prot_P-littoralis_Contig1320.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1320.3.1
Unique Nameprot_P-littoralis_Contig1320.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length386
Homology
BLAST of mRNA_P-littoralis_Contig1320.3.1 vs. uniprot
Match: A0A6H5J849_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J849_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 6.240e-78
Identity = 155/363 (42.70%), Postives = 219/363 (60.33%), Query Frame = 0
Query:   37 IRKRLVGSLTPPFYGGPSPGTLTESNCAVF-----------LEEKMRSTLRTLESGVAQLEKDELVDGGWSTVPDEHTPRRIEMLSEFVQGHLATRDAMDSDEPLEVWSLTGDVQIKRREQVTCTDYLRLLVREQALTSGSRELAETALDAIVRQPNEAWAAAAARVVKVFRATFANADRPCVSETQFFWRFVTEADMRHLFSRLTDVLMPNPFERNGVSSLLLQHTQRVSESMRKLRLELHDPTGVAMVSRGVETQKLFKEFAGVLSAQSVS--CRQPARKGVSKQVGSDNMFSLQELSELFASKQSLAAFTAGRVAPMVRDTKVAAVAPLGYIHSVVPEPALELSHPRVAAFQNQVASTPG 386
            +RKR+ G    P YGGPS G LT +N AV            L +K+ S L  +ESG  +LE D  VDG + T  DE TPRR+E++S+FVQ +L+    + + + + V+ +TG+V  K   +VT TD+LRL VRE ALT G+ ELA +A  A+   P E W+AAAARV+ VFRAT A+ +RP ++E   FWRF T   +  L+ R+ +VL+PNPF+RNGVS++L +     + S+  LR+E HDP G AM  RGV  +KLF++F GVLSA++ S     P RK + K  G D +F++ E   LFA+  + A      + P V     +A+AP     + VP P +    P+VAA+QN+ A+ PG
Sbjct:    1 MRKRIAGDKPCPVYGGPSSGPLTIANSAVMXXXXXXXXXXMLLDKVMSVLHNVESGKMRLEPDVYVDGRYVTFADEFTPRRVELISDFVQEYLSVSQQIANADHVHVYLITGEVITKPHREVTATDWLRLYVREHALTGGAAELARSAFSALTLTPGEGWSAAAARVLSVFRATRADPERPYMTEQALFWRFATPVALIELYDRVVEVLLPNPFDRNGVSAILHETAYETTSSLGPLRMEWHDPLGEAMARRGVTAEKLFRKFVGVLSARNASYITPPPPRKHL-KVAGPDRLFTMAEARSLFANSGTGAP---SALPPPVLTQPFSALAP-----APVPAPPVA---PQVAAYQNRTATAPG 351          
BLAST of mRNA_P-littoralis_Contig1320.3.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 4.230e-70
Identity = 128/276 (46.38%), Postives = 180/276 (65.22%), Query Frame = 0
Query:   37 IRKRLVGSLTPPFYGGPSPGTLTESNCAVFLEEKMRSTLRTLESGVAQLEKDELVDGGWSTVPDEHTPRRIEMLSEFVQGHLATRDAMDSDEPLEVWSLTGDVQIKRREQVTCTDYLRLLVREQALTSGSRELAETALDAIVRQPNEAWAAAAARVVKVFRATFANADRPCVSETQFFWRFVTEADMRHLFSRLTDVLMPNPFERNGVSSLLLQHTQRVSESMRKLRLELHDPTGVAMVSRGVETQKLFKEFAGVLSAQSVSCRQPARKGVSKQVG 312
            +RKR+ G    P YGGPS G LT +N AV L++K+ S LR +ESG  +LE D  VDG + T  DE TPRR+E++S+ VQ +L+    + + + + V+ +TG+V  K   +VT TD+LRL VRE ALT G+ ELA +A  A+   P E W+AAAARV+ VFRAT A+ +RP ++E   FWRF T   +  L+ R+ +VL+PNPF+RNGVS++L +     + S+  LR+E HDP G AM  RGV  +KLF++F GVLSA++ S   P  +     +G
