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Homology
BLAST of mRNA_P-littoralis_Contig133.22.14 vs. uniprot
Match: D7FIA5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIA5_ECTSI) HSP 1 Score: 637 bits (1643), Expect = 2.960e-208 Identity = 455/614 (74.10%), Postives = 491/614 (79.97%), Query Frame = 1
Query: 901 MRAVSKQRNGWRQALAIFEGFLEVGL--ARARSSSEEEQQGVGVGGKRSPQGRSNNDDVPGPAVGQGQLLHLLSEIMPGWEAVCQAALEACTRGGQWERALEILSILRAGGGGAELSKAAYDEAIEVCGNGRAWDMVLLLVAEMSSDEIPISAXXXXXXXXXXXXXXXXXXXLSLLRCMSVTTDIANGVPLNAAHYLDALHSCANVVDKPGGPQAKAAAKAALGLLQDARETGWLVGRQGQKSYMCAMKACAVAQDAWSALALLDSAQDDRVRRSHVHLLITHPRPVVQACSGAGEWRAALSILDDMQAEGLRPAGGAYVAAMEACARGGMMDLALELLDTVLQEHLGDERTITAGYHXXXXXXXXXXXXXXXXXXXQRMRQDPVAVVTSKEYNAAILACCRAQQSVAALTLLGDMSVETNGCRVDETSYILVMRAFGREGRWRTVIDLMGSLKEEGGLVPTVSXXXXXXXXXXXXXXXXXXXXXXXEMXXNGCRPTEFTXXXXXXXXXXXXXXXXXXXXXXXLRQQEDIVPDSYXXXXXXXXXXXXXXXXXXXXXXXXXXEMSANSGPNLVNYNIAIGCCARERDWTRMLAEMDRMRREDIEPEENTFFVPLD 2736
MR V KQ GWRQAL ++EGFLE+ L ARA +S EE Q GR+ D VP P + Q Q LH L E+ PGWE VCQAALEAC GGQWE AL++LS+LRAGGGGAELS+AAY EAIEVCG GRAWDMVLLLVAEMSSDEIP++A LSLLRCMS +T+ NG+PLNAAHYLDAL SCA VVDKPGGP+A+AAAKAALGLLQD RE GWLVG+QG+ CAMK A A+DAW ALALLD QDD + RS + +QACSGAGEWRAALSIL+DMQAEGLRP G AYVAAMEACARGG+MDLALELLD VL H DERT+TA XXXXXXXXXXXXXXXXXXXQRMRQD +AVVTS+EYNAAI+ACCRAQQSVAALTLLGDMSVE+ C DETSY+LVMRAFGREGRWRTVIDLMGSLKEE GLVPTVS XXXXXXXXXXXXXXXXXXXXXX X RPTEFTXXXXXXXXXXXXXXXXXXXXXXX ++QED+VPDS XXXXXXXXXXXXXXXXXXXXXXXXXX MSA SGPNLV YNIAIG CAR RDW RML EMDRMRREDIEPEE+TF PLD
Sbjct: 1 MRVVCKQGTGWRQALPLYEGFLELALEQARATTSPLEETQA----------GRA--DVVPVPLLRQRQQLHRLKEVAPGWEDVCQAALEACNIGGQWEAALKVLSVLRAGGGGAELSEAAYTEAIEVCGKGRAWDMVLLLVAEMSSDEIPMTAATFETALKGCAATGAWSWALSLLRCMSTSTNGPNGIPLNAAHYLDALRSCAGVVDKPGGPKAQAAAKAALGLLQDVRENGWLVGQQGEDLVYCAMKTQAAARDAWGALALLD--QDDGLPRS-----VMLRTGAMQACSGAGEWRAALSILEDMQAEGLRPNGAAYVAAMEACARGGVMDLALELLDRVLMFHPRDERTVTAAXXXXXXXXXXXXXXXXXXXXXQRMRQDSLAVVTSREYNAAIMACCRAQQSVAALTLLGDMSVESEHCSADETSYVLVMRAFGREGRWRTVIDLMGSLKEEAGLVPTVSSXXXXXXXXXXXXXXXXXXXXXXXXXQERVRPTEFTXXXXXXXXXXXXXXXXXXXXXXXXKEQEDLVPDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSATSGPNLVLYNIAIGSCARARDWPRMLEEMDRMRREDIEPEESTFAAPLD 595
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7FIA5 |
| PFAMs | PPR,PPR_2 |
| Model size | 4382 |
| Max annot lvl | 2759|Eukaryota |
| Hectar predicted targeting category | signal peptide |
| Exons | 10 |
| Evalue | 1.11e-213 |
| EggNOG OGs | KOG4197@1|root,KOG4197@2759|Eukaryota |
| Ec32 ortholog description | Pentatricopeptide repeat |
| Ec32 ortholog | Ec-11_001170.1 |
| Description | endonuclease activity |
| Cds size | 3195 |
| COG category | S |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789608.9810898-UTR-P-littoralis_Contig133:81033..82178 | 1680789608.9810898-UTR-P-littoralis_Contig133:81033..82178 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig133 81034..82178 - |
| 1680789609.1137044-UTR-P-littoralis_Contig133:94191..94233 | 1680789609.1137044-UTR-P-littoralis_Contig133:94191..94233 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig133 94192..94233 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789608.9952345-CDS-P-littoralis_Contig133:82178..82767 | 1680789608.9952345-CDS-P-littoralis_Contig133:82178..82767 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig133 82179..82767 - |
| 1680789609.0059378-CDS-P-littoralis_Contig133:83472..83585 | 1680789609.0059378-CDS-P-littoralis_Contig133:83472..83585 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig133 83473..83585 - |
| 1680789609.0212169-CDS-P-littoralis_Contig133:83791..83913 | 1680789609.0212169-CDS-P-littoralis_Contig133:83791..83913 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig133 83792..83913 - |
| 1680789609.0320663-CDS-P-littoralis_Contig133:84232..84426 | 1680789609.0320663-CDS-P-littoralis_Contig133:84232..84426 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig133 84233..84426 - |
| 1680789609.0428212-CDS-P-littoralis_Contig133:85016..85288 | 1680789609.0428212-CDS-P-littoralis_Contig133:85016..85288 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig133 85017..85288 - |
| 1680789609.0536022-CDS-P-littoralis_Contig133:85489..85717 | 1680789609.0536022-CDS-P-littoralis_Contig133:85489..85717 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig133 85490..85717 - |
| 1680789609.0671434-CDS-P-littoralis_Contig133:85848..86190 | 1680789609.0671434-CDS-P-littoralis_Contig133:85848..86190 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig133 85849..86190 - |
| 1680789609.0783806-CDS-P-littoralis_Contig133:86535..86730 | 1680789609.0783806-CDS-P-littoralis_Contig133:86535..86730 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig133 86536..86730 - |
| 1680789609.0893176-CDS-P-littoralis_Contig133:87086..87510 | 1680789609.0893176-CDS-P-littoralis_Contig133:87086..87510 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig133 87087..87510 - |
| 1680789609.1002808-CDS-P-littoralis_Contig133:93475..94191 | 1680789609.1002808-CDS-P-littoralis_Contig133:93475..94191 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig133 93476..94191 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig133.22.14 >prot_P-littoralis_Contig133.22.14 ID=prot_P-littoralis_Contig133.22.14|Name=mRNA_P-littoralis_Contig133.22.14|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1065bp
MTPRVQASCLVTLIFIVDRPPPALGFTRGPVGKVRPRPRFSRDHVPPTAA
VYPSREPERVQTSRTSPRAMPSPPSRRLSRPDIDEASVRLALHDLEVAQA
SRPRVAGAGIPVVSNDDVSSSPNATSGAGDDVDVLARVQRHLASGSIIGA
ISVLDSAASDRVSAQKEAGPCAIGDGFRAILQSCANRGLWREARQVLVTH
MPAAQVWTTEADWLQVLAACAGAGGSEQAVFQLHDMRMRGIELSKSAYGA
AVLVCARSGDTGRSLFLFKEAAKRGVPLLPGDTADTMRAVSKQRNGWRQA
LAIFEGFLEVGLARARSSSEEEQQGVGVGGKRSPQGRSNNDDVPGPAVGQ
GQLLHLLSEIMPGWEAVCQAALEACTRGGQWERALEILSILRAGGGGAEL
SKAAYDEAIEVCGNGRAWDMVLLLVAEMSSDEIPISAAAFETALKGCAAT
GAWSWALSLLRCMSVTTDIANGVPLNAAHYLDALHSCANVVDKPGGPQAK
AAAKAALGLLQDARETGWLVGRQGQKSYMCAMKACAVAQDAWSALALLDS
AQDDRVRRSHVHLLITHPRPVVQACSGAGEWRAALSILDDMQAEGLRPAG
GAYVAAMEACARGGMMDLALELLDTVLQEHLGDERTITAGYHGAIQACAN
