prot_P-littoralis_Contig1323.6.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1323.6.1
Unique Nameprot_P-littoralis_Contig1323.6.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length81
Homology
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BLAST of mRNA_P-littoralis_Contig1323.6.1 vs. uniprot
Match: A0A6H5JI83_9PHAE (NAD(P)-bd_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI83_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 3.030e-25
Identity = 62/81 (76.54%), Postives = 67/81 (82.72%), Query Frame = 0 
Query:    1 MVKTGVSLLAFVAAAAGPAMVVGFALSPSAMTSGARRRATGSSTRLSMMAAAEGKQRVLVIGGTRFSGLYLTKELHSRGHE 81
            M K GVS+L F+AAA GPAMV GFALSP+AM++GAR     SS R   MAAAEGKQRVLVIGGTRFSGLYLTKELHSRGHE
Sbjct:    2 MAKAGVSMLTFIAAAVGPAMVAGFALSPNAMSTGAR---PSSSLR---MAAAEGKQRVLVIGGTRFSGLYLTKELHSRGHE 76
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BLAST of mRNA_P-littoralis_Contig1323.6.1 vs. uniprot
Match: A0A835Z1X3_9STRA (38 kDa ribosome-associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1X3_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 4.270e-7
Identity = 26/28 (92.86%), Postives = 26/28 (92.86%), Query Frame = 0 
Query:   54 GKQRVLVIGGTRFSGLYLTKELHSRGHE 81
            G QRVLVIGGTRFSGLYL KELHSRGHE
Sbjct:    4 GPQRVLVIGGTRFSGLYLQKELHSRGHE 31
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1323.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JI83_9PHAE3.030e-2576.54NAD(P)-bd_dom domain-containing protein n=2 Tax=Ec... [more]
A0A835Z1X3_9STRA4.270e-792.8638 kDa ribosome-associated protein n=1 Tax=Tribone... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1323contigP-littoralis_Contig1323:18871..19113 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1323.6.1mRNA_P-littoralis_Contig1323.6.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1323 18871..19354 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1323.6.1 ID=prot_P-littoralis_Contig1323.6.1|Name=mRNA_P-littoralis_Contig1323.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=81bp
MVKTGVSLLAFVAAAAGPAMVVGFALSPSAMTSGARRRATGSSTRLSMMA
AAEGKQRVLVIGGTRFSGLYLTKELHSRGHE
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