prot_P-littoralis_Contig1320.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1320.4.1
Unique Nameprot_P-littoralis_Contig1320.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length153
Homology
BLAST of mRNA_P-littoralis_Contig1320.4.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 1.210e-45
Identity = 86/154 (55.84%), Postives = 108/154 (70.13%), Query Frame = 0
Query:    1 MAAREKANASISRPSAGVSADRDSLVLVRTPASLRHRDRRGMKLQHDVYTGPWTVVEVLEKGLSVQVEMRGLRPRSRRVSAADVKPFHVRPVHLRHKIGDEFAQYAWGPDFRLPESSDLQPKYQTLVDCRQFATQTG-RLQWEFKGLTPSGTES 153
            +AAR KANASI R SAGV   ++SLVLVR   S RHRD RG KLQHD+YTGPW V  +++ GLSV+V M G + RSRRVS ADVKPFH+R + LRH + +EFAQ+AWGPDF+LP  +       T+ DCR+    +G R  WE+KG + +G  S
Sbjct: 1623 VAARAKANASIDRSSAGVGVMKESLVLVREFESCRHRDHRGRKLQHDLYTGPWKVTGIIQPGLSVEVMMHGRKKRSRRVSTADVKPFHLRELPLRHSLAEEFAQHAWGPDFKLPPGAKESLGLVTIADCRRVQPASGMRTVWEYKGKSGNGVVS 1776          
BLAST of mRNA_P-littoralis_Contig1320.4.1 vs. uniprot
Match: A0A6H5JMP6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP6_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 4.820e-40
Identity = 80/153 (52.29%), Postives = 106/153 (69.28%), Query Frame = 0
Query:    1 MAAREKANASISRPSAGVSADRDSLVLVRTPASLRHRDRRGMKLQHDVYTGPWTVVEVLEKGLSVQVEMRGLRPRSRRVSAADVKPFHVRPVHLRHKIGDEFAQYAWGPDFRLPESSDLQPKYQTLVDCRQFATQTGRLQWEFKGLTPSGTES 153
            +AAR KANA+I R SAGV+  R+SLVLVR   S R+RDRRG +LQHD+YTGP  V +V+  GL V+V + G R R+RRVS ADVKPFH+ P  LR  I DEFA YAWG D +LP  +    ++ ++ DCR+  ++T ++ WE++G   SG  S
Sbjct:  619 VAARAKANATIERSSAGVAVGRNSLVLVRETESRRYRDRRGRELQHDLYTGPSKVTDVIRPGLIVEVSLHGRRKRTRRVSTADVKPFHLSPPSLRLSISDEFAAYAWGADVKLPSGAAELLEFVSIADCRRSRSRT-QVVWEYRGKLGSGAVS 770          
BLAST of mRNA_P-littoralis_Contig1320.4.1 vs. uniprot
Match: A0A6H5J7F8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7F8_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 4.690e-39
Identity = 73/111 (65.77%), Postives = 86/111 (77.48%), Query Frame = 0
Query:    1 MAAREKANASISRPSAGVSADRDSLVLVRTPASLRHRDRRGMKLQHDVYTGPWTVVEVLEKGLSVQVEMRGLRPRSRRVSAADVKPFHVRPVHLRHKIGDEFAQYAWGPDF 111
            +AAR KANA+  + SAGV+  R+SLVL+R   S RHRDRR  KLQHD+YTGPW V +V++ GLSV+V + G R RSRRVS ADVKPFH+RP  LRH I DEFA YAWGPDF
Sbjct: 1292 VAARAKANATFEKSSAGVAVGRNSLVLIRETESRRHRDRRERKLQHDLYTGPWKVTDVIQPGLSVEVSLHGRRKRSRRVSTADVKPFHLRPPSLRHSIADEFATYAWGPDF 1402          
BLAST of mRNA_P-littoralis_Contig1320.4.1 vs. uniprot
Match: A0A6H5KZY5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZY5_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.190e-24
Identity = 58/90 (64.44%), Postives = 67/90 (74.44%), Query Frame = 0
Query:    1 MAAREKANASISRPSAGVSADRDSLVLVRTPASLRHRDRRGMKLQHDVYTGPWTVVEVLEKGLSVQVEMRGLRPRSRRVSAADVKPFHVR 90
            +AAR KANASI R SAGV   +DSLVLV    S RHRD RG +LQHD+YTGPW V  V++ GLSV+V M G + RSRRVS ADV PFH+R
Sbjct: 1606 VAARAKANASIERSSAGVGDVKDSLVLVGESESSRHRDHRGRELQHDLYTGPWKVTGVVQPGLSVEVMMHGRKKRSRRVSTADVNPFHLR 1695          
BLAST of mRNA_P-littoralis_Contig1320.4.1 vs. uniprot
Match: A0A6H5KBF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF4_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 6.970e-19
Identity = 45/71 (63.38%), Postives = 60/71 (84.51%), Query Frame = 0
Query:    1 MAAREKANASISRPSAGVSADRDSLVLVRTPASLRHRDRRGMKLQHDVYTGPWTVVEVLEKGLSVQVEMRG 71
            +AAR K+NA+ISR +A V+ ++ +LV+VR   S RHRD+RG KLQHD+YTGPWTV EVL++GLSVQV+M+G
Sbjct: 1010 VAARAKSNANISRSTASVTVEKGNLVMVREADSSRHRDKRGRKLQHDLYTGPWTVEEVLQRGLSVQVKMQG 1080          
BLAST of mRNA_P-littoralis_Contig1320.4.1 vs. uniprot
Match: A0A6H5JV25_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV25_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 2.150e-18
Identity = 46/71 (64.79%), Postives = 53/71 (74.65%), Query Frame = 0
Query:    1 MAAREKANASISRPSAGVSADRDSLVLVRTPASLRHRDRRGMKLQHDVYTGPWTVVEVLEKGLSVQVEMRG 71
            +AAR KANASI R SAGV   +DSLVLVR   S RHRD RG KLQHD+YTGPW V  +++ GLSV+V M G
Sbjct:  238 VAARAKANASIERSSAGVGVMKDSLVLVRESESSRHRDHRGRKLQHDLYTGPWKVTGIIQPGLSVEVMMHG 308          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1320.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KEH2_9PHAE1.210e-4555.84RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A6H5JMP6_9PHAE4.820e-4052.29Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J7F8_9PHAE4.690e-3965.77Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KZY5_9PHAE1.190e-2464.44Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KBF4_9PHAE6.970e-1963.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV25_9PHAE2.150e-1864.79Integrase catalytic domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1320contigP-littoralis_Contig1320:35095..35553 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1320.4.1mRNA_P-littoralis_Contig1320.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1320 35095..35553 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1320.4.1 ID=prot_P-littoralis_Contig1320.4.1|Name=mRNA_P-littoralis_Contig1320.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=153bp
MAAREKANASISRPSAGVSADRDSLVLVRTPASLRHRDRRGMKLQHDVYT
GPWTVVEVLEKGLSVQVEMRGLRPRSRRVSAADVKPFHVRPVHLRHKIGD
EFAQYAWGPDFRLPESSDLQPKYQTLVDCRQFATQTGRLQWEFKGLTPSG
TES
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