGDTADTMRAVSKQRNGWRQA
LAIFEGFLEVGLARARSSSEEEQQGVGVGGKRSPQGRSNNDDVPGPAVGQ
GQLLHLLSEIMPGWEAVCQAALEACTRGGQWERALEILSILRAGGGGAEL
SKAAYDEAIEVCGNGRAWDMVLLLVAEMSSDEIPISAAAFETALKGCAAT
GAWSWALSLLRCMSVTTDIANGVPLNAAHYLDALHSCANVVDKPGGPQAK
AAAKAALGLLQDARETGWLVGRQGQKSYMCAMKACAVAQDAWSALALLDS
AQDDRVRRSHVHLLITHPRPVVQACSGAGEWRAALSILDDMQAEGLRPAG
GAYVAAMEACARGGMMDLALELLDTVLQEHLGDERTITAGYHGAIQACAN
GGQWEDATSLLQRMRQDPVAVVTSKEYNAAILACCRAQQSVAALTLLGDM
SVETNGCRVDETSYILVMRAFGREGRWRTVIDLMGSLKEEGGLVPTVSSY
NVVVEALAKTGEWTKALEILAEMKENGCRPTEFTYSRCMAACEKSDEWEQ
TLALLADLRQQEDIVPDSYIFSTAMKACSKSGRLDGVLEILQEMREMSAN
SGPNLVNYNIAIGCCARERDWTRMLAEMDRMRREDIEPEENTFFVPLDVC
GRTGNLPMALDLLGRMREYGVEPGVVTYGSAVAAACRAGKAASAALLLDE
MTAAGHLPNERTYGVAALACREGTNADAAVDLLRRMKKQGLAPDALVLSC
AVQACSNAGNMGLGLELITEMKRAGFVPSIDFYNSVIAGINAWYGTALRC
TEHADVDGPGLGKY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
IPR033443PPR_long