mRNA_P-littoralis_Contig132.69.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig132.69.1 vs. uniprot
Match: D7FWB4_ECTSI (Putative ATP-dependent proteinase, possible LON protease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWB4_ECTSI) HSP 1 Score: 458 bits (1178), Expect = 4.120e-154 Identity = 231/255 (90.59%), Postives = 242/255 (94.90%), Query Frame = 2
Query: 527 MPGSVRTELPVFMLDVAACPGGVVPLHIFEMRYRQLFNDIGTKDNRFGMLVTDPTTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKSAPYTVMEVEVGIPDKKPFEGEPSMWGAEEGTKLEDLELEVFSTVNSVVELMNKLAPPATPGENRTLSEWFLRYSPKVKRDEGLEGESAGDDLAQLAKEDERRMKFSFAVAEMIAMESHTKQLLLQSRSTAYRLAAVREILVKAQKELAAKSSLKDTLG 1291
MPGS +TELPVFMLD++ACPGGVVPLHIFEMRYRQ+FNDIGT DNRFGMLVTD TGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLK+ PYTVMEVEVGIPD KP EGEP WGAEEGT+LEDLELEV+ TVNSVV+LMNKLAPPATPGENRTLSEWFLRYSPKVKRDEGL+GESAGDDLA+ AKEDERRMKFS+AVAEMIAMES TKQLLLQSRSTAYRL AVREILVKAQKELAAKSSLKDTLG
Sbjct: 1 MPGSTKTELPVFMLDMSACPGGVVPLHIFEMRYRQMFNDIGTTDNRFGMLVTDAKTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKTNPYTVMEVEVGIPDNKPLEGEPVKWGAEEGTRLEDLELEVYDTVNSVVDLMNKLAPPATPGENRTLSEWFLRYSPKVKRDEGLDGESAGDDLAKQAKEDERRMKFSYAVAEMIAMESRTKQLLLQSRSTAYRLMAVREILVKAQKELAAKSSLKDTLG 255
BLAST of mRNA_P-littoralis_Contig132.69.1 vs. uniprot
Match: A0A836CM26_9STRA (PUA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM26_9STRA) HSP 1 Score: 164 bits (415), Expect = 1.130e-41 Identity = 106/257 (41.25%), Postives = 143/257 (55.64%), Query Frame = 2
Query: 530 PGSVRTELPVFMLDVAACPGGVVPLHIFEMRYRQLFNDIGTKDNRFGMLVTDPTTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKSAPYTVMEVEVGIPDKKPFEGEPSMWGAEEGTKLEDL---ELEVFSTVNSVVELMNKLAPPATPGENRTLSEWFLRYSPKVKRDEGLEGESAGDDLAQLAKEDERRMKFSFAVAEMIAMESHTKQLLLQSRSTAYRLAAVREILVKAQKELAAKSSLKDTLG 1291
PG+ ELP+F L + CP G PLHIFEMRYRQL N+I +DNRFG+++ DP T + G V+E +R LLPDGRQ V+N ERF++L+V + PY V VE+G+ D++P EEG LE + E V+ + VV L NK+ T+SE R +P + +E RR FSFAV EM+ + KQL+LQ+ + RL E+L KAQK LAA+++LKD LG
Sbjct: 69 PGAKTRELPIFPLSLVTCPNGKCPLHIFEMRYRQLMNNIAGQDNRFGIIMFDPNTQQIAGVGTVVEVVERSLLPDGRQLVMNIGRERFKLLRVTQEKPYMVGLVELGLVDEEP----------EEGQLLEGVRGSEARVWGLLQEVVRLSNKVYDKTKV----TVSEDVARAAP-----------AXXXXXXXXQEERARRSAFSFAVTEMLDIPPRAKQLMLQTLNIGERLDYQAELLDKAQKFLAAQATLKDALG 300
BLAST of mRNA_P-littoralis_Contig132.69.1 vs. uniprot
Match: A0A7S2V5P8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P8_9STRA) HSP 1 Score: 129 bits (325), Expect = 3.230e-29 Identity = 99/269 (36.80%), Postives = 138/269 (51.30%), Query Frame = 2
Query: 488 PLETFDESDVEPLMPGSVRTELPVFMLDVAACPGGVVPLHIFEMRYRQLFNDIGTKDNRFGMLVTDPTTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKSAPYTVMEVEVGIPDKKPFEGEPSMWGAEEGTKLEDLELEVFSTVNSVVELMNKLAPPATPGE-NRTLSEWFLRYSPKVKRDEGLEGESAGDDLAQLAKEDERRMK-FSFAVAEMIAMESHTKQLLLQSRSTAYRLAAVREILVKAQKELAAKSSLKDTL 1288
PL T D E G V +LP+F L + A P G PL I+EMRYR++ NDI KD +FGM + D G G +M QR LL DGRQ ++N+ VERFR+L++ + PYT+ VE+ I D G P L +E +V+ + VV L NK+ + ++ L+ RYS D GL E D RR+ FS AV +M+ + KQ++LQ+ +T RL +L +K LAA+S+LKD L
Sbjct: 93 PLSTGDGGSTEAK--GKV-IDLPLFPLGMVAAPFGKCPLQIYEMRYRRMMNDIQKKDEKFGMAMVDNRNGGLMSVGTIMRVTQRSLLEDGRQLIVNEGVERFRILELKQQKPYTIAAVEI-IDDDMDLHGVP----------LASIEEQVWECLQDVVRLSNKMQKTQKSIQMSKPLTYLAPRYS-----DTGLTLEL-----------DRRRITDFSLAVLDMLDIPPLLKQMMLQTTNTYDRLEFQLSLLDPTRKLLAAQSALKDAL 331
BLAST of mRNA_P-littoralis_Contig132.69.1 vs. uniprot
Match: A0A5J4YJ93_PORPP (LON peptidase N-terminal domain and RING finger protein 3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJ93_PORPP) HSP 1 Score: 127 bits (318), Expect = 8.730e-28 Identity = 90/264 (34.09%), Postives = 132/264 (50.00%), Query Frame = 2
Query: 518 EPLMPGSVR-------TELPVFMLDVAACPGGVVPLHIFEMRYRQLFNDIGTKDNRFGMLVTDPTTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKSAPYTVMEVEVGIPDKKPFEGEPSMWGAEEGTKLEDLELEVFSTVNSVVELMNKLAPPATPGENRTLSEWFLRYSPKVKRDEGLEGESAGDDLAQLAKEDERRMKFSFAVAEMIAMESHTKQLLLQSRSTAYRLAAVREILVKAQKELAAKSSLKDTL 1288
E MP SV ELP+F L + P +VPLHIFEMRYR++F I KDN FG+++ D + R + G EC + +L DGR V+NQ +RFR++KVL+ APY VE F+ EP + V+ ++ V+ L NKL L S ++K+ +E G Q K ++ FSF + ++ M + +Q+LLQ+R T RL +E+L AQ++LAA+ S+K L
Sbjct: 103 EKEMPSSVTGLPTGRLVELPLFPLGLVLYPKALVPLHIFEMRYRRMFGQIREKDNMFGIVMYDSSRKRMARVGCSAECQKVQLQDDGRMLVINQGQQRFRIIKVLQEAPYITALVEY-------FQDEPPR------NDIRQAGAGVWQSLQEVLRLSNKLYNKG------------LDVSDELKKLAPVEENMTGSTEEQFKKLED----FSFGIGSILDMPTEEQQILLQTRDTEKRLRKQKELLDAAQQQLAAQISIKSAL 337
BLAST of mRNA_P-littoralis_Contig132.69.1 vs. uniprot
Match: A0A7J7ID69_9RHOD (LON peptidase N-terminal domain and RING finger protein 3 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ID69_9RHOD) HSP 1 Score: 115 bits (287), Expect = 7.050e-24 Identity = 99/301 (32.89%), Postives = 143/301 (47.51%), Query Frame = 2