GGQWEDATSLLQRMRQDPVAVVTSKEYNAAILACCRAQQSVAALTLLGDM
SVETNGCRVDETSYILVMRAFGREGRWRTVIDLMGSLKEEGGLVPTVSSY
NVVVEALAKTGEWTKALEILAEMKENGCRPTEFTYSRCMAACEKSDEWEQ
TLALLADLRQQEDIVPDSYIFSTAMKACSKSGRLDGVLEILQEMREMSAN
SGPNLVNYNIAIGCCARERDWTRMLAEMDRMRREDIEPEENTFFVPLDVC
GRTGNLPMALDLLGRMREYGVEPGVVTYGSAVAAACRAGKAASAALLLDE
MTAAGHLPNERTYGVAALACREGTNADAAVDLLRRMKKQGLAPDALVLSC
AVQACSNAGNMGLGLELITEMKRAGFVPSIDFYNSVIAGINAWYGTALRC
TEHADVDGPGLGKY* back to topmRNA from alignment at P-littoralis_Contig133:81034..94233- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig133.22.14 ID=mRNA_P-littoralis_Contig133.22.14|Name=mRNA_P-littoralis_Contig133.22.14|organism=Pylaiella littoralis U1_48|type=mRNA|length=13200bp|location=Sequence derived from alignment at P-littoralis_Contig133:81034..94233- (Pylaiella littoralis U1_48)
GACGTGTGCTGCCCCGTTGTACAGCTGCATACAGAGACAGCCATGACTCC
ACGCGTGCAGGCGAGCTGCTTGGTAACGCTCATTTTCATCGTGGATCGCC
CTCCACCAGCACTTGGCTTCACCCGCGGTCCAGTAGGAAAGGTTCGACCT
CGTCCAAGATTCTCTCGCGATCATGTACCTCCCACTGCTGCGGTGTATCC
ATCCCGTGAGCCGGAGAGGGTACAGACGTCGCGGACATCACCCCGAGCCA
TGCCTTCACCTCCATCCCGGAGATTGTCTCGACCGGATATCGACGAGGCG
AGCGTTAGGTTGGCCTTGCATGATCTTGAAGTTGCTCAAGCAAGCAGGCC
CCGTGTCGCAGGAGCAGGCATACCGGTAGTTTCAAACGATGACGTGTCCT
CCTCGCCAAACGCAACAAGCGGCGCGGGTGATGATGTCGATGTTTTGGCT
CGTGTGCAGCGCCACCTTGCTAGCGGGAGTATCATCGGGGCCATCTCTGT
CCTTGATTCAGCTGCTTCCGACAGAGTTTCAGCGCAGAAAGAAGCCGGGC
CTTGCGCTATCGGTGACGGGTTCAGAGCCATTTTGCAGAGCTGTGCAAAC
AGAGGGCTTTGGCGAGAAGCGAGGCAGGTTTTGGTGACCCACATGCCTGC
GGCCCAGGTTTGGACAACGGAAGCAGATTGGCTGCAGGTGCTGGCCGCTT
GCGCTGGAGCGGGAGGTTCAGAGCAGGCGGTTTTCCAACTCCACGACATG
CGAATGAGGTAAAAATGTTCAATTCTGTTGGTTTTTTGTGTTCGTTGAGT
TGGAGCTCCGGAGGACAGTGTCTCCGCACTTGCGCTTTGCAGCAGCAGAA
GCTGTGGGTGTTTCATCGTCCCATCTTTTATGCACGCCACTCTACACGTT
TCGGTAAAAGTTGGGCTCACCTTCCGAGGTCACACTGTTCGGGGATTAAA
TCCCAGTCATAACAAAGCCAGATGTGGTCTGAGACTTCCGCCCTTGCCAA
AGATAGCCGTACAGGCCTCGTTTTCAAACACGCTTATGTATTTTTTGAAA
ACGTTTTTCACGTGGGGGGGGCGTCTTTTTAAGGTCTCCGGGGGCGATCA
ATCATGGCCCCCGTGGTCAATGGAGGCATATTGTACGTCAAACGATTCGT
TCTGGCGAGACGAGTGGCAGCGCGGAAGGGAAGAAAACACAAGGCAGCGG
GTTAGCCGGGGAAACCTGTTGAAAGGTGGTCCAATTCTAAACTCAAGATG
TTCTTTCGTGACCATTATTCGGCGACCTGACTGGTTCCTTACTTGCACGC
TATCGGCCCTAGGTACACTCCTTCGCGATAAGCGGGGCGTTGTGGCGACG
CTTCTTCCTTAGCTCCCAGGGCTGACTGGGTGTAGTGGTCCTCTAATCCC
TGTTCATGGCTAGATATACCCTATCCAAACACGGCAATGTTTTCAAGCTC
GCCATGGAGGATGTAAACGCTGAACGTGTGCATGGGTCGCTCTTGCTGTT
GGGTGAAGTAGAGAGGCCTTCACCAGCCTCACCAAGGAGTGTATTATTCC
ATGTCAAACGTACGAGTGAGAGGAGAGGCATCTCCTCTCTCATCGGCGGG
AAACATAATTCCCCGCTTTTCTACCTCTACCTCCCGCAGCACTATCATCC
TAGGTGAGCATGCCTTCTACTCTGTCACCAAACCCATTACGCAGATCTCC
TTTGGACTACATCTATAGACTGGGCACGAGCACAATTCGATTAGCCCCCC
TGCTCGTGGCTCAGCCCTAATAGTTCGTCCTGGAGATAGAATACCAGAAG
AAAAACTCAACAGTCAATACTCAAACAAACATTAATCCAACACATGGAAA
TCCCCCTTGCCGTATCAAACTCAAATCATTGCTGACACTACATTGAAATT
CAACGGCAATCATTTCTGCAGTATAGCTTTCAATCTAAACAAACTCCCGT
CACCACAAAGTACGAGAAACAACTCATTCCAAGCACACAGCAGTGAAGCA
TAGTTCAGTAAATCAGCTCCCCTGCTAGCATACGTCTTTTCTTGTAGTCC
AAAACTCGATGAGACCAGGTGAGAGTGAAAACTTCAAACTCCCTCGCTGT
CTTCATCGTCACCCATCATGCCGTGGGCAAACGCTTGTAAACCAAAACAA