Sbjct:    1 MRKRIAGDKPCPVYGGPSSGPLTIANSAVMLQDKVMSVLRNVESGKMRLEPDVYVDGRYVTFADEFTPRRVELISDLVQDYLSVSQQIANSDHVHVYLITGEVITKPHREVTATDWLRLYVREHALTGGAAELARSAFSALTLTPGEGWSAAAARVLSVFRATRADPERPYMTEQALFWRFATPVALIELYDRVVEVLLPNPFDRNGVSAILHETAYETTSSLGPLRMEWHDPLGEAMARRGVTAEKLFRKFVGVLSARNASYITPPPRDADASLG 276          
BLAST of mRNA_P-littoralis_Contig1320.3.1 vs. uniprot
Match: A0A6H5KZY5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZY5_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 4.010e-58
Identity = 123/298 (41.28%), Postives = 175/298 (58.72%), Query Frame = 0
Query:    3 RRTSYERRERLAFEGNSSKPPGFSDATSAKGFERIR--KRLVGSLTPPFYGGPSPGTLTESNCAVFLEEKMRSTLRTLESGVAQLEKDELVDGGWSTVPDEHTPRRIEMLSEFVQGHLATRDAMDSDEPLEVWSLTGDVQIKRREQVTCTDYLRLLVREQALTSGSRELAETALDAIVRQPNEAWAAAAARVVKVFRATFANADRPCVSETQFFWRFVTEADMRHLFSRLTDVLMPNPFERNGVSSLLLQHTQRVSESMRKLRLELHDPTGVAMVSRGVETQKLFKEFAGVLSAQSVS 298
            R+ S  R   LA  G     P + +  + +    +R      G    P YGGPS G LT +N AV L++K+ S LR +ESG  +LE D  VDG + TV DE TPRR+E++S+ VQ +      +   + + V+ + G+V  K   +VT TD+LRL VRE ALT  + ELA +A  A+   P + W+AAAAR++ VFRAT A+ +RP ++E   FWRF T   +  L+ R+ +VL+P PF+RNGVS+ L       + S+  LR+E HD    AM  RGV  +K F++F GVLSA++ S
Sbjct:  148 RKQSRRRSHTLAPSGYGGAVPSYEEWPAVRDPRALRWADSGRGDQPCPVYGGPSSGPLTIANSAVMLQDKVMSVLRNVESGKMRLEPDVYVDGRFVTVADEFTPRRVELISDLVQEYSPVSQQIAKTDHVHVYLINGEVITKPHREVTATDWLRLDVREHALTGVAAELACSAFSALTLTPEDGWSAAAARILSVFRATRADPERPYMTEQALFWRFATPVALIELYDRVVEVLLPTPFDRNGVSAKLHGIAYETTSSLGPLRMEWHDLLEEAMARRGVTAEKFFRKFVGVLSARNAS 445          
BLAST of mRNA_P-littoralis_Contig1320.3.1 vs. uniprot
Match: A0A6H5K8L9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8L9_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 1.480e-57
Identity = 135/335 (40.30%), Postives = 191/335 (57.01%), Query Frame = 0
Query:   73 STLRTLESGVAQLEKDELVDGGWSTVPDEHTPRRIEMLSEFVQGHLATRDAMDSDEPLEVWSLTGDVQIKRREQVTCTDYLRLLVREQALTSGSRELAETALDAIVRQPNEAWAAAAARVVKVFRATFANADRPCVSETQFFWRFVTEADMRHLFSRLTDVLMPNPFERNGVSSLLLQHTQRVSESMRKLRLELHDPTGVAMVSRGVETQKLFKEFAGVLSAQS------VSCRQPARKGVSKQVGSDNM----FSLQELSELFAS------KQSLAAFTAGRVAPMVRD-----TKVAAVAPLGYIHSVVPEPALELSHPRVAAFQNQVASTPG 386
            S LRTL+SGV  LE D  ++G W+T PD HT RR E+L++ +  HL T + + S + ++V+ +TG+V    R+ VT T +LRL+VRE ALT G+ E A  AL A++    E+   AAARV+  FRAT  + DRP ++E +FFWR+++   M  LF R+T+VL+PNP +R GV+ LL +    VS +++KLR E H P G  M  RG   + LF+EF  VLSA+S       + R+P R G   ++ + N      S+ E  +LF +        S+    +G  AP+          VAAVAP        PE    ++   VAAFQN  ASTPG
Sbjct:    2 SVLRTLDSGVIALEPDVFLNGYWATQPDVHTGRRRELLTDLLHEHLLTHNQITSADTVQVYRITGEVVDTPRDSVTATHWLRLIVREHALTGGAVEYANAALQAMMLGTPESMPTAAARVLAAFRATLVDPDRPHITEQRFFWRYISAVQMIALFERVTEVLLPNPVDRAGVNGLLHERIHSVSTTLQKLRQESHHPMGDHMSHRGKVAESLFREFVAVLSARSKPYMTPTTPRKPTRAGGQDRLCAANPTPRHLSMPEYRQLFTADGLASYNSSIPLTVSGGSAPLRPPPPTWLNSVAAVAP----PVAAPESPSSVA---VAAFQNHKASTPG 329          
BLAST of mRNA_P-littoralis_Contig1320.3.1 vs. uniprot
Match: A0A6H5JFF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFF6_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 3.200e-55
Identity = 112/247 (45.34%), Postives = 156/247 (63.16%), Query Frame = 0
Query:   50 YGGPSPGTLTESNCAVFLEEKMRSTLRTLESGVAQLEKDELVDGGWSTVPDEHTPRRIEMLSEFVQGHLATRDAMDSDEPLEVWSLTGDVQIKRREQVTCTDYLRLLVREQALTSGSRELAETALDAIVRQPNEAWAAAAARVVKVFRATFANADRPCVSETQFFWRFVTEADMRHLFSRLTDVLMPNPFERNGVSSLLLQHTQRVSESMRKLRLELHDPTGVAMVSRGVETQKLFKEFAGVLSAQS 296
            Y GP PG L+ +N AV L +K+ S LRTL+SGV  LE D   +G  +T PD HT RR E+L++ +  HL T + + S + L+V+ + G V    R+ VT TD+LRL+VRE ALT G+ E A  AL ++V    E+   AAARV+  FRAT  + DRP V+E +FFWR+++   M  LF  +T+VL+PNP +  GV+ LL + T  +S +++KLR E H+P G  M  R    + LF EF  VLSA+S
Sbjct:  148 YAGPGPGELSMNNRAVRLRQKVISVLRTLDSGVIALEPDVFPNGFRATQPDVHTGRRRELLTDLLHEHLLTHNRITSADSLQVYRIAGQVVDTPRDSVTATDWLRLIVREHALTGGAVEYAYAALQSMVLGTPESMPTAAARVLAAFRATLVDPDRPHVTEQRFFWRYISAVQMIALFEGVTEVLLPNPVDGAGVNGLLHERTHSISTTLQKLRQESHNPMGHHMRHRRTVAEGLFHEFVAVLSARS 394          
BLAST of mRNA_P-littoralis_Contig1320.3.1 vs. uniprot
Match: A0A6H5KZ17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ17_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 2.790e-49
Identity = 106/266 (39.85%), Postives = 151/266 (56.77%), Query Frame = 0
Query:   31 AKGFERIRKRLVGSLTPPFYGGPSPGTLTESNCAVFLEEKMRSTLRTLESGVAQLEKDELVDGGWSTVPDEHTPRRIEMLSEFVQGHLATRDAMDSDEPLEVWSLTGDVQIKRREQVTCTDYLRLLVREQALTSGSRELAETALDAIVRQPNEAWAAAAARVVKVFRATFANADRPCVSETQFFWRFVTEADMRHLFSRLTDVLMPNPFERNGVSSLLLQHTQRVSESMRKLRLELHDPTGVAMVSRGVETQKLFKEFAGVLSAQS 296
            +K  ER RKR+   ++ P Y GP PG L+ +NCAV L++K+ S LRTL+SGV  LE D  ++G W+T PD HT RR E+L++ +  HL T + + S + ++V+  TG+V    R+  T TD+LRL+VRE ALT G+ E A  +L A+V    E+   AAAR++                                LF R+T+VL+PNP +R GV+ LL +    VS +++K R E H P G  M  RG   + LF+E   VLSA+S
Sbjct:    2 SKVIERARKRVTDKVSGPVYAGPGPGELSINNCAVRLQQKVMSILRTLDSGVIALEPDVFLNGYWATQPDVHTRRR-ELLTDLLHEHLLTHNQITSADTVQVYRKTGEVVDTPRDSATATDWLRLIVREHALTGGAVEYANASLQAMVLGAPESMPTAAARMIA-------------------------------LFERVTEVLLPNPVDRAGVNGLLHERIHSVSTTLQKWRQESHHPMGDHMSHRGKVAEGLFRESVAVLSARS 235          
BLAST of mRNA_P-littoralis_Contig1320.3.1 vs. uniprot
Match: A0A6H5J7F8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7F8_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 8.070e-34
Identity = 80/190 (42.11%), Postives = 118/190 (62.11%), Query Frame = 0
Query:   67 LEEKMRSTLRTLESGVAQLEKDELVDGGWSTVPDEHTPRRIEMLSEFVQGHLATRDAMDSDEPLEVWSLTGDVQIKRREQVTCTDYLRLLVREQALTSGSRELAETALDAIVRQPNEAWAAAAARVVKVFRATFANADRPCVSETQFFWRFVTEADMRHLFSRLTDVLMPNPFERNGVSSLLLQHTQRVS 256
            L++K+ S LRT++SG+ +LE D  V+G + TV D+ TPRR+E+LS+     ++    + +   + +  L+G+V  K  EQ T TD+LRL VREQAL  G+ ELA  AL A+   P E W++ AA VV  F A  A+ +RP ++E   FW FVT   M  L+     VL+PN F+RNGVS++L + + R +
Sbjct:    2 LQDKVMSVLRTVDSGMMRLEPDVYVNGQYITVADDLTPRRVELLSDLAHEFMSVSQPIANAHTVNIHLLSGEVIAKPHEQATTTDWLRLYVREQALMGGA-ELARAALAAMTLSPGEGWSSRAASVVSAFGAARAHPERPYITEQALFWCFVTPVQMTALYDCEGQVLLPNAFDRNGVSAILHEKSYRTN 190          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1320.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5J849_9PHAE6.240e-7842.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEH2_9PHAE4.230e-7046.38RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A6H5KZY5_9PHAE4.010e-5841.28Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K8L9_9PHAE1.480e-5740.30Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFF6_9PHAE3.200e-5545.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZ17_9PHAE2.790e-4939.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J7F8_9PHAE8.070e-3442.11Integrase catalytic domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 68..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1320contigP-littoralis_Contig1320:29487..30644 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1320.3.1mRNA_P-littoralis_Contig1320.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1320 29487..30645 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1320.3.1 ID=prot_P-littoralis_Contig1320.3.1|Name=mRNA_P-littoralis_Contig1320.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=386bp
AERRTSYERRERLAFEGNSSKPPGFSDATSAKGFERIRKRLVGSLTPPFY
GGPSPGTLTESNCAVFLEEKMRSTLRTLESGVAQLEKDELVDGGWSTVPD
EHTPRRIEMLSEFVQGHLATRDAMDSDEPLEVWSLTGDVQIKRREQVTCT
DYLRLLVREQALTSGSRELAETALDAIVRQPNEAWAAAAARVVKVFRATF
ANADRPCVSETQFFWRFVTEADMRHLFSRLTDVLMPNPFERNGVSSLLLQ
HTQRVSESMRKLRLELHDPTGVAMVSRGVETQKLFKEFAGVLSAQSVSCR
QPARKGVSKQVGSDNMFSLQELSELFASKQSLAAFTAGRVAPMVRDTKVA
AVAPLGYIHSVVPEPALELSHPRVAAFQNQVASTPG
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