mRNA_P-littoralis_Contig133.14.8 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig133.14.8
Unique NamemRNA_P-littoralis_Contig133.14.8
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig133.14.8 vs. uniprot
Match: A0A6H5JN08_9PHAE (BTB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN08_9PHAE)

HSP 1 Score: 697 bits (1799), Expect = 1.030e-234
Identity = 486/898 (54.12%), Postives = 551/898 (61.36%), Query Frame = 1
Query:   10 MAEIQWGPWSGVLQGSPTGFPAASTHSAWSLSASDLEMLQKASRILYSFSHHTMLSMLTDSALSDVCLVVEGIEVPSHKAVLAAWSRPFRAMFTLPMLESRHQCRVVIEDAEHKHLMVVLHYLYGGRIGLNDKNVMPVSALANRYEVLPLVAQCEGFMKKRLNPSSVCQQLLAAEEHRVPKAAAFALEFLAVHFDEVCHDSSRDFNSLGGDTVLRVLQHNGLTADEETVFLAVDGWAKGWRHRRAIRGARPNFEAVRPLSPAEAGPATTQMPGGASTTNRGPSSSRSSVQKTLSAGDFPAPKKAWQDA--QDTDRQCCIGTGGGGGAMEHDRLERTKGIATRRSEKDGPSMAPLAVVATAAPTVSAP-AVSAATVARAAXXXXXXXRKAQQEQ-HAVGQGPLIAAXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------ASTDDTTGLPSSPDF----ACFTTPTPTA-----------AAGIGGRGCSGNVGQ-LLTMAVGEEAGKGEAGGTVRGLPQRRAGGPAEGTERRGRCARRELEPGASFPPSPPRLQRSVEDAKKGAAVVVARGSSAAADAVADPGTEASKTVEASEAVTSMPEEERDSVDGLLEEVRFPLISTSFLCQVVEKSLAMTGSRVAHKLLHEAYRFQAMTSADAVDVDEHFPGNHRVKPALAPAGVPVGRAPLCRRSWPSQAAHTAIIASVCLMSLTNGACSCPLLGMFGVAGAMHENEQYRGHERVLFGEEDGCVGTVDDFSSSLSEVHVVDNVKRKDEKYWLPGQPEEAYFCVRLDRVRRVTKVRFQNRYSEEFEVAVRRTLNEEWQVIVPRRCSGGHKDIQEINLTRKRVKARHVKISLRGRKRSCYNTSCYWTELLGF 2547
            MA+I+WGPWSG  + S    PA   +SAWSL   DL  LQK           TMLSMLTD ALSDVCLVVE I+VP HKAVLAAWSRPFRAMFTLPMLESRHQCRVVIEDAEHKHLMVVLHYLY G IGLND+NVMPVSALANRYEVLPL+AQCEG+MK RL+PS+V   LL+AEEHRVPKAAAFALE+LAVHFDEV HD S DFNSLGGDTVLRVLQH+GLT DEETVFLAVDGWAK W HRR+IRGA  N+   R   PA A   T Q  G  ST+ RG SSS S V+KTLSA DFP           QDTD Q      GGGGA    R       ++   EK+     P ++     P + A   + + T   +A       R+       ++G       XXXXXXXXXXXXXXXXXXXXXXXX                                      T  PSS          TT + TA           A G+GGRG  G   +   TM VG+E  KG A G    + QRRA G A G  ++G  A   L+  ASF   P      V + +K AA V +  SS+  + + D G    +T+        +PEEE+  VD LL EVRFPL+STSFLCQVVEKS  +TGSRVA +LLHEAYRFQA+   D VDVDE FPGNHRVK                                                              YRGHERVLFGE++GCVG V+D+SSSLSEVH+V+NVK++DEKYWLPGQPEEAYFCVRLDRVRR+TK R QNRYSEEFEVAVRRT  EEWQVIVPR+ SGGHKD++ ++LTRKRVKARHVKISLRGR RSCYNTSCYW ELLGF
Sbjct:    1 MAKIRWGPWSGASRKSHR-IPAR--NSAWSLD-DDLVGLQK-----------TMLSMLTDPALSDVCLVVEDIDVPCHKAVLAAWSRPFRAMFTLPMLESRHQCRVVIEDAEHKHLMVVLHYLYSGCIGLNDQNVMPVSALANRYEVLPLMAQCEGYMKWRLHPSNVVAHLLSAEEHRVPKAAAFALEYLAVHFDEVHHDGSGDFNSLGGDTVLRVLQHDGLTVDEETVFLAVDGWAKAWEHRRSIRGATRNYAVGRSPPPAVAEQGT-QAVGVGSTSKRGSSSSHS-VKKTLSATDFPPSTSTTVPGRVQDTDEQ------GGGGAGSGARSVVRDAASSASLEKN-----PRSLNGRERPDLGAGFTLRSTTEGTSAQSRVGGTRETDSRGGSSIGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRLRGEEQAVTRRPSSSTGPTCNVSITTASNTAMRDTRSDASPGARGLGGRGSIGGASEGRSTMDVGDEPPKGVAEGEAGRVLQRRASGSAGGEGKQGGYAGEVLQRAASFWHPPXXXXXXVANVRK-AAAVSSPNSSSPIEGMTDEGKGTLETM------VPIPEEEQAFVDELLMEVRFPLVSTSFLCQVVEKSPVITGSRVAQRLLHEAYRFQAIRP-DGVDVDELFPGNHRVK--------------------------------------------------------------YRGHERVLFGEDEGCVGHVEDYSSSLSEVHLVENVKQRDEKYWLPGQPEEAYFCVRLDRVRRITKFRLQNRYSEEFEVAVRRTRREEWQVIVPRQTSGGHKDVKSLDLTRKRVKARHVKISLRGRTRSCYNTSCYWVELLGF 800          
BLAST of mRNA_P-littoralis_Contig133.14.8 vs. uniprot
Match: D7FIB0_ECTSI (BTB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIB0_ECTSI)

HSP 1 Score: 495 bits (1275), Expect = 1.860e-161
Identity = 328/709 (46.26%), Postives = 368/709 (51.90%), Query Frame = 1
Query:  169 MLSMLTDSALSDVCLVVEGIEVPSHKAVLAAWSRPFRAMFTLPMLESRHQCRVVIEDAEHKHLMVVLHYLYGGRIGLNDKNVMPVSALANRYEVLPLVAQCEGFMKKRLNPSSVCQQLLAAEEHRVPKAAAFALEFLAVHFDEVCHDSSRDFNSLGGDTVLRVLQHNGLTADEETVFLAVDGWAKGWRHRRAIRGARPNFEAVRPLSPAEAGPATTQMPGGASTTNRGPSSSRSSVQKTLSAGDFPAPKKAWQDAQDTDRQCCIGTGGGGGAMEHDRLERTKGIATRRSEKDGPSMAPLAVVATAAPTVSAPAVSAATVARAAXXXXXXXRKAQQEQHAVGQGPLIAAXXXXXXXXXXXXXXXXXXXXXXXXASTDDTTGLPSSPDFACFTTPTPTAAAGIGGRGCSGNVGQ-LLTMAVGEEAGKGEAGGTVRGLPQRRAGGPAEGTERRGRCARRELEPGASFPPSPPRLQRSVEDAKKGAAVVVARGSSAAADAVADPGTEASKTVEASEAVTSMPEEERDSVDGLLEEVRFPLISTSFLCQVVEKSLAMTGSRVAHKLLHEAYRFQAMTSADAVDVDEHFPGNHRVKPALAPAGVPVGRAPLCRRSWPSQAAHTAIIASVCLMSLTNGACSCPLLGMFGVAGAMHENEQYRGHERVLFGEEDGCVGTVDDFSSSLSEVHVVDNVKRKDEKYWLPGQPEEAYFCVRL 2292