AACTCTACAAGCAGTCGAAATACTCTGGTCAAAACTAGCGGTTGATCACT
CCATTCATTTTGAAACCATTGATTTTCAACGACAAACTCGTCTCATTTGT
TGCTACGGAATTCTCCCAACAGAATGATCTTCACCAAATTCTTCCACGAA
ATTCTCCTTGGTTAGACACAAAATCATCATCTGGAAAACAAAAATACCCT
CAAAGAAAGAAATTCATTCTCCATGGACGATAAATCCAACAAAGAATGAA
ATTCGATGTGGGCCAGTGGCGGCAAATTGGAATAATATTGGCACTGCAGA
TTACCAATCAGCTACTCTGAAAAACGGCCCCCCTGATCCAAGAATGCCCT
CATGTTTTATCGGACAACACCAGCTGGCAACAGCCCCCCTTGATAAGATA
TTGTCCTCGATACAAAGAAAGTACTACATTTAGGCACGGGCACAACGGGA
TTAATATGTCGGTCTCGCATGATGAAACGCCAACAGATATCAAAGTTTTC
GTGACACCATAAAACAAAACTCTACATTCAGAATGCCTGTAAGCAGCTGC
TCTCGTCGCGGAGAAAAACTGCAGCTTAAAACCAGGCCACATCCCTTCGA
TTTCTAAGGCAATGTCGAATCGAACCGCAATGAAACAAAGTCATATAATT
CAAACTTTTATGTTTTGCGGCGAGTACTGTGGTATCAAATCCCCCCCCAT
TGTACTCGACAACATTACAGGAGGCTTTTCAACCAACATGCATCACGCAA
AAAATCGAAGCCAACGAATGATCAAAGTCAAACACCAAAACTGAATTCCA
AGTCAAAACCAAAATCCAAAATCAGATCCAAAACCAAGATCCAAAATCAG
ATCCAAAACCAAAACCAAATCCAAAACCAAATCCAAAACCAAATCCGAAA
TCCAAAATCAAATCCAAAACCAAATCCAAAACCAAATCCGCACGTTTTGA
CCATTGCCTTGGCCACTGCTTTTCTCCCCAGGCGGGTGCATTTTCACAAC
CTCCGCCGCGGCCGCTATTCTTTCTTGCTGGCGTTGCTGCGGCTCGGGCT
TCGTCACATTTCCATATCCGCCTGGGGTGAAATAACAGTTGTCTCTCCCG
CAAAGGATTGAAACTCGGCAGTAACGTCGGGCAGGTCACGCGTTCGGAAG
GGGAAACTCGGCAAATAAGTCGTCTGTTGCGATAGAAAAACGGTGCGTTG
ACATGACGAAATACTGCATACAATATCCCTCCCATGGATTGCTCAAAGCG
AAAAACATAAAGCCAATACTTTGTAGAATCAAATACGCAATAAGCGAAAA
GCATAAAGCCAATACTGTGTAGAATCAAATACGCAATACCCCCCCGGTTC
TGTGCAGTATTGTGCGAACGGAAAAAATAATTCCCGAGGGGATGCGCAAG
ACTCTGTATGTACAGCAGTCTACCACCATCAATCCTGGTTCATCAGTTCA
CTTTGTGCGGTACTCACGATGCCGTTGTCAATAAAACAACGCTGAGATGA
GTGTGAGCAAATGTGGCGATTTCGTGAAAAGTTTCGACAAACGTAGCGTA
GAAAAACATTGTGCACGCCGGTTGTGTCTGTAAAGTGAGACGCTGGAATG
CCGATGAAATGATGCTGCAAACAAACAAATTCCGAGATAAAAAATGAAGA
ACTTTATCGTTGCGAAGTGATATCGAACCATAAAACAGGAGTACCGCATG
CTTGCAAAACGTGCAAAGATAATGAACATGCTGAATCTCTCTCAGCGAGA
TATGCTGAAAATATCTCGATGACACAGCAGTTGCGAACTCCAAAATGCCA
AAACAAAGTTCATCAGCTCAAATTACCAGCACAACGACCAGCACAACTAA
GTTGTGAAACGAAATACACGAAAAAAAATCACACGAAATAATTCTCCATG
ACCCAACAGCTACTGCCGTAGAAAACAAATTTCAACAAGCACAAAACAAA
CAATTCAAATCAAAAGAAACAAAATAACGTGCCTTGGGCGGGTTTGAAAC
CCTAGCAGAAGGCGCGTCCCGGCGGTGATGTGCTGCTTTCCACCTCCAAA
AGCCCATCACCCAAAACAAGCTCGCTCGCCCACCAGCCAAGCACCACGCC
CAAAGGCTTTCCGCGGTCAAAAGGCTGCTCCACTCCCAGAAGCGCCTCTA
ATCTCCCCGCGCTTCGCGATGGGCGCTTCCCCGGGTCAAAGGGGTGATTC
GAAGGTCCACACCATGTCTCGTTTAACTCCTCATGGGAGTCGTTGCTGCT
GCTGCGGTCCTCTGCTCTGTCGCTGCTACTGCTACTGCTACTGCTACTGC
TGTGGTCGTTTTCATGGGCGCTGACGTCTGCGTCGTCTTTGCCGGGGTCG
AAGGGGTGAGTTGCCCCCCAGCCATCATCACTGCTGTCCTCTGGGTCGTC
ACTGCTACTGTTACTGCTGTGGCTGCTGCTGCTGCGGCTGCTGCTGTCCG
TGGCGCTGCCGCTGTCGATGCTGCTGCTACTGCTGTTGTTGCTGCTGCTG
TTACGGTCCCCTGCGCTGTCGCTGTCGATGCTGCTGCTACTGTTGTCGCG
GTCGTCTACACTGGCGCTGCCCACTCCATCGTCCTCACTGCGGTGACCTC
GCACACCGCTCGAGCTGTCGCAGGGATATACGGCGATGACCGGTGACTTG
ATGGCGGCCGCGGTGGCCCAGGCGGAGGCGAGATCGCTCCGGCGGCGACC
GACCACGGCGACGGAATCGCAGGCGCGAGCGGCGGCGCCGACGGGCTCGA
CAGCGGCGGCGGTGGCGGCGGCGAGGACGGTGGCACATGCTGAACCGGCG
GTAGCTTCTGGCTGAACGGCGGCAGAATCAGCCACGGGGACGGCGTCGGG
GACGGCCTCGCAGTCTAGAGCGGCGGCAACGACGGGCTCGACGGCGGCAG
CGGCGGCGGCCGGAACGGTGGTAAAGGCTGAAACGGCGGTTGCTGGCTGG
ACGGCCGCGGCGACAGGAACGGCGTTGCAGGCTTGGGCGGGCTTGTCGGC
GGCGAAGTAAACGGCAGCGCAGTTGGTGAAGTAATCGGTAACGCTGTCGT
AAGAGGCGAGGCTATCGGCGAGGCTGATCGCTGCCTTAACGGTGGGTTCT
GCTTTGGCTGCGTCGATTCTCCACTGTGCTTTCCATATTCCAATTATCAT
GGATGCACACCGCCTTTTGTCCCCCTCCAACTTCCACTCAAATTCTGCAT
GGCGTAGCGTAAACCTTGGGTTCTGGAAGGCAGGGCAGATGCCAGGTTCG
TAGTTTATGACAAACGGAAGCTCACGAAGAAATGCCTCTTGGTGGTTGTA
GGAACGGCTGGCCCACCACGTCTCGATCTCCTGAACCTTTTCCGTAATGA
TTTCGTCCACTCTTTGCCTCAAGTTCTGTTCTATTGTCCTCCAAGCTGCA
AACTCTGCTGCTGTCGTACAACCTAACGGTGCCAATGTCGAGGCTCGCCA
TCGCTCATTTGATATCTGGTTTTCCACATACTCCAGCTCTTCTTGTGTCT
TCCTCCATACTTGTTCTTTACACATAAAATCATCCATCACTACTCACTAC
TTGTTTATGAATGCCGGTACCTCCTCGGCTGTCCAAGCGATGTATTGGGG
TCCGTTTCTCTCTCCCGGATGGCAGGGCGTGGCTTGTGCTCTCTTGCCTC
TAACTGGGCGTGGCTTCTTGCTCTCTTGCCTCTTGCTCTCTTCCGGTTGG
GTTCGTACCTCTCGGTCTCTCGCTGTTATCTTCGATCTTCTTGTCTCCCT
CCGCAGAGCTATGTCGAATGCGGGGTCTTCTTGTTTTTCTCTTGCCTCTA
ACTGGGCGCCTCTTCTTGTTCCTCTTTCTTCCCTCTCTCGCGCTGCGTGC
GTCCGTGGCCTCTCCTGAGTGAGAGGGACTCGTCCACGGGAAGCTCCTTG
TATCTACCTCGGTCGCAAAACCGAACCCTAGCTAACCTTCACACACACGT
CCGTAGACTGTCTAAATCGCTAGCGTAAACGCTGAACGTGTGCATGGGTC
GCTCTTGCTGTTGGGTGAAGTAGAGAGGCCTTCACCAGCCTCACCAAGGA
GTGTATTATTCCATGTCAAACGTACGAGTGAGAGGAGAGGCATCTCCTCT
CTCATCGGCGGGAAACATAATTCCCCGCTTTTCTACCTCTACCTCCCGCA
GCACTATCATCCTAGGTGAGCATGCCTTCTACTCTGTCACCAAACCCATT
ACGCAGATCTCCTCTGGACTACATCTATAGACTGGGCACGAGCACAATTC
GATTAGGATGTTCATAAAAGTATATATATATATATGTAGAGCTCATTTAT
TCGACTCATGTTGAGCCTCCTCACAGCAGTATACCAGTACACAGGAATCG
TGTTTATTTGATCTTCAGTAGGGTAGTATATACCTTGTTCACGCTCAGAT
AGCGCGCACGGAGCGTCCCGACCGACCCCACTGAACGTCCCTCGATCTAC
TCCATGTCTGTCCGGTACACCCTGCAAAAGCGCTTTTTTCCCTGACATTT
ACGATAACCGTCTACTTCTTTCCTCCCCTCCGCCCATGTTTGCTGACCAA
CCGGGATTATTCCCGTCGCACAGGGGGATCGAGCTCAGTAAGTCTGCGTA
CGGTGCGGCTGTCCTAGTTTGCGCTCGCAGTGGTGACACGGGGCGTTCTC
TGTTTCTTTTCAAGGAGGCCGCGAAGCGAGGCGTGCCCCTACTACCTGGA
GATACTGCGGACACAATGCGCGCAGTTTCGAAACAAAGGAACGGTTGGAG
GCAGGCGCTCGCTATCTTTGAAGGCTTCTTGGAGGTCGGATTAGCGCGAG
CAAGGAGCTCCTCGGAAGAGGAGCAGCAGGGTGTTGGTGTTGGTGGTAAA
CGTTCCCCTCAAGGGAGATCCAACAACGATGACGTACCCGGCCCTGCAGT
GGGACAGGGGCAGCTGCTGCACCTTTTGTCCGAGATCATGCCTGGTTGGG
AAGCTGTTTGCCAGGCTGCGCTAGAGGCCTGCACGCGCGGCGGGCAGGTG
ACAACACCACCCGGTTCTTTTTTTATCTCGTTTCGTGTTTGCAGTCGAAC
AGCAAGATGAATAGTCAACTCTCCCCTTCACTTGGCTATCACATCATGTG
TAACATGATGTCCAACTAAAAGCGTCCCTTTCGGATGAACAGCGTTTGTA
TGATCGACAAGTCATACTGATGCGCTTCTTTCCACCCCATGATTTGTGTT
AATCTGGCGAGATATGCTACCCAAAGTAAAAAAAATGTTTGGAATGTCAT
ATCATAGCACCAAGAAACTCTGAGGCAACTCTGAGGCACGTGACCATCAT
CTAGGTATTCTGATGTAACCTATCATTTTTATATTTTTTACTCAAAAGCA
CAGTGGGAGAGGGCCCTCGAGATTCTCAGTATTTTGCGTGCTGGTGGGGG
CGGAGCTGAGCTCAGCAAGGCGGCATACGATGAAGCAATCGAGGTTTGCG
GCAACGGCAGAGCGTGGGATATGGTGCTTCTCCTGGTGGCAGAGATGTCT
AGCGACGAAATTCCCATCAGTGCTGCCGCCTTCGAGACAGCACTGAAGGT
GAGTGAGCATCTGCTGAGGTGTCAAAACAGAGAGGGGGTTGTGTATGTGT
GATCGAGAAAACCTGACGTACGTGCAACGCGTGCATGGGTGACGTTTTGT
GAGGCGGTGCTTAATTTATGCTTCGTGTCGCACAACACCAGCGTGCGAGA
GCAACATGATCGACGAATGCACTCGATACACGCATTCCATCGAAGCGCCC
ACGTCAGCGAGCCTTCACTCGGCTCTTTCTACTGCTGAATTTAGTTCACG
GGTCCAAGTGTTTTTGTTTTGTCCGAATCAGCAAGCGCGTTCTTCGCCTA