Query: 449 ESIFDKNSAILD--VPLETFDESDVEPLMPGSVR-TELPVFMLDVAACPGGVVPLHIFEMRYRQLFNDIGTKDNRFGMLVTDPTTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKSAPYTVMEVEVGIPDKKPFEGEPSMWGA------EEGTK---------LEDLELEVFSTVNSVVELMNKLAPPATPGENRT--LSEWFLRYSPKVKRDEGLEGESAGDDLAQLAKEDERRMKFSFAVAEMIAMESHTKQLLLQSRSTAYRLAAVREILVKAQKELAAKSSLKDTLG 1291
ES FD ++ ++ P+E+ EP + G ELP+F L + PG +PLHIFEMRYRQ+F I D RFG+++ D G + E + LPDGR + +RFRVLK K +PY V VE D+ E + A + GT L LE V++ + V+ L NKL NR LS+ + SP+ L + R+ FSFAV+ ++ M +QLLLQ+R TA RL ++L A++ LAA+ ++K+ LG
Sbjct: 99 ESFFDVDTTAIEYFTPIES-----AEPTLAGPENLAELPLFPLPLVLSPGQPIPLHIFEMRYRQMFQRIRDGDGRFGIVMFDKDRNAHATIGTMAEITVYEPLPDGRIMTSSTGRQRFRVLKYTKESPYLVGLVEY-FDDESRVESAEQIAAALKEPLTQSGTSGDNGDAEQSLTTLERRVWTALGDVLRLSNKLY-------NRVVVLSKQVVENSPETXX-------XXXXXLIDPEQNFHRQKMFSFAVSSILDMPVRQQQLLLQTRDTAKRLLKQAQLLEGARQYLAAQVTIKNALG 379
BLAST of mRNA_P-littoralis_Contig132.69.1 vs. uniprot
Match: A0A7S1TD37_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD37_9RHOD) HSP 1 Score: 109 bits (272), Expect = 8.480e-23 Identity = 82/263 (31.18%), Postives = 130/263 (49.43%), Query Frame = 2
Query: 503 DESDVEPLMPGSVRTELPVFMLDVAACPGGVVPLHIFEMRYRQLFNDIGTKDNRFGMLVTDPTTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKSAPYTVMEVEVGIPDKKPFEGEPSMWGAEEGTKLEDLELEVFSTVNSVVELMNKLAPPATPGENRTLSEWFLRYSPKVK-RDEGLEGESAGDDLAQLAKEDERRMKFSFAVAEMIAMESHTKQLLLQSRSTAYRLAAVREILVKAQKELAAKSSLKDTL 1288
DE+ E + G ELP+F L + P G +PLHIFEMRYR +FN I D+RFG+++ D + G V E + + LPDGR + ERFR+L+ K PY + V+ ++ P + +W V+ T+ V+ L NKL ++ +L E +P + D G +S + + ++ FSF VA+++ + +QL+LQ++ST RL + L A++ LAA+ +KD L
Sbjct: 33 DETLNEGGLGGGETFELPLFPLGLVLHPRGNLPLHIFEMRYRLMFNRIWDGDSRFGIVMYDRERDCVARVGCVAEVQRFEPLPDGRILTNSNGKERFRILRYEKKEPYIIATVQAIKDEEDPVDEMVELWHR------------VWETLKDVLRLSNKLYD-----KDMSLGETISSVAPPAEDSDVGSLSDSPQETILKV-------QDFSFCVAQLLDLAIRDQQLMLQTQSTVQRLRKQLKSLNVARQYLAAQVIIKDAL 271
BLAST of mRNA_P-littoralis_Contig132.69.1 vs. uniprot
Match: M2VXC5_GALSU (ATP-dependent Lon protease n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VXC5_GALSU) HSP 1 Score: 108 bits (270), Expect = 2.730e-22 Identity = 81/260 (31.15%), Postives = 128/260 (49.23%), Query Frame = 2
Query: 509 SDVEPLMPGSVRTELPVFMLDVAACPGGVVPLHIFEMRYRQLFNDIGTKDNRFGMLVTDPTTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKSAPYTVMEVEVGIPDKKPFEGEPSMWGAEEGTKLEDLELEVFSTVNSVVELMNKLAPPATPGENRTLSEWFLRYSPKVKRDEGLEGESAGDDLAQLAKEDERRMKFSFAVAEMIAMESHTKQLLLQSRSTAYRLAAVREILVKAQKELAAKSSLKDTL 1288