            MLSMLTD ALSDVCLVVEGI+VP HKAVLAAWSRPFRAMFTLPMLESRHQCRVVIEDAEHKHLMVVLHYLY GRIGLND+NVMPVSALANRYEVLPL+AQCEG+MK RL+PS+V   LL+AEEHRVPKAAAFALE+LAVHFDEV HDSS DFNSLGGDTVLRVLQH+GLT DEETVFLAVDGWAK W HRR+IRGA  N+                                        + G  P P  A QDA                                                                                                                                SP            A G GGR  +G  G+   TM VG+E  KG A G    + QRRA GPA G  ++G          ASF   PP  +  V   +K AAV     SS+  + + D   E   T+E    +  +PEEE+  VD LL EVRFPL+STSFLCQVVEKS  +TGSRVA +LLHEAYRFQA+   D VDVDE FPGNHRVK                                                              YRGHERVLFGE++GCVG V+D+SSSLSEVH+V+NVK++DEKYWLPGQPEEAYFCVR+
Sbjct:    1 MLSMLTDPALSDVCLVVEGIDVPCHKAVLAAWSRPFRAMFTLPMLESRHQCRVVIEDAEHKHLMVVLHYLYSGRIGLNDQNVMPVSALANRYEVLPLMAQCEGYMKWRLHPSNVVAHLLSAEEHRVPKAAAFALEYLAVHFDEVHHDSSGDFNSLGGDTVLRVLQHDGLTVDEETVFLAVDGWAKAWEHRRSIRGATRNY----------------------------------------AVGRSPPPAVAEQDA--------------------------------------------------------------------------------------------------------------------------------SP-----------GARGWGGRESNGGAGEERSTMDVGDEPPKGLAEGEAGRVLQRRASGPAGGEGKQGGYXXXXXXXAASFSHPPPXXEPPVAGVRKTAAVGAPE-SSSPIEGMTD---ERKGTLET---MAPIPEEEQAFVDELLMEVRFPLVSTSFLCQVVEKSPVITGSRVAQRLLHEAYRFQAIRP-DGVDVDELFPGNHRVK--------------------------------------------------------------YRGHERVLFGEDEGCVGHVEDYSSSLSEVHLVENVKQRDEKYWLPGQPEEAYFCVRV 460          
BLAST of mRNA_P-littoralis_Contig133.14.8 vs. uniprot
Match: A0A0G4IUZ9_PLABS (BTB domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IUZ9_PLABS)

HSP 1 Score: 107 bits (267), Expect = 1.390e-20
Identity = 65/181 (35.91%), Postives = 97/181 (53.59%), Query Frame = 1
Query:  178 MLTDSALSDVCLVVEGIEVPSHKAVLAAWSRPFRAMFTLPMLESRHQCRVVIEDAEHKHLMVVLHYLYGGRIGLNDKNVMPVSALANRYEVLPLVAQCEGFMKKRLNPSSVCQQLLAAEEHRVPKAAAFALEFLAVHFDEVCHDSSRDFNSLGGDTVLRVLQHNGLTA-DEETVFLAVDGW 717
            ++ ++ LSDV  + +G  V +H+ VLAAWS PFR MFT    ESR   ++ +E A+   L ++L ++Y G I L     +PV ALANRY V+PL    E F++++L+  + C  L AA+     +      EF    F+     S+R F  L  D + ++L  N L    EE VF A+  W
Sbjct:   51 LVNNALLSDVTFMADGQVVHAHRLVLAAWSAPFRVMFTNGWAESR-MAQIEVEAADVDALKLMLEFMYTGSIHLEPHMALPVLALANRYAVVPLQRIAEQFIEQQLDVGNCCLFLSAADRFNCDRLRQICFEFTVEQFEAA--SSTRGFLLLSTDCMRQLLHSNDLVVCSEEVVFRALSTW 228          
BLAST of mRNA_P-littoralis_Contig133.14.8 vs. uniprot
Match: A0A8C6U2F0_9GOBI (Kelch-like family member 6 n=1 Tax=Neogobius melanostomus TaxID=47308 RepID=A0A8C6U2F0_9GOBI)

HSP 1 Score: 102 bits (253), Expect = 2.210e-18
Identity = 67/193 (34.72%), Postives = 101/193 (52.33%), Query Frame = 1
Query:  169 MLSMLTDSALSDVCLVVEGIEVPSHKAVLAAWSRPFRAMFTLPMLESRHQCRVVIEDAEHKHLMVVLHYLYGGRIGLNDKNVMPVSALANRYEVLPLVAQCEGFMKKRLNPSSVCQQLLAAEEHRVPKAAAFALEFLAVHFDEVCHDSSRDFNSLGGDTVLRVLQHNGLTAD-EETVFLAVDGWAKGWRHRRA 744
            M ++  +  L+DV L V+G + P H+AVLAA S  FRAMF   + ES H+ RV ++  E   +  +L Y Y GR  + + NV  +   A++++ L +V  C GF+ K L+  S  + L  AE H +      A +F+   F +V   + RDF  L  DT+  VLQ + L    EE VF A+  W +     R+
Sbjct:  100 MENLRVNRELTDVILSVQGEDFPCHRAVLAAASHYFRAMFCSGLRES-HEERVEMKGLESATMRTLLDYTYTGRALITESNVQRILEAASQFQFLRVVEACAGFLSKALHLDSCVEILNLAESHAITSLKTTAQDFIISQFAKVA--AQRDFLELPADTLETVLQRDDLNVTFEEFVFDALMRWVRAKPEERS 289          
BLAST of mRNA_P-littoralis_Contig133.14.8 vs. uniprot
Match: UPI0015E22DB4 (LOW QUALITY PROTEIN: kelch-like protein 6 n=2 Tax=Percomorphaceae TaxID=1489872 RepID=UPI0015E22DB4)

HSP 1 Score: 99.0 bits (245), Expect = 1.710e-17
Identity = 66/192 (34.38%), Postives = 99/192 (51.56%), Query Frame = 1