GGTTGACCTTCCGCTCGTCGGCTATCATACCGTTATTGTTCAGGGTTGTG
CTGCCACCGGCGCTTGGTCATGGGCCTTATCACTGCTGAGGTGCATGTCC
GTGACCACCGATATTGCGAACGGGGTTCCTTTGAACGCGGCTCACTACCT
TGATGCCCTGCACTCGTGCGCAAACGTGGTGGACAAGCCCGGCGGTCCAC
AGGCGAAGGCGGCCGCGAAAGCTGCGCTGGGGCTTCTACAGGACGCGAGA
GAGACCGGCTGGTTGGTCGGGCGGCAAGGACAAAAATCGTACATGTGCGC
GATGAAGGCTTGCGCTGTAGCACAGGATGCATGGAGCGCTCTCGCCTTGC
TCGACAGTGCCCAAGACGACAGGGTACGGCGGAGCGTCACGCTGAGAACC
GGGGCGATGCAGGCAAGACTACTGCTCTGATCCGGCGTGTCTGGTTTCAT
GAGCAGGCCGTACAATCGTCGGAATCAGATTTTCCCGTAAATTTCAACGG
CGTGCGTATCACAAAGCACGTGCATCTCCTCATTACACACCCGCGTCCGG
TTGTTCAGGCGTGCAGCGGGGCGGGAGAGTGGCGAGCCGCATTGTCTATT
CTCGACGACATGCAAGCAGAAGGGTTGCGACCAGCCGGCGGGGCATACGT
CGCAGCGATGGAGGCTTGTGCGCGGGGGGGTATGATGGACCTCGCGCTCG
AGCTTCTCGACACAGTGCTCCAGGAACACCTCGGCGATGAAAGGGTGAGA
TCGCCTCATGTTCATAGTTTTCAGGCGAATCGAAGAAGAAAGGCACGAGC
ATGATGGCTTGTCTCGCTTCCTACTTGAAAGAAAACTCCGATTTTTGCGT
CTCGCGAACCCGCCGTCTATTATGCCCTTGCAAATTCAGACAAGGGTCAA
GCCATAACGCCTTACCTCTACCTCATCCTGACTCCACGTTCGCAGACAAT
CACCGCCGGCTACCACGGCGCCATACAGGCGTGTGCCAACGGAGGTCAGT
GGGAAGACGCGACCTCGCTTCTTCAAAGAATGCGGCAAGACCCTGTAGCT
GTGGTCACATCCAAAGAGTACAACGCGGCTATTTTGGCGTGTTGTCGGGC
CCAGCAGTCGGTCGCGGCTCTGACACTTTTGGGCGACATGTCTGTCGAAA
CGAACGGCTGTAGGGTGGACGAAACAAGCTATATCCTTGTGATGCGAGCA
TTTGGGCGGGAAGGGAGGTGAGCAAAAGGGTGTCGGTTACACGAAGAGCT
ACCACAGCAGTAACATATTTCCCGGACATATCACCGCTGTGGCATTTTGT
GCGGTCAAGTGAGCAGGGCACTCAAGCTTACTCTCCTCGAAACGCCCGTC
AGGAGTGAATGCGTAAATGCACGAGTTCGCAAACTTCCCAAGGCGTATGA
TGTGTCTATTTTTTTTTGGTGACTTAGATTGCAACAAATATATTTCCTGC
CCAATCTTTTTGTCTTTTTTGTCACTCCTGTGGCTTTTTTTTTCTTTTTA
TTTCATTTTGTGACTTGGCTCTGGACCAGGCTTCCGTTTCTTGTTTTCTT
GTTTCTTGTTCTATTTTTGTACAGCGTTGTGTGATTTCTCGGGGTCCGTT
TTTGTTTTTGCCGGAGTTTCATTGTCGTGCCTTTATTTGGTGGACTGAGG
GGATCTCCCGAGTACTATATACCTCTTTTGGGGCAAGCAGCCTGTGACCA
CGGAAATCGTACCTGATCGGGGGAGTACGGACATTAGAAGGTACTGAGGA
GAGATCGGAATGGTTTTTAATGTGAAGACATTAACAACAAGAACAATCTT
CCGGCAGGTGGCGAACAGTGATTGATCTGATGGGGAGCTTAAAAGAGGAG
GGGGGCTTGGTGCCGACCGTATCAAGCTACAACGTAGTCGTGGAGGCCTT
GGCTAAGACTGGAGAGTGGACGAAAGCCCTCGAGATACTCGCGGAGATGA
AAGAAAATGGGTGTCGACCCACTGAATTTACGTACAGCCGCTGCATGGCA
GGTGAGCCAAATGTACTCGTGTCTTGAAGTGTCGAACAAGCGATAGAATG
CGCGTGATTATGCCGTATGCCTTATTCGTGCCGCGTAATTACCGTTCGTA
TATAGTGCCTCCGGCCAAAGCCAAGGCCACCTTTGACGCAAAAACTCCGG
CGATTCCCGAAACCATCCGTGCCAGGAGAAATGCACAGTACGGAGTAGCT
CGGGCGTACTTGAAACCATGATATCATTTACCTTTAGAACGGATCTCGAA
AAACCACACTCACATTGTTTTACTTTTTGTGATGCACTCCCCGTACTTTG
ACGTATATTATACATTTCAGCATGTGAAAAGAGCGACGAGTGGGAGCAGA
CTCTGGCTCTATTGGCAGACTTGAGGCAGCAGGAGGACATCGTGCCGGAC
AGTTACATCTTTAGCACAGCGATGAAGGCGTGCTCAAAATCGGTAAGTAT
AAAAGCAGGGCTACGCCCTAAGAATCCCTCACTGGGTCGGTTGGTCCTCG
AGGAGCATCATATGCATTCTACTGGACACGAGGCTGCTCTGTTTCCTGGC
TACCTCGTGCGAGACTATTTCAGCGTAGGTGAACTGAAGGCATAATCTAT
TTGACGCCGACGCCTTGATTTGATTTCTTTTTCTGGCTCACCTCGCAGGG
ACGACTGGATGGTGTCCTTGAGATTCTGCAGGAAATGCGAGAGATGTCCG
CCAATAGTGGGCCAAACCTCGTCAACTACAACATCGCCATTGGCTGTTGC
GCGCGCGAGAGGTGAGAGGCGTGCATCACTTCTGTAAAATCACAAGCAAC
ATTTTCCATACCATGTGGTATGGGTGGTGCCGCGTGAGTAGGTGACGCAT
GTACGTCGAAATGGGGGGGTGGCATCACGTGAGCTGAGGGTAATGCACAA
GTTGCTGCTGATGCGGCGAGGACAGCTACAAATTGTACGCTCAGCTCAAT
ATCAATGTTCCGCCCATCCAAGTCCTTCCTTTTACGTGTGCTCTACTTTT
CACAGCTATCCTTGTCGCGCCCTAGGATCACCTCGCTTCAATCGAATCGC
GCATGTATGGCACCGTTTCAGCCGTCACTCGGCTCGAAGCTGTCACACCC
ACCTATCTCAAGTTTACTAGAAAGCGTTTGACTCGTTTTTTCAACTTGTT
CTATGATTTCAACATGCTGCACTGCAAAATGTGTCATTTTCGCACCATAT
TCCAGACAGCAGAGACCATACCAGCATGCTCAACTTCGAAAGTTGTTGTC
GAGACAAAATCCAAGGGTTGAGATTCAGAATGCACTGTCGAGCTTACGTT
CTTGGCCACGCTTTTCCATGCTGAGCTCAGTACCACACTTCTCGTGACAC
AATTTATACCGATTCATTAAAACAAGTGGTCTTCGCGCGATGTTTGGCCC
TTGAGACATCCGGTCATGACTCGGTGTACCCGTTGTCTCGTGGTGTCATG
TTGTGCTTTTGTTCAGGGACTGGACTCGGATGCTTGCAGAGATGGACAGG
ATGCGCCGGGAAGACATTGAACCGGAAGAAAACACCTTTTTCGTGCCCCT
CGATGTCTGCGGAAGGACCGGTAACCTGCCGATGGCCCTCGACCTATTAG
GCCGCATGCGCGAATACGGCGTTGAACCTGGGGTCGTGACCTACGGCTCT
GCCGTTGCCGCAGCGTGTCGGGCGGGAAAGGCAGCGTCGGCAGCGCTTCT
GTTGGATGAGATGACGGCGGCGGGCCATCTGCCGAACGAGAGAACCTACG
GCGTGGCGGCCTTGGCATGTCGGGAGGGGACTAATGCCGACGCGGCGGTG
GACTTGCTGCGACGCATGAAGAAGCAAGGGCTGGCCCCGGATGCACTGGT
TTTGAGCTGTGCGGTGCAGGCATGTTCAAATGCGGGGAACATGGGTCTCG
GGTTAGAGCTCATTACGGAAATGAAGAGAGCTGGGTTTGTCCCCAGTATA
GACTTCTACAACAGCGTGATTGCCGGGATCAATGCCTGGTACGGAACGGC
CCTTCGTTGCACGGAACATGCCGACGTCGATGGCCCGGGGCTGGGAAAAT
ACTAGGTGGCGCGGCAACACACGTGTTTGGATGTAGAGACGTGCACTAAA
TTTTATTTGTTGTTGTGTGCTGGTAGACAATAAAGAGTTTGAAAGAAAGG
GTGCCCTATCGAGGTGGGCTTGACAATCTGTCGTTTAAAACGTTTCAATA
GAGTTAGGTAGCCCGCAGAAACCATCGAAACTACCGTTGCCCTGGGAACG
TCGTAATATATTTTTGTGGGTCGCGAAATATTAGTATTCCTTTCGTTGAG
GAAGTACCATCATCTCACGATCAAAGGGGGGTACGTATTATACTTCACTG
TGTTCGAGTCTATCATGTAGTTAATTTTGGGGTAGAGTTTGGTCTTTGAG
CGTCACAGAGTTGTGGGTGTCCGTATGATGTACGAGTAGTGGCAGGAAGA
GACAGATGAGTGCAAATCACCTTTGGAATTTTTGCAATTATTGTATAAGC
GCTCTCTCTATACGACAGTATTCGAGCAGCATCCGGTTCTATTCCGTTGT
CTGACAATGGCGCCGTTATCACAGGAGACATATTTGCGTTACGTGTCTGC
ACCTAGTTCGTGCTTCGACTGCTGTCATATTCCAGGGCGCGTTCAGCACC
AACGAACGAAAGTATCTATGTCACATCTCGTTTTCAGTCGTGTGCTCCCC
TTGAAGCCGCCGTTCCACAGCGGCACTCGGGAAAACATACTCCGCCCTTT
TCCTCAGGCAGTGCGCTGTGCCAATACCTGAAAAGTCATCGCCAACGTTA
AGGTCGGGAATCGAGTGCCTGCGGGAAAAGAAATGTGCGGCGCGCAGTTT
TCTGATTGGTCTAAGAAATCTTGAGCAGAAAAACTGAACCCTCGACGGAA
GATCCCTTGATGGCGGCTGATGTCATCCAGAGAGAAAGGGAGGATGGAGT
TTTGGACAAGGATGATGACACCTGACTACCGGTAGGGTTTTGATTGGGCG
GTCGCTGCAGGTCGTTACGTGGCGACTTGTTGGTGGACAACCAGTTTGAT
CAATATGATTACAACTAGGGAATCAAAGTAAGTCTGCGAGCGGCGAGTGC
TTTGGTAAATGCGAGTGCAAACCAAAGGTATCACAATACACCATGTACTT
TGGTGCAAACGTTGCTGCTGTCACCTGGGTTTCCTAGGCTACTCGCTCGC
back to topCoding sequence (CDS) from alignment at P-littoralis_Contig133:81034..94233- >mRNA_P-littoralis_Contig133.22.14 ID=mRNA_P-littoralis_Contig133.22.14|Name=mRNA_P-littoralis_Contig133.22.14|organism=Pylaiella littoralis U1_48|type=CDS|length=3195bp|location=Sequence derived from alignment at P-littoralis_Contig133:81034..94233- (Pylaiella littoralis U1_48)
ATGACTCCACGCGTGCAGGCGAGCTGCTTGGTAACGCTCATTTTCATCGT
GGATCGCCCTCCACCAGCACTTGGCTTCACCCGCGGTCCAGTAGGAAAGG
TTCGACCTCGTCCAAGATTCTCTCGCGATCATGTACCTCCCACTGCTGCG
GTGTATCCATCCCGTGAGCCGGAGAGGGTACAGACGTCGCGGACATCACC
CCGAGCCATGCCTTCACCTCCATCCCGGAGATTGTCTCGACCGGATATCG
ACGAGGCGAGCGTTAGGTTGGCCTTGCATGATCTTGAAGTTGCTCAAGCA