S+V P LP+F L + P +PLHIFEMRYR LFN I D FG+++ + +YG +ME + + LPDGR +N ERFRV ++K P+ V V + D + + +++ E V++ +N V+ L NKL G+N LSE R +P + +++ R + FS+ V++++ + +QLLLQ++ST R E+L A+K LAA+ ++ D L
Sbjct: 70 SNVTEQEPALGNRVLPLFPLSLVVQPDATIPLHIFEMRYRLLFNRIKEGDKLFGIVLYNKNNDSVARYGCLMELIRFEPLPDGRMLTVNVGKERFRVNHIIKDKPFITASV-VTVED---IDCDDTIFSLGEA---------VWTDLNQVLSLSNKLY-----GKNVCLSEELRRLAPNPE-----------------SRDRHRLIMFSYRVSQVLDIPVQDQQLLLQTQSTKDRFQHQLELLEHARKFLAAQLAINDAL 294
BLAST of mRNA_P-littoralis_Contig132.69.1 vs. uniprot
Match: R7QBJ2_CHOCR (Lon N-terminal domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBJ2_CHOCR) HSP 1 Score: 108 bits (269), Expect = 8.390e-22 Identity = 92/274 (33.58%), Postives = 139/274 (50.73%), Query Frame = 2
Query: 521 PLMPGSVRTELPVFMLDVAACPGGVVPLHIFEMRYRQLFNDIGTKDNRFGMLVTDPTTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKSAPYTVMEVEVGIPDKKPFEGEPSMWGAEEGTKLEDLELEVFSTVNSVVELMNKLAPPATPGENRTLSEWFLRYSPKVKRDEGLEGESAGDDLAQLAKED----ERRMK-FSFAVAEMIAMESHTKQLLLQSRSTAYRLAAVREILVKAQKELAAKSSLKDTLG*EIDVSHV-IPR 1324
PL+P + ELP+F L + PG VPLH+FE+RYR LFN I D+RFG+++ +P + G E + + LPDGR N ERFR+L++++ PYT VE + D+ P E L L +V+ + V+ L NKL + L SP+++R G A + A+ +D RR++ FSFAV +++ M +Q+LLQ R+T RL ++L A++ LAA+ L +D HV +PR
Sbjct: 32 PLLPE--QRELPLFPLRMVLNPGTPVPLHVFELRYRLLFNRIRDTDSRFGIVMYNPDSSSLASIGCAAELTRFEPLPDGRIMTNNIGRERFRILRIIEEKPYTRAVVE-HVYDETPDED------------LSALMEDVWVVLQDVLRLSNKLY------------DKVLDLSPEIRR--LAPGGDADFEGAETRTKDGWPSPRRLEDFSFAVCQVLDMPLEEQQILLQIRNTGKRLRRQNKMLQTARQYLAAQ------LFPVLDARHVGVPR 270
BLAST of mRNA_P-littoralis_Contig132.69.1 vs. uniprot
Match: M1V6S3_CYAM1 (Similar to ATP-dependent proteinase BsgA n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V6S3_CYAM1) HSP 1 Score: 108 bits (270), Expect = 1.110e-21 Identity = 96/295 (32.54%), Postives = 141/295 (47.80%), Query Frame = 2
Query: 452 SIFDKNSAILDVPLETFDESDVEPLMPGSVRTELPVFMLDVAACPGGVVPLHIFEMRYRQLFNDIGTKDNRFGMLVTDPTTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKSAPYTVMEVEVGIPDKKPFEG---------EPSMWGAEEGTK------LEDLELEVFSTVNSVVELMNKLAPPATPGENRTLSEWFLRYSPKVKRDEGLEGESAGDDLAQLAKEDERRMKFSFAVAEMIAMESHTKQLLLQSRSTAYRLAAVREILVKAQKELAAKSSLKDTLG 1291
S F+++S ++ ++ D E + G + ELP+F L + PG +PLHIFEMRYRQ+F I D RFG+++ D G + E + L DGR + ERFRVLK K +PY V VE D+ E EP ++ T L LE V+S + V+ L NKL +LS+ + SP+ S + + R+ FSFAV+ ++ M +QLLLQ+RSTA RL ++L A++ LAA+ ++K LG
Sbjct: 100 SFFEEDSTAIEY-FSPSEKRDTEVPVSGKLA-ELPLFPLPLVLSPGQPIPLHIFEMRYRQMFQRIREGDGRFGIVMYDKDRNAHAAVGTMAEINVYEPLADGRIMTSSIGRERFRVLKYTKDSPYLVALVEY-FDDEVCIESVEQILAALKEPLPQSGDQETSRISKQSLTLLERRVWSALGDVLRLSNKLYNRVV-----SLSKLVVDNSPETVL-------SIPEGHLDPEQNFHRQKLFSFAVSSILDMPVRQQQLLLQTRSTAKRLLKQAQLLEGARQYLAAQVTIKKALG 379
BLAST of mRNA_P-littoralis_Contig132.69.1 vs. uniprot
Match: A0A2V3IHX0_9FLOR (LON peptidase N-terminal domain and RING finger protein 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHX0_9FLOR) HSP 1 Score: 96.7 bits (239), Expect = 4.080e-18 Identity = 80/253 (31.62%), Postives = 118/253 (46.64%), Query Frame = 2
Query: 536 SVRTELPVFMLDVAACPGGVVPLHIFEMRYRQLFNDIGTKDNRFGMLVTDPTTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKSAPYTVMEVEVGIPDKKPFEGEPSMWGAEEGTKLEDLELEVFSTVNSVVELMNKLAPPATPGENRTLSEWFLRYSPKVKR----DEGLEGESAGDDLAQLAKEDERRMKFSFAVAEMIAMESHTKQLLLQSRSTAYRLAAVREILVKAQKELAAKSSLKD 1282
S ELP+F L + P +PLHIFE+RYR LFN + D RFG+++ D T + G E + + LPDGR N RF ++K++ PYT V DK P G L L EV + V+ L NKL + L SP +KR + + + +G + +E FSF+V +++ M +Q+LLQ TA RL ++L A+K LAA+ ++K+
Sbjct: 87 SALVELPLFPLQLVLMPAMNLPLHIFELRYRLLFNRLRDGDARFGIVLYDANTSSLAQVGCSAELTRFEPLPDGRIMTDNVGRRRFEIVKIIDEKPYTRALVRF-FDDKAP------------GGDLSSLVKEVSLALQDVLRLSNKLY------------DKVLDLSPDIKRLAPNGQIPQTDDSGWPSPSMVQE------FSFSVCQVLDMPLKEQQILLQIDDTAARLRRQEKMLDTARKYLAAQVTIKE 308 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig132.69.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig132.69.1 >prot_P-littoralis_Contig132.69.1 ID=prot_P-littoralis_Contig132.69.1|Name=mRNA_P-littoralis_Contig132.69.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=426bp MQPRHGAMRRPRAAVPVLTAMMVLCCSIGQVGKAAAFSTLAARRCTTSSTback to top mRNA from alignment at P-littoralis_Contig132:311709..321693+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig132.69.1 ID=mRNA_P-littoralis_Contig132.69.1|Name=mRNA_P-littoralis_Contig132.69.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9985bp|location=Sequence derived from alignment at P-littoralis_Contig132:311709..321693+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig132:311709..321693+ >mRNA_P-littoralis_Contig132.69.1 ID=mRNA_P-littoralis_Contig132.69.1|Name=mRNA_P-littoralis_Contig132.69.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1278bp|location=Sequence derived from alignment at P-littoralis_Contig132:311709..321693+ (Pylaiella littoralis U1_48)back to top |