Query:  169 MLSMLTDSALSDVCLVVEGIEVPSHKAVLAAWSRPFRAMFTLPMLESRHQCRVVIEDAEHKHLMVVLHYLYGGRIGLNDKNVMPVSALANRYEVLPLVAQCEGFMKKRLNPSSVCQQLLAAEEHRVPKAAAFALEFLAVHFDEVCHDSSRDFNSLGGDTVLRVLQHNGLTAD-EETVFLAVDGWAKGWRHRR 741
            M ++  +  L+DV L V+G + P H+A+LAA S  FRAMF   + ES H+ RV I+  +   +  +L Y Y  R  L   NV  +   A++++ L +V  C GF+ K L+  S    L  AE H +P     A +++  HF EV     +DF  L  D++  VLQ + L    EE VF A+  W +  +  R
Sbjct:   50 METLRVNRELTDVVLCVQGHDFPCHRAILAAASHYFRAMFCSGLKES-HEERVEIKGLDSGTMRSLLEYTYTSRAILTHSNVQRILEAASQFQFLRVVDACAGFLNKSLHLESCIGILNLAESHALPALKTGAQDYITSHFSEVVQQ--QDFLDLPADSLENVLQCDKLDVKCEECVFEALMRWVRAQQDER 238          
BLAST of mRNA_P-littoralis_Contig133.14.8 vs. uniprot
Match: A0A4Z2FEY0_9TELE (Kelch-like protein 6 n=1 Tax=Liparis tanakae TaxID=230148 RepID=A0A4Z2FEY0_9TELE)

HSP 1 Score: 95.9 bits (237), Expect = 5.490e-17
Identity = 69/198 (34.85%), Postives = 102/198 (51.52%), Query Frame = 1
Query:  169 MLSMLTDSALSDVCLVVEGIEVPSHKAVLAAWSRPFRAMFTLPMLESRHQCRVVIEDAEHKHLMVVLHYLYGGRIGLNDKNVMPVSALANRYEVLPLVAQCEGFMKKRLNPSSVCQQLLAAEEHRVPKAAAFALEFLAVHFDEVCHDSSRDFNSLGGDTVLRVLQHNGLTAD-EETVFLAVDGW--AKGWRHRRAIRG 753
            M ++  +  L+DV L V+G + P H+AVLAA S+ FRAMF   + ESR + RV I+  +   +  +L Y Y  R  L + NV      A++++ L +V  C  F+ K L   S    L  A+ H +P   A A +++A HF +V      DF  L   ++  VLQ + L A  EE VF A+  W  A+    R A+ G
Sbjct:   50 METLRVNGELTDVVLCVQGHDFPCHRAVLAAASQYFRAMFCRGLKESR-EARVEIKGLDSGTMHSLLEYTYTSRALLTNSNVQRTLEAASQFQFLRVVDACADFLSKSLQLESCIGILSLADSHALPALRAGARDYIATHFSQVVRQP--DFLELPAPSLEAVLQRDDLDARCEECVFEALMLWVRARPEERRPALAG 244          
BLAST of mRNA_P-littoralis_Contig133.14.8 vs. uniprot
Match: A0A7J5Y333_DISMA (BTB domain-containing protein n=9 Tax=Eupercaria TaxID=1489922 RepID=A0A7J5Y333_DISMA)

HSP 1 Score: 97.1 bits (240), Expect = 6.780e-17
Identity = 65/192 (33.85%), Postives = 98/192 (51.04%), Query Frame = 1
Query:  169 MLSMLTDSALSDVCLVVEGIEVPSHKAVLAAWSRPFRAMFTLPMLESRHQCRVVIEDAEHKHLMVVLHYLYGGRIGLNDKNVMPVSALANRYEVLPLVAQCEGFMKKRLNPSSVCQQLLAAEEHRVPKAAAFALEFLAVHFDEVCHDSSRDFNSLGGDTVLRVLQHNGLTAD-EETVFLAVDGWAKGWRHRR 741
            M ++  +  L+DV L V+G + P H+A+LAA S  FRAMF   + ES H+ RV I+  +   +  +L Y Y  R  L   NV  +   A++++ L +V  C GF+ K L+  S    L  AE H +P     A +F+   F +V     +DF  L  D++  VLQ + L    EE VF A+  W +  +  R
Sbjct:   50 METLRVNRELTDVVLRVQGHDFPCHRAILAAASHYFRAMFCNGLKES-HEERVEIKGLDSGTMHSLLEYTYTSRALLTHSNVQRILEAASQFQFLRVVEACAGFLSKSLHLESCIGILNLAESHALPALKTSAQDFITTQFSQVVQQ--QDFLELPADSLEAVLQRDDLDVKCEECVFEALMHWVRAQQDER 238          
BLAST of mRNA_P-littoralis_Contig133.14.8 vs. uniprot
Match: A0A673AUH6_9TELE (Kelch like family member 6 n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673AUH6_9TELE)

HSP 1 Score: 97.1 bits (240), Expect = 6.870e-17
Identity = 65/198 (32.83%), Postives = 102/198 (51.52%), Query Frame = 1
Query:  169 MLSMLTDSALSDVCLVVEGIEVPSHKAVLAAWSRPFRAMFTLPMLESRHQCRVVIEDAEHKHLMVVLHYLYGGRIGLNDKNVMPVSALANRYEVLPLVAQCEGFMKKRLNPSSVCQQLLAAEEHRVPKAAAFALEFLAVHFDEVCHDSSRDFNSLGGDTVLRVLQHNGLTAD-EETVFLAVDGWAKGWRHRRAIRGAR 759
            M ++  +  L+DV L V+G + P H+A+LAA S+ FRAMF   + ES H+ R+ I+  +   +  +L Y Y  R  L   NV  +   +++++ L +V  C GF+ K L+  S    L  AE H +P   A A +++   F +V     +DF  L  D++  VLQ + L    EE VF A+  W +  +  R    AR
Sbjct:   50 METLRVNKELTDVTLCVQGHDFPCHRAILAAASQYFRAMFCSGLKES-HEERIEIKGLDSGTMRSLLDYTYTSRAQLTHSNVQRILEASSQFQFLRVVDACSGFLSKSLHLESCIGILNLAESHALPDLKAKAEDYITFQFSQVVQQ--QDFLELPADSLETVLQRDDLDVTCEEFVFEALMRWVRARQDERRPLVAR 244          
BLAST of mRNA_P-littoralis_Contig133.14.8 vs. uniprot
Match: A0A1A8UTI9_NOTFU (Kelch like family member 6 n=11 Tax=Nothobranchiidae TaxID=405002 RepID=A0A1A8UTI9_NOTFU)

HSP 1 Score: 95.5 bits (236), Expect = 2.090e-16
Identity = 62/194 (31.96%), Postives = 101/194 (52.06%), Query Frame = 1
Query:  169 MLSMLTDSALSDVCLVVEGIEVPSHKAVLAAWSRPFRAMFTLPMLESRHQCRVVIEDAEHKHLMVVLHYLYGGRIGLNDKNVMPVSALANRYEVLPLVAQCEGFMKKRLNPSSVCQQLLAAEEHRVPKAAAFALEFLAVHFDEVCHDSSRDFNSLGGDTVLRVLQHNGLTAD-EETVFLAVDGWAKGWRHRRAI 747
            M +M  +  L+DV L V+G + P H+A+LAA S+ FRAMF   + ES H+ RV ++  +   +  +L Y Y  R  L   NV  +   AN+++ L +V  C  F+ + ++  S    L  A+ H +P     A +F+A  F +V     +DF  L  +++  +LQ + L    EE VF AV  W +  + R ++
Sbjct:   50 METMRVNGELTDVTLSVQGHDFPCHRAILAAASQYFRAMFCSGLRES-HEKRVEMKGLDSGTMHSLLEYTYTSRALLTHSNVQKILEAANQFQFLRVVDACASFLSRSIHLESCVGILNLADSHALPALKTRAQDFIASQFSQVLQQ--QDFLELPAESLEAILQRDDLEVKCEECVFEAVMRWLRARQDRSSL 240          
BLAST of mRNA_P-littoralis_Contig133.14.8 vs. uniprot
Match: A0A3Q3XDD7_MOLML (Kelch-like family member 6 n=1 Tax=Mola mola TaxID=94237 RepID=A0A3Q3XDD7_MOLML)

HSP 1 Score: 95.5 bits (236), Expect = 2.090e-16
Identity = 64/192 (33.33%), Postives = 101/192 (52.60%), Query Frame = 1
Query:  169 MLSMLTDSALSDVCLVVEGIEVPSHKAVLAAWSRPFRAMFTLPMLESRHQCRVVIEDAEHKHLMVVLHYLYGGRIGLNDKNVMPVSALANRYEVLPLVAQCEGFMKKRLNPSSVCQQLLAAEEHRVPKAAAFALEFLAVHFDEVCHDSSRDFNSLGGDTVLRVLQHNGLTAD-EETVFLAVDGWAKGWRHRR 741
            M ++  +  L+DV L V+G + P H+A+LAA S+ FRAMF   + ES H+ RV I+  + K + V+L Y Y  +  L   NV  +   A+ ++ L +V  C  F+ K L+  S    L  AE H +      AL+++A  F  V     +DF  L  +++  VLQ + L  + EE VF A+  W +  + +R
Sbjct:   50 MENLRVNRELTDVVLCVQGHDFPCHRAILAAASQYFRAMFCSGLRES-HEERVEIKGFDSKTMSVLLEYTYTSQTHLTHSNVQRILEAASHFQFLRVVDACASFLSKSLHLDSCIGILSLAESHVLTALKTTALDYIASQFSLVVQQ--QDFLELPAESLETVLQRDDLDVNCEEYVFEALMRWVRAQQDQR 238          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig133.14.8 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JN08_9PHAE1.030e-23454.12BTB domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FIB0_ECTSI1.860e-16146.26BTB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A0G4IUZ9_PLABS1.390e-2035.91BTB domain-containing protein n=1 Tax=Plasmodiopho... [more]
A0A8C6U2F0_9GOBI2.210e-1834.72Kelch-like family member 6 n=1 Tax=Neogobius melan... [more]
UPI0015E22DB41.710e-1734.38LOW QUALITY PROTEIN: kelch-like protein 6 n=2 Tax=... [more]
A0A4Z2FEY0_9TELE5.490e-1734.85Kelch-like protein 6 n=1 Tax=Liparis tanakae TaxID... [more]
A0A7J5Y333_DISMA6.780e-1733.85BTB domain-containing protein n=9 Tax=Eupercaria T... [more]
A0A673AUH6_9TELE6.870e-1732.83Kelch like family member 6 n=1 Tax=Sphaeramia orbi... [more]
A0A1A8UTI9_NOTFU2.090e-1631.96Kelch like family member 6 n=11 Tax=Nothobranchiid... [more]
A0A3Q3XDD7_MOLML2.090e-1633.33Kelch-like family member 6 n=1 Tax=Mola mola TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig133contigP-littoralis_Contig133:44014..53359 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FIB0
PFAMsBACK,BTB,Kelch_1
Model size3374
Max annot lvl2759|Eukaryota
KEGG koko:K10461,ko:K10463
Hectar predicted targeting categoryother localisation
Exons12
Evalue1.68e-165
EggNOG OGsKOG4441@1|root,KOG4441@2759|Eukaryota
Ec32 ortholog descriptionBTB/Kelch-associated
Ec32 orthologEc-11_001220.1
Descriptionprotein ubiquitination
Cds size2541
COG categoryKLT
BRITEko00000,ko04121
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789608.5319142-UTR-P-littoralis_Contig133:44013..448371680789608.5319142-UTR-P-littoralis_Contig133:44013..44837Pylaiella littoralis U1_48UTRP-littoralis_Contig133 44014..44837 -
1680789608.6732016-UTR-P-littoralis_Contig133:53350..533591680789608.6732016-UTR-P-littoralis_Contig133:53350..53359Pylaiella littoralis U1_48UTRP-littoralis_Contig133 53351..53359 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789608.5460227-CDS-P-littoralis_Contig133:44837..449991680789608.5460227-CDS-P-littoralis_Contig133:44837..44999Pylaiella littoralis U1_48CDSP-littoralis_Contig133 44838..44999 -
1680789608.560634-CDS-P-littoralis_Contig133:45577..456761680789608.560634-CDS-P-littoralis_Contig133:45577..45676Pylaiella littoralis U1_48CDSP-littoralis_Contig133 45578..45676 -
1680789608.573462-CDS-P-littoralis_Contig133:46354..464381680789608.573462-CDS-P-littoralis_Contig133:46354..46438Pylaiella littoralis U1_48CDSP-littoralis_Contig133 46355..46438 -
1680789608.5840542-CDS-P-littoralis_Contig133:46743..470131680789608.5840542-CDS-P-littoralis_Contig133:46743..47013Pylaiella littoralis U1_48CDSP-littoralis_Contig133 46744..47013 -
1680789608.598755-CDS-P-littoralis_Contig133:47143..472801680789608.598755-CDS-P-littoralis_Contig133:47143..47280Pylaiella littoralis U1_48CDSP-littoralis_Contig133 47144..47280 -
1680789608.6076987-CDS-P-littoralis_Contig133:47585..486901680789608.6076987-CDS-P-littoralis_Contig133:47585..48690Pylaiella littoralis U1_48CDSP-littoralis_Contig133 47586..48690 -
1680789608.615659-CDS-P-littoralis_Contig133:48990..490861680789608.615659-CDS-P-littoralis_Contig133:48990..49086Pylaiella littoralis U1_48CDSP-littoralis_Contig133 48991..49086 -
1680789608.6237247-CDS-P-littoralis_Contig133:49871..499821680789608.6237247-CDS-P-littoralis_Contig133:49871..49982Pylaiella littoralis U1_48CDSP-littoralis_Contig133 49872..49982 -
1680789608.6337843-CDS-P-littoralis_Contig133:50507..506071680789608.6337843-CDS-P-littoralis_Contig133:50507..50607Pylaiella littoralis U1_48CDSP-littoralis_Contig133 50508..50607 -
1680789608.6420867-CDS-P-littoralis_Contig133:50923..510531680789608.6420867-CDS-P-littoralis_Contig133:50923..51053Pylaiella littoralis U1_48CDSP-littoralis_Contig133 50924..51053 -
1680789608.6508062-CDS-P-littoralis_Contig133:52452..525431680789608.6508062-CDS-P-littoralis_Contig133:52452..52543Pylaiella littoralis U1_48CDSP-littoralis_Contig133 52453..52543 -
1680789608.6599007-CDS-P-littoralis_Contig133:53194..533501680789608.6599007-CDS-P-littoralis_Contig133:53194..53350Pylaiella littoralis U1_48CDSP-littoralis_Contig133 53195..53350 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig133.14.8prot_P-littoralis_Contig133.14.8Pylaiella littoralis U1_48polypeptideP-littoralis_Contig133 44838..53350 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig133.14.8

>prot_P-littoralis_Contig133.14.8 ID=prot_P-littoralis_Contig133.14.8|Name=mRNA_P-littoralis_Contig133.14.8|organism=Pylaiella littoralis U1_48|type=polypeptide|length=847bp
MAEIQWGPWSGVLQGSPTGFPAASTHSAWSLSASDLEMLQKASRILYSFS
HHTMLSMLTDSALSDVCLVVEGIEVPSHKAVLAAWSRPFRAMFTLPMLES
RHQCRVVIEDAEHKHLMVVLHYLYGGRIGLNDKNVMPVSALANRYEVLPL
VAQCEGFMKKRLNPSSVCQQLLAAEEHRVPKAAAFALEFLAVHFDEVCHD
SSRDFNSLGGDTVLRVLQHNGLTADEETVFLAVDGWAKGWRHRRAIRGAR
PNFEAVRPLSPAEAGPATTQMPGGASTTNRGPSSSRSSVQKTLSAGDFPA
PKKAWQDAQDTDRQCCIGTGGGGGAMEHDRLERTKGIATRRSEKDGPSMA
PLAVVATAAPTVSAPAVSAATVARAAAGAGAAARKAQQEQHAVGQGPLIA
AASAAAASTATTTATAAAAAAAAANASTDDTTGLPSSPDFACFTTPTPTA
AAGIGGRGCSGNVGQLLTMAVGEEAGKGEAGGTVRGLPQRRAGGPAEGTE
RRGRCARRELEPGASFPPSPPRLQRSVEDAKKGAAVVVARGSSAAADAVA
DPGTEASKTVEASEAVTSMPEEERDSVDGLLEEVRFPLISTSFLCQVVEK
SLAMTGSRVAHKLLHEAYRFQAMTSADAVDVDEHFPGNHRVKPALAPAGV
PVGRAPLCRRSWPSQAAHTAIIASVCLMSLTNGACSCPLLGMFGVAGAMH
ENEQYRGHERVLFGEEDGCVGTVDDFSSSLSEVHVVDNVKRKDEKYWLPG
QPEEAYFCVRLDRVRRVTKVRFQNRYSEEFEVAVRRTLNEEWQVIVPRRC
SGGHKDIQEINLTRKRVKARHVKISLRGRKRSCYNTSCYWTELLGF*
back to top

mRNA from alignment at P-littoralis_Contig133:44014..53359-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig133.14.8 ID=mRNA_P-littoralis_Contig133.14.8|Name=mRNA_P-littoralis_Contig133.14.8|organism=Pylaiella littoralis U1_48|type=mRNA|length=9346bp|location=Sequence derived from alignment at P-littoralis_Contig133:44014..53359- (Pylaiella littoralis U1_48)
ACCGGCAGGATGGCCGAAATTCAATGGGGACCTTGGAGTGGCGTACTTCA AGGAAGCCCCACCGGCTTTCCTGCCGCGTCGACACACTCGGCGTGGAGTC TATCTGCGTCTGACCTCGAGATGCTTCAGAAGGCGAGTCGCATTCTGTAC TCTTTCTCGCACCACGTAGATCTGATTGCTACATCTGTCTGCACACATGT AGGTGCATGTATGTATGAGCGTCCCTTTATAGAGAGTACGCAGTACGCAG CGCGGAGCGCCGACCTCCGTTTACCAGACGCACAGCAGCACTATGATACA CGGCCAGATCGTGAAAGACATGTGCGATAGGTGTGTTCGCGTACAGCGAA CGTCTTCTTCCTGGCCTGGTCATTTCTCGGGTTGTTCCAGCCACAGGAGC CCCACTACTCCGGCAGTACAAGTTGCTCCGCACTCACACACTCACACACG CCCGAGTATTTTCGTATTTTTGCACTCGGAGTATGTATTTTACCCGTGAT TACCGCCGAGGGACGCAGGCATGACGTCACGAACCCAGCCCCCGAAGCGG TGAGTAGACTTTCTTGGGTCAGAAATATGATATTCCCTGCCTTTGCGTGC TTTCACCACATGACATGATACGGTTCGTTCGTGCGCTGTTGTTTCTTCCT GTCTCGATGACGCTGGCGAAGAGAAAGTTACTTCGTGCATTCTAATCTGG GTAGTCCTGCTTTGTAACGACTATTTCGGACCTTTTGCAGGGGAGAGAAA CCGTCGTCATTTCCTTCTTCGCAGCAGGGTAACTACTAACTCCTCTTTTT TGTTTTTGATGTGCAGACGATGCTGTCTATGCTGACGGATTCTGCGCTGA GTGACGTGTGCCTAGTGGTCGAAGGCATCGAAGTGCCCTCCCACAAGGCT GTGCTTGGTGAGCGGCGTGTATGCGTTCGTTGTATCTCCCCTGTTTTTTT GCAAATTTTCCCTGCTCGGATGATGCAAGGCAGCAGGGCAGCCAGTAGTA TCATACCGGTAGTGATATTTCTTCTCGATTGTTCCCTTCACGATATTACA GATATTTTCTGACAACTCAGCTTGCATACATATTTTTATATGTATTTTTC TTACAAACACATCTGATGAGTTATAGAAACACTGGTGTAGATGTATCTCA TTCTTTGTGTTCGTTGCAATACAATATTTACTCCAGACCCTCGTCTGGAG AGAGGCGAACACATTGATGTGTTTGTAAGTTGAAAAAAAAAAACACATCA ATATGTTCGCCTCTCCCCAGACGAGGATCCGGGGTAGAAGAAAAAATAAG CATCATTGGGGCGTCACCACCCCGAAGTACTCCACAAGTAAAACGTCTTC AGAATGCTGCTGTTCCGAATGGACGTCCTGCTCTGTTGTACAGCAATATC GCACTTTCAGAAAGGGACGTTGGAGAGAACTCCAACCTCCTCGCACCCGG CCTTGGGTATCATCGATCGCTATGTTTTTAGCCTCGCTCCGCAGCGAAAA TGCCGTAGTCGATAGTTTTCGCGCACACATTTCTGTTCAATGGTACAAAA AATAGTCAAAAAATATCCGTGCAGCTTTTTTCCTCCGCGAGTGATATTCT TGCTGATCCTTTTGTCATTTACGCCGGTAGAGTGCATCAAACGGTATCTT CTCTCTTTGTCAGCTGACAGCTGATAGAAACGGTGCTTAACATGAATATC CCTCTTCCTGAGCCCCCCTGCCTCCCTTACGTTGCTCGGAGTATTTATTC ACTTCTACTTGGCCGACTTTCTGCCCACACTGCAGCCATGTAGCGGGCGT GTCAACGCCGCACGCTCACAACAGATCGGCACATGCATGGACACATCAGG ACTGCTGTTTCGTGTAATGACGTACCGCTGTATGGTAGGATAATTTGTGT TGTTCCTGCTCCAGCAGCGTTTGTATGATGGGCCAAGACCGCGAAGGAGA CTTACGCCATCTTTCTGTGATGATGCGATCATATCCGCGTGCCTGCCACC AAACTTTCCCGCTGTCCAGCCTGGCCATGATAGAAATATGAAACTGGACA GTCCTCAAACATTCCTGCACTTGGCAAAAAGCACCTCGGTGCCCCAAGTC CCGCTATTTTCTACTGCGAGTAGTTTCTGGTGCCGTGTGCTAAGTTATCC TACGACGTATTTCAGCACATCAGCCTTTGCGAATGCATTTCCCCCCCCAA AATCGTGCGCGCGTGCAACCAAACTCACGCTCGATGTGTCACATCATATC ATACCATCCGACATCATCCGACATTATCCGACAATATTCGACACGACGAC GACCAGCCGCATGGAGCCGGCCGTTCCGAGCGATGTTCACCCTGCCCATG CTGGAATCGCGGCACCAGTGCAGAGTGGTCATCGAGGACGCCGAGCACAA GCACCTGATGGTCGTCCTTCACTACCTGTACGGCGGGTGAGGTTTCCTCT TGCCCTTTGCTCTCCTGCCGTCCGTCGCCCTGGTGTCATGACTGCCTTGT ATGCGTGCTTCGTGGCGAGGGAGAAGGTTCTTGGGGTCCGCTCTTCCCCA CCCCTGTCAAGATCTATCGAGGTGGTTGTGGGTGTTCGAAAGACGTCGAT TGTTTCGAGGGTTCGACCGCAGAGATGCACACACCCTCCTACTCCTGCCC TACCTTCTGCTGCCGCTTCGCCTGCTGTTCTTGTGTGTGTTCGTCTCCTT TTCCGTGTCTACCTTGTTTTTCCACGTGAAAAATGATTTTCACACTGGCC AGGCGCATCGGCCTTAACGATAAGAACGTGATGCCGGTGTCTGCTCTGGC TAATCGGTACGAAGTGCTGCCACTCGTAGCTCAGTGCGAAGGCTTCATGA AGGTAACGAACGCGGGCAGATACTATGGAAAATAATGCCGAGGTTTTGTG AGAGTGTGCTGTCTGCCGTGTGAGATACTTACGTACGTCATCTGGTACCT GTTATGTTCGAAACCTCCGGTGCATTTGCGTTCTGCCGCTGTCGTCGCTT TACCATGGCCGTCGGCGGAATGATTGTTGATTTACAGAAAGCATTTTTCT GTCAACTTTTGTATTGCTGTTGACGTGGTTATCAAAGCCGGCAGCAGTGT CCTTGAGTAGCTCTATGGACGTCGTCCTCGAAACCCAGGGGCCTTCACGA CAAACGAAAGAGTTCGATAGTGCAGCCATGGAGATTTTCAGCACAAGGTT CACGAAGGCGTGGTTCTCAAGGGTGTTCCATCGTCTCGATTTAATTTTCG CCGCAGGGCGTTTTGACCAACGAGGAAACTGCGTGCCACGTTTCTCTTTC GTCAAAGCGAGGGTTCATTGAGACCCTCACGCGTTTGGTTGCACGCTCCC GTTGTTTTGGCCTTTCCTCTGTCGCAGAAGCGCCTCAACCCGAGTAGCGT TTGCCAACAACTCCTGGCTGCTGAGGAGCACCGTGTGCCGAAGGCTGCAG CCTTTGCCTTGGAGTTCCTCGCCGTGCACTTTGATGAGGTAATACGAAGT ATACGGTCTAGCATGCAGCAGTATGGCACCCCCCTCCGCCCAAATATCGT ACAGTACCTAGTACGTGTTGCTTTTATCGCAGTTGGCTCGCCGCTGTGAG TTTCACCTCCTTTGGTGATGAGTTTTCGTTTCTGAAGCTTTGTGCATTCC GTGCTCAGCGAGAGACTTGCAGCGTGCACAGACCACAAGCTGTGAAGAAA GGTGCCGCGAGCGAGCTGGAAGATGATGGAATTCGGACAATTCGACGCAG AAGGGGCGAAAGAGGGGTTGGAAGGCAGGGCGGCGTGTGTCACATCTCCA AGGGACTTGCGCGAGTCGGCCGTTGAGCTGTACACAATGGTTAAATTCGT GATGATGCGCCAATTAACTTGCGCCAATAAACTTGCGCCATGAGAGCATC AAGTCTAGCGGTGCCGCGCGTATCACACCCAACATCCCCGTAATTGGAAG GAGGTCTGGTGACCGATTTGTCGGCGTTTTTTCTGTAGAGGCTTGAAGAT GTGTGTGGGTGACTGAGACACGGAGGAAGAACGAAGGCTCTGTGTTCTTG ACTTTGATCGTGTTGCCTCACTATTCACTTGAGGTCTATGCGTGTGCGCT TCAAAACGCGATGTGACGGCCCCGAATGACGCCACCCACGCGCCAGGGAT TCTGGACCAATCAGAATTCGACGGTCAGCAACTTTGGTAATAGGAAGACT GCATCACTTCAACGTCTTTTCTCTGGGGCGTTTTTTCTTCCCGTACGCAT TGCTGCTGCACCGTCCTACATAGGTCTGCCACGATAGTAGCCGCGACTTC AACTCTCTGGGCGGCGATACAGTGCTGCGTGTGCTCCAGCACAATGGCCT CACTGCGGACGAGGAAACGGTGCGTTCTTGAACCAACGGCTGCTGTGTAC AGCATTACAGCAGTACATACTTGTATTCCCTGAGCAAGTATTTCCCCATC TCGTCTTGTGTTTCCAAGCACAGAAATCGTTGTTTGTTTTGCTCTGGGCT TCGTCTGACGATGAACCCGTTCGCTGTTGTCATTTTTACCTTCACGTTTC TATGAAGATCCCCCCCCCCCCACACCGGTCGTTCGTCACCCCTCTTTCTC GTTGGACGACCTCTACGCGTCGCTTTTCCCGCACGGACACACACACCCGC ATGGGCACACGTCCAACAGGTTTTCCTAGCCGTGGACGGCTGGGCTAAGG GTTGGAGGCACCGACGAGCCATCCGCGGCGCCCGCCCCAACTTCGAGGCC GTTAGGCCTCTGTCGCCGGCCGAAGCCGGACCAGCGACCACGCAGATGCC CGGCGGTGCTAGCACGACGAACCGTGGCCCATCGAGCTCACGCAGCAGTG TCCAGAAAACGCTCAGCGCGGGCGACTTCCCCGCGCCAAAGAAAGCGTGG CAAGACGCGCAGGACACGGATCGGCAGTGTTGTATCGGCACCGGCGGTGG TGGTGGTGCAATGGAACACGATCGGCTTGAACGGACGAAGGGGATCGCAA CCAGGCGCAGCGAAAAGGACGGACCTTCGATGGCACCGTTAGCAGTGGTA GCGACGGCGGCACCAACAGTTTCGGCACCAGCGGTTTCGGCAGCAACAGT GGCGAGGGCAGCGGCGGGGGCAGGGGCGGCAGCGAGGAAGGCGCAACAAG AGCAGCATGCCGTCGGGCAAGGACCTTTGATCGCCGCTGCCTCTGCTGCT GCTGCTAGTACCGCTACTACGACTGCTACTGCTGCTGCTGCTGCTGCTGC TGCTGCAAATGCTAGCACAGACGATACCACCGGTTTGCCGAGCAGCCCAG ACTTTGCATGTTTTACAACTCCAACCCCGACCGCTGCAGCGGGTATCGGC GGCCGAGGCTGTAGCGGAAATGTTGGCCAGCTTTTGACGATGGCTGTGGG CGAGGAAGCCGGGAAAGGAGAAGCGGGGGGTACCGTGCGTGGACTGCCAC AGAGGCGGGCAGGTGGGCCAGCCGAAGGCACGGAAAGAAGAGGAAGGTGC GCACGAAGGGAGCTCGAGCCGGGGGCGTCGTTTCCGCCTTCTCCGCCCCG GCTTCAACGCTCTGTTGAAGACGCGAAGAAGGGTGCTGCTGTTGTCGTTG CCCGTGGAAGCTCTGCTGCGGCCGATGCCGTTGCTGATCCAGGGACAGAG GCCTCGAAGACAGTTGAGGCCTCAGAGGCGGTGACCTCCATGCCGGAGGA GGAGCGAGACTCCGTGGACGGTCTCCTGGAGGAAGTCCGGTTCCCCCTCA TATCGACCAGCTTTTTGTGCCAAGGTACGCTCTGTAGTCAGTTGTCCGTG TTGTGCCTGGTTTTGTTTTGCCCGGGCCCCCCTTGCATCAACCATTTGTT ATTTGTGTGTGTACGTCTGTTACTGAGGGGTTGGTGCCGTACGTGTTTTC CAAGCTGCCTACCGAATGCTGCCTCTGTCGGCAGCGGGCAACACGTAACG CCCGCACGAAGCAACAGGAGAAAACACATGTTCGGTGCTGCTTGCTGGGC GGTGCGAACGAACGTATCCGGCTGCCACATGAGTCCGGAGATGAGCTTAT ATTTCTCATGTCTGTTTGCCCGACCGCAGTGGTCGAAAAGTCCCTGGCAA TGACCGGCAGCCGAGTAGCGCATAAATTGCTGCACGAGGCTTACCGCTTC CAAGCCATGACTTCGGCGGATGCTGTGGACGTAGATGAGCACTTTCCAGG CAACCATCGGGTCAAGGTCAGTGTTTTTTGGTGCGCCTGCTGGCAGTAAA AGCGGGTCTGTCTGGTGTTGTCTGTTTGTGATGGGAGCTATGACACAAAT GATCACCGTTTTCCGACGTAACCCGCTGACGGCTCCTCTATCGCAGCCGG CATTGGCGCCCGCGGGAGTACCAGTCGGACGTGCCCCTCTCTGTCGGAGG AGTTGGCCATCCCAAGCTGCTCACACAGCAATCATCGCGAGTGTTTGCTT GATGTCCCTCACGAATGGCGCGTGCTCCTGTCCCCTCCTTGGAATGTTCG GCGTGGCCGGTGCTATGCATGAAAACGAGCAGTACCGCGGGCACGAGCGA GTCTTGTTCGGAGAAGAAGATGGTTGCGTCGGGACGGTAGACGACTTCAG CTCTTCTCTGTCAGAGGTGTGAACACGGATCACAACGAATACCTCTCTCC TAGCTGCGATGGCAACATTACCAAACGAACACAAGTCACTGCTACATTGC CATCTTTACAGAGTGAAATGCGACTACAGAGGCCGTGTTCGGTGTGGTGA TGGTCATGCACGGGTATGCTAAAATCGAGGATTTTGTTTTTTTCAGCGGT GATGGCGATGAATCAGATACCTCAACACTGCCGGCATGGTGCGCCTCGGT GATGAATGATTGTCCTGGCGGTGATGGCTGTGCGTGTGTCACGTCCGACG ATTCCGTTCGACACGATGCAGGTGCACGTGGTGGACAACGTCAAGCGCAA AGATGAAAAGTACTGGCTGCCTGGGCAACCCGAGGAAGCGTACTTCTGCG TGCGGGTAAGTGTTACGGAGTATACTTTTCATCCCTGTATGATTAGGGTG TTGTTTAGAAGTAACCCCGTACCATGTATCCAGATACCAGGGGATGGCAT GTCGCCATCCCCGTTGTATACCAGCTGTTGGGACTCTTTCGAATCGATGT CGTTCCACTTAATATATGTGTCAAAGAAAAGTCACAATCCTGTTGAGAGA CTCGAATCCCAGTAGCCGATCTTTCCTGACGCACGAACAGGTAGTTGGTA CACGTTGCGACAAAGTGGGGTCGCCTGATTCCTGTTTCTAGTTTGGAGAA ACCGATATCGGACCTGTTCGGATTCGTTCTACTCGCCCATGCACTCAGGT TTGTATTCAGTGCTAAGCACTGCTAACCTTGCATCACGTGCCTTGCATGG GACTGTATGTGAAGTGCAATGGCTGCCGCAGAACGTGCAGCGCTTCCGGG TCAGCGTAGTGCGTTGGATTAGCACAGAGGAATACGCCACAAAAACGAGC ATCGTACAATAGGTCGATTAACCTTCCGCACGACACATTTGCTCTAGTAT TGTGTTTTCGGTTATTGTTACTGTGACCTGGTCTGGTCTGAGTGTTTTGA CAAGTCCGTTTCGGGAATTGATTCCGTCCTTGCCGCTCTCTTGACCCCCC CCCGTCCCTAACGTTCCGCGCCCCCCCCTGAAGTTGGACCGAGTGCGGCG GGTAACAAAGGTTCGCTTCCAAAACCGTTACAGCGAGGAATTCGAGGTTG CCGTGCGTCGCACTTTGAACGAAGAGTGGCAGGTGGGCGGTGTACTGCTG TCCAGTCATGTTCAATTTTGGCTTTTCAACTATTTCCGATAAGATGCTTT GAAGCAGAGACGTCACTGCAGCGCTCTTCTGCTTCGTACACGAAAGCGTG GGTCCTTTGCTCCTCTGCCAGCATACCTACCCAACAGAAGTTCATCACAA GCCTTTTTATATTCAGCACATTCATGCCGGGGTACAGATTTTTTCCATTG CTCCGTACACGCCGGCAGCACTTGCTTCGTTTGGTTCACTTGTCATGCGT CGGTTTTGTTTTCGTTGTGCATGTTTACTCATCGGTCACGGGTAGTGAGA GTCACTTGCCTCTTTTGTAGCTGTCAACAAGGACCAGCAGTCGTAAAGAC CTGGGAGTACGGTTTAGCGTTCCGACGAACCGAGTGTCCGTTCCGACAAG CGTTTTTTTTTTGTCATTTTTGCGAAAAATCGCCACGCCAAGCACGCCGA ACGAAACCCTGTCGGCTCACTGCTAGTAGTACAAGAACGCGTCAGATGTG CTTGTCGTTTAATTCAATGCCTGGTGCGTTTAGTGACACCACATCACATG ACAACCGCAGGTGATCGTGCCGCGCCGGTGCAGCGGGGGACACAAGGACA TCCAGGAGATCAACCTGACTCGAAAGCGGGTCAAAGCTAGGCACGTCAAG ATTTCCCTGAGAGGCCGAAAGAGGTCATGCTACAACACGTCGTGCTACTG GACGGAGCTCCTCGGATTTTGAAGTTTTGTTGAGCTGAGCGAGTTTCGGG CGGTGGTTGTGTGTGTGTGTGTGGGATGTGGAATGTGTGTGTGTTGTCAT CCCTTTAATTGGACGCCACTCTACACCTTTCGGGTAGGTAGCCGCTCCAA CCGGGGTCGCACAGTAGGAAGTCAACATAGGAGTTTTCTTTTATTTAGTT TCTTGTCGTTCTCCACTGCCCACTGCGGTACCTACCTTCCTTTTTTCTCG CGAGAAAGGGTACAGCCATCCCTTTCCCTCGTCGCACTTCGAATTTTGGT TACTCACGAATTAATCGTTTCCACCCTCACGCATGACATGAGAAGAATTC CGGATCGTGTTACTGCGCCGGGATTCGAACTCAAGCGTAAGTGTCAGAAG ATTTCGAGGATAATCAACTGAACCACCGGGGCGACCGGTGGTGTGGGAGA TAGAAATGGGGGCAGTTTTGTGTGAGACTTGTGTATACGCGTTGGAGGGC AAAACGTGCCCCTTCGTTCGCTGAGGCATTCCCTGGGGAGACAACACACC CCGGTTGCTGGGTGAGATTCACCTCTTGTTGTTCGCCAGATGCAGCAGAC GGACGAAATTTCGTTCACGGTTCAAGTTGTGTAGAAAAGTTTCACCCGTT TATGACAAGCATGGTACCGTTGTATTTTAGATTGAAGATCGCACACCTTG CGGCAATTAATGCATGTGACGGGGCCAACCACTGCTCCTGTCAAGTCCAG ACGAGCGAGCTTACCAGGGAGAAGGGTAACGAAGCAGCCTAGTCTCTTGT TGGCTTGCCGCGTTCAGTGAAAGTTATGTAGGTGGTGGGCAGGGGG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig133:44014..53359-

>mRNA_P-littoralis_Contig133.14.8 ID=mRNA_P-littoralis_Contig133.14.8|Name=mRNA_P-littoralis_Contig133.14.8|organism=Pylaiella littoralis U1_48|type=CDS|length=2541bp|location=Sequence derived from alignment at P-littoralis_Contig133:44014..53359- (Pylaiella littoralis U1_48)
ATGGCCGAAATTCAATGGGGACCTTGGAGTGGCGTACTTCAAGGAAGCCC
CACCGGCTTTCCTGCCGCGTCGACACACTCGGCGTGGAGTCTATCTGCGT
CTGACCTCGAGATGCTTCAGAAGGCGAGTCGCATTCTGTACTCTTTCTCG
CACCACACGATGCTGTCTATGCTGACGGATTCTGCGCTGAGTGACGTGTG
CCTAGTGGTCGAAGGCATCGAAGTGCCCTCCCACAAGGCTGTGCTTGCCG
CATGGAGCCGGCCGTTCCGAGCGATGTTCACCCTGCCCATGCTGGAATCG
CGGCACCAGTGCAGAGTGGTCATCGAGGACGCCGAGCACAAGCACCTGAT
GGTCGTCCTTCACTACCTGTACGGCGGGCGCATCGGCCTTAACGATAAGA
ACGTGATGCCGGTGTCTGCTCTGGCTAATCGGTACGAAGTGCTGCCACTC
GTAGCTCAGTGCGAAGGCTTCATGAAGAAGCGCCTCAACCCGAGTAGCGT
TTGCCAACAACTCCTGGCTGCTGAGGAGCACCGTGTGCCGAAGGCTGCAG
CCTTTGCCTTGGAGTTCCTCGCCGTGCACTTTGATGAGGTCTGCCACGAT
AGTAGCCGCGACTTCAACTCTCTGGGCGGCGATACAGTGCTGCGTGTGCT
CCAGCACAATGGCCTCACTGCGGACGAGGAAACGGTTTTCCTAGCCGTGG
ACGGCTGGGCTAAGGGTTGGAGGCACCGACGAGCCATCCGCGGCGCCCGC
CCCAACTTCGAGGCCGTTAGGCCTCTGTCGCCGGCCGAAGCCGGACCAGC
GACCACGCAGATGCCCGGCGGTGCTAGCACGACGAACCGTGGCCCATCGA
GCTCACGCAGCAGTGTCCAGAAAACGCTCAGCGCGGGCGACTTCCCCGCG
CCAAAGAAAGCGTGGCAAGACGCGCAGGACACGGATCGGCAGTGTTGTAT
CGGCACCGGCGGTGGTGGTGGTGCAATGGAACACGATCGGCTTGAACGGA
CGAAGGGGATCGCAACCAGGCGCAGCGAAAAGGACGGACCTTCGATGGCA
CCGTTAGCAGTGGTAGCGACGGCGGCACCAACAGTTTCGGCACCAGCGGT
TTCGGCAGCAACAGTGGCGAGGGCAGCGGCGGGGGCAGGGGCGGCAGCGA
GGAAGGCGCAACAAGAGCAGCATGCCGTCGGGCAAGGACCTTTGATCGCC
GCTGCCTCTGCTGCTGCTGCTAGTACCGCTACTACGACTGCTACTGCTGC
TGCTGCTGCTGCTGCTGCTGCAAATGCTAGCACAGACGATACCACCGGTT
TGCCGAGCAGCCCAGACTTTGCATGTTTTACAACTCCAACCCCGACCGCT
GCAGCGGGTATCGGCGGCCGAGGCTGTAGCGGAAATGTTGGCCAGCTTTT
GACGATGGCTGTGGGCGAGGAAGCCGGGAAAGGAGAAGCGGGGGGTACCG
TGCGTGGACTGCCACAGAGGCGGGCAGGTGGGCCAGCCGAAGGCACGGAA
AGAAGAGGAAGGTGCGCACGAAGGGAGCTCGAGCCGGGGGCGTCGTTTCC
GCCTTCTCCGCCCCGGCTTCAACGCTCTGTTGAAGACGCGAAGAAGGGTG
CTGCTGTTGTCGTTGCCCGTGGAAGCTCTGCTGCGGCCGATGCCGTTGCT
GATCCAGGGACAGAGGCCTCGAAGACAGTTGAGGCCTCAGAGGCGGTGAC
CTCCATGCCGGAGGAGGAGCGAGACTCCGTGGACGGTCTCCTGGAGGAAG
TCCGGTTCCCCCTCATATCGACCAGCTTTTTGTGCCAAGTGGTCGAAAAG
TCCCTGGCAATGACCGGCAGCCGAGTAGCGCATAAATTGCTGCACGAGGC
TTACCGCTTCCAAGCCATGACTTCGGCGGATGCTGTGGACGTAGATGAGC
ACTTTCCAGGCAACCATCGGGTCAAGCCGGCATTGGCGCCCGCGGGAGTA
CCAGTCGGACGTGCCCCTCTCTGTCGGAGGAGTTGGCCATCCCAAGCTGC
TCACACAGCAATCATCGCGAGTGTTTGCTTGATGTCCCTCACGAATGGCG
CGTGCTCCTGTCCCCTCCTTGGAATGTTCGGCGTGGCCGGTGCTATGCAT
GAAAACGAGCAGTACCGCGGGCACGAGCGAGTCTTGTTCGGAGAAGAAGA
TGGTTGCGTCGGGACGGTAGACGACTTCAGCTCTTCTCTGTCAGAGGTGC
ACGTGGTGGACAACGTCAAGCGCAAAGATGAAAAGTACTGGCTGCCTGGG
CAACCCGAGGAAGCGTACTTCTGCGTGCGGTTGGACCGAGTGCGGCGGGT
AACAAAGGTTCGCTTCCAAAACCGTTACAGCGAGGAATTCGAGGTTGCCG
TGCGTCGCACTTTGAACGAAGAGTGGCAGGTGATCGTGCCGCGCCGGTGC
AGCGGGGGACACAAGGACATCCAGGAGATCAACCTGACTCGAAAGCGGGT
CAAAGCTAGGCACGTCAAGATTTCCCTGAGAGGCCGAAAGAGGTCATGCT
ACAACACGTCGTGCTACTGGACGGAGCTCCTCGGATTTTGA
back to top