AGCAGGCCCCGTGTCGCAGGAGCAGGCATACCGGTAGTTTCAAACGATGA
CGTGTCCTCCTCGCCAAACGCAACAAGCGGCGCGGGTGATGATGTCGATG
TTTTGGCTCGTGTGCAGCGCCACCTTGCTAGCGGGAGTATCATCGGGGCC
ATCTCTGTCCTTGATTCAGCTGCTTCCGACAGAGTTTCAGCGCAGAAAGA
AGCCGGGCCTTGCGCTATCGGTGACGGGTTCAGAGCCATTTTGCAGAGCT
GTGCAAACAGAGGGCTTTGGCGAGAAGCGAGGCAGGTTTTGGTGACCCAC
ATGCCTGCGGCCCAGGTTTGGACAACGGAAGCAGATTGGCTGCAGGTGCT
GGCCGCTTGCGCTGGAGCGGGAGGTTCAGAGCAGGCGGTTTTCCAACTCC
ACGACATGCGAATGAGGGGGATCGAGCTCAGTAAGTCTGCGTACGGTGCG
GCTGTCCTAGTTTGCGCTCGCAGTGGTGACACGGGGCGTTCTCTGTTTCT
TTTCAAGGAGGCCGCGAAGCGAGGCGTGCCCCTACTACCTGGAGATACTG
CGGACACAATGCGCGCAGTTTCGAAACAAAGGAACGGTTGGAGGCAGGCG
CTCGCTATCTTTGAAGGCTTCTTGGAGGTCGGATTAGCGCGAGCAAGGAG
CTCCTCGGAAGAGGAGCAGCAGGGTGTTGGTGTTGGTGGTAAACGTTCCC
CTCAAGGGAGATCCAACAACGATGACGTACCCGGCCCTGCAGTGGGACAG
GGGCAGCTGCTGCACCTTTTGTCCGAGATCATGCCTGGTTGGGAAGCTGT
TTGCCAGGCTGCGCTAGAGGCCTGCACGCGCGGCGGGCAGTGGGAGAGGG
CCCTCGAGATTCTCAGTATTTTGCGTGCTGGTGGGGGCGGAGCTGAGCTC
AGCAAGGCGGCATACGATGAAGCAATCGAGGTTTGCGGCAACGGCAGAGC
GTGGGATATGGTGCTTCTCCTGGTGGCAGAGATGTCTAGCGACGAAATTC
CCATCAGTGCTGCCGCCTTCGAGACAGCACTGAAGGGTTGTGCTGCCACC
GGCGCTTGGTCATGGGCCTTATCACTGCTGAGGTGCATGTCCGTGACCAC
CGATATTGCGAACGGGGTTCCTTTGAACGCGGCTCACTACCTTGATGCCC
TGCACTCGTGCGCAAACGTGGTGGACAAGCCCGGCGGTCCACAGGCGAAG
GCGGCCGCGAAAGCTGCGCTGGGGCTTCTACAGGACGCGAGAGAGACCGG
CTGGTTGGTCGGGCGGCAAGGACAAAAATCGTACATGTGCGCGATGAAGG
CTTGCGCTGTAGCACAGGATGCATGGAGCGCTCTCGCCTTGCTCGACAGT
GCCCAAGACGACAGGGTACGGCGGAGCCACGTGCATCTCCTCATTACACA
CCCGCGTCCGGTTGTTCAGGCGTGCAGCGGGGCGGGAGAGTGGCGAGCCG
CATTGTCTATTCTCGACGACATGCAAGCAGAAGGGTTGCGACCAGCCGGC
GGGGCATACGTCGCAGCGATGGAGGCTTGTGCGCGGGGGGGTATGATGGA
CCTCGCGCTCGAGCTTCTCGACACAGTGCTCCAGGAACACCTCGGCGATG
AAAGGACAATCACCGCCGGCTACCACGGCGCCATACAGGCGTGTGCCAAC
GGAGGTCAGTGGGAAGACGCGACCTCGCTTCTTCAAAGAATGCGGCAAGA
CCCTGTAGCTGTGGTCACATCCAAAGAGTACAACGCGGCTATTTTGGCGT
GTTGTCGGGCCCAGCAGTCGGTCGCGGCTCTGACACTTTTGGGCGACATG
TCTGTCGAAACGAACGGCTGTAGGGTGGACGAAACAAGCTATATCCTTGT
GATGCGAGCATTTGGGCGGGAAGGGAGGTGGCGAACAGTGATTGATCTGA
TGGGGAGCTTAAAAGAGGAGGGGGGCTTGGTGCCGACCGTATCAAGCTAC
AACGTAGTCGTGGAGGCCTTGGCTAAGACTGGAGAGTGGACGAAAGCCCT
CGAGATACTCGCGGAGATGAAAGAAAATGGGTGTCGACCCACTGAATTTA
CGTACAGCCGCTGCATGGCAGCATGTGAAAAGAGCGACGAGTGGGAGCAG
ACTCTGGCTCTATTGGCAGACTTGAGGCAGCAGGAGGACATCGTGCCGGA
CAGTTACATCTTTAGCACAGCGATGAAGGCGTGCTCAAAATCGGGACGAC
TGGATGGTGTCCTTGAGATTCTGCAGGAAATGCGAGAGATGTCCGCCAAT
AGTGGGCCAAACCTCGTCAACTACAACATCGCCATTGGCTGTTGCGCGCG
CGAGAGGGACTGGACTCGGATGCTTGCAGAGATGGACAGGATGCGCCGGG
AAGACATTGAACCGGAAGAAAACACCTTTTTCGTGCCCCTCGATGTCTGC
GGAAGGACCGGTAACCTGCCGATGGCCCTCGACCTATTAGGCCGCATGCG
CGAATACGGCGTTGAACCTGGGGTCGTGACCTACGGCTCTGCCGTTGCCG
CAGCGTGTCGGGCGGGAAAGGCAGCGTCGGCAGCGCTTCTGTTGGATGAG
ATGACGGCGGCGGGCCATCTGCCGAACGAGAGAACCTACGGCGTGGCGGC
CTTGGCATGTCGGGAGGGGACTAATGCCGACGCGGCGGTGGACTTGCTGC
GACGCATGAAGAAGCAAGGGCTGGCCCCGGATGCACTGGTTTTGAGCTGT
GCGGTGCAGGCATGTTCAAATGCGGGGAACATGGGTCTCGGGTTAGAGCT
CATTACGGAAATGAAGAGAGCTGGGTTTGTCCCCAGTATAGACTTCTACA
ACAGCGTGATTGCCGGGATCAATGCCTGGTACGGAACGGCCCTTCGTTGC
ACGGAACATGCCGACGTCGATGGCCCGGGGCTGGGAAAATACTAG back to top
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