prot_P-littoralis_Contig132.60.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig132.60.1
Unique Nameprot_P-littoralis_Contig132.60.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length380
Homology
BLAST of mRNA_P-littoralis_Contig132.60.1 vs. uniprot
Match: D7FZL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZL7_ECTSI)

HSP 1 Score: 414 bits (1064), Expect = 6.570e-141
Identity = 248/379 (65.44%), Postives = 276/379 (72.82%), Query Frame = 0
Query:    1 MDAATETLTLRRQLEKAVLSEDVERMCDVLKSLGSVDVTLAVLQESKVGSTVSKLKKHSNEGVSDSAKALVKKWKRVVESSGAQGGGAAASPAGKSERSKYAPVSAGKGPGLSVKEARSSSGXXXASAGAGKVLRTFDIAGGFSPCGAIWHLDHTTFDTTALFSRAPAMASPAAPLSRQSSTSSSTSELFASVEVDGVLEEDGLPPSRLRMRKKLLDTLLLGSPEDQRLPTAHVAKNVECAMDAKSPYFYKKEDYLGKARQLVFNLKKNDQLRQDVREGAVAPERLVVMTSTELMSKDKKEEMDKASNERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWKFC 379
            MDA+ ET  LRRQLEKAV +EDVER+ DVL SLG V+VTLAVLQESKVG+TVSKLKKH++E VS SAKALVKKWKRV E+SG QG                 P SAGKG G S +E  S SGXXX                      A   L      T      A +  S A PLSRQ+S  SSTSEL  ++EVD +L +D   P RL+MR+K+ DTLLLGS ED+R+PTA VAK VECAM+  +PY  KK  YL KARQLVFNLKKNDQLRQDVREG V P+RLV MTSTELM+KDK+E MDKA +ERTEARMLDWYDKN+DKINKQCGIKET+GMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWKFC
Sbjct:    1 MDASAETAVLRRQLEKAVSAEDVERIADVLGSLGKVEVTLAVLQESKVGATVSKLKKHADEEVSKSAKALVKKWKRVAEASGVQGXXXXXXXXXXXXXXSP-PGSAGKGSGASKQEVPSPSGXXXXXXXXXXXXXXXXXXXXXXATAATSPLKGAVGKT------ATSSTSEAVPLSRQTS-GSSTSELCTTLEVDSILSDDEPAPLRLKMRRKMFDTLLLGSSEDERIPTARVAKGVECAMNENNPYLSKKASYLDKARQLVFNLKKNDQLRQDVREGLVEPQRLVAMTSTELMAKDKREAMDKAVSERTEARMLDWYDKNEDKINKQCGIKETDGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWKFC 371          
BLAST of mRNA_P-littoralis_Contig132.60.1 vs. uniprot
Match: A0A836CH25_9STRA (Transcription factor S-II-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH25_9STRA)

HSP 1 Score: 213 bits (542), Expect = 2.040e-62
Identity = 151/381 (39.63%), Postives = 207/381 (54.33%), Query Frame = 0
Query:    3 AATETLTLRRQLEKAVLSEDVERMCDVLKSLGSVDVTLAVLQESKVGSTVSKLKKHSNEGVSDSAKALVKKWKRVVESSGAQGGGAAASPAGKSERSKYAPVSAGKGPGLSVKEARSSSGXXXASAGAGKVLRTFDIAGGFSPCGAIWHLDHTTFDTTALFSRAPAMASPAAPLSRQSSTSSSTSELFASVEVDGVLEEDGLPPSRLRMRKKLLDTLLLGSPEDQRLPTAHVAKNVECAMD----AKSPYFYKKEDYLGKARQLVFNLKKNDQLRQDVREGAVAPERLVVMTSTELMSKDKKEEMDKASNERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWKFC 379
            AA E   LR  +EKAV   D  R+CD+L  L  VD+T+ ++ ESK+GS VSKL+KH++  V+  AKALVK WK++ +++G +G   A     +                           XXX SA A + LR        +P       D     T +  S A      A P   Q+  ++ ++   AS      L+EDGL P+RL+MR+K L+  +L   ++   P   +A    C ++    AK P+           RQL+FNLKKN  LR DV  GAV    L+ M+ TE++S  K++ M+  + +  +AR +DW +KNQD+INKQCGI   EGMFECGRCKS KT Y QKQTRSADEPMTTFVTC +C  +W+FC
Sbjct:    5 AAREVAELRDAMEKAVTKADAPRVCDILSQLEKVDMTVDIMAESKIGSAVSKLRKHADSRVAGQAKALVKVWKQLAQAAGVEGSNRA-----QEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASAEQKLRVQ------APVEKALK-DLRRGSTDSFVSDASPRVGGAKPAKAQTPKATVSAAHMAS------LQEDGLLPNRLKMRQKFLEIFVLPEDDESAAPDGQLAAEAACGVERELNAKFPF----------VRQLLFNLKKNAALRSDVVHGAVPCGALIAMSPTEMLSAAKRQAMEAQAQDLVDARRMDWAEKNQDEINKQCGITNMEGMFECGRCKSKKTHYYQKQTRSADEPMTTFVTCLHCGKKWRFