prot_P-littoralis_Contig1323.7.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1323.7.1
Unique Nameprot_P-littoralis_Contig1323.7.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length337
Homology
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BLAST of mRNA_P-littoralis_Contig1323.7.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.050e-7
Identity = 31/43 (72.09%), Postives = 33/43 (76.74%), Query Frame = 0 
Query:    1 QGTYAEAVPLNKRATEIWMKVLGPEHPTAATALNNRAMLLGKQ 43
            QG YAEA PL  RATEIW + LGPEHP  ATALNNRA LL +Q
Sbjct:  657 QGEYAEAEPLYARATEIWERALGPEHPLVATALNNRAGLLERQ 699
[Close]
BLAST of mRNA_P-littoralis_Contig1323.7.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 3.330e-6
Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 0 
Query:    1 QGTYAEAVPLNKRATEIWMKVLGPEHPTAATA 32
            QG YAEAVPLN+RATEIW+K LGPEHP  ATA
Sbjct: 1064 QGNYAEAVPLNERATEIWIKALGPEHPQVATA 1095
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1323.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KU94_9PHAE1.050e-772.09NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JJK0_9PHAE3.330e-681.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 233..267
e-value: 94.0
score: 6.4
coord: 30..63
e-value: 1.8E-5
score: 34.2
coord: 269..302
e-value: 390.0
score: 1.0
coord: 191..224
e-value: 0.33
score: 20.0
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 30..63
score: 8.6734
NoneNo IPR availablePFAMPF13424TPR_12coord: 1..62
e-value: 2.8E-15
score: 56.4
coord: 163..223
e-value: 2.1E-13
score: 50.3
coord: 283..337
e-value: 1.6E-13
score: 50.7
NoneNo IPR availablePFAMPF13374TPR_10coord: 233..273
e-value: 3.6E-9
score: 36.2
NoneNo IPR availablePANTHERPTHR45783KINESIN LIGHT CHAINcoord: 187..281
coord: 98..217
coord: 283..336
coord: 1..87
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 120..278
e-value: 2.6E-48
score: 166.1
coord: 279..337
e-value: 1.1E-18
score: 69.1
coord: 1..119
e-value: 4.1E-35
score: 122.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 143..266
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..85
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 228..336

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1323contigP-littoralis_Contig1323:23192..26389 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1323.7.1mRNA_P-littoralis_Contig1323.7.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1323 23192..26389 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1323.7.1 ID=prot_P-littoralis_Contig1323.7.1|Name=mRNA_P-littoralis_Contig1323.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=337bp
QGTYAEAVPLNKRATEIWMKVLGPEHPTAATALNNRAMLLGKQGKYEEAE
PLYKRSLAIDEKVYGPDHPAVATDLNNWAGLLKNQVRAIFFLKNFSQAIR
EKVLGPEHPDVAASLNNRGVGKYSEADPLYKRAAAMNEAVFGPERPRVAT
DLNNRADLDHTPGKYDQADPVYSRAINIWEAALGPEHPQVATGLDNRAQL
LESQGKYDDAELLYVRAIAIREKALGPEHPALALSLNNRANLLQIQVRTY
AEAEPLYKRSLAIHEKVYGPDHPKVATDLNDWGKYAEAKPLYKRSLAINE
EVLGPEHPHVASLLNNLAGLLKSQGKYAEAEPLYERS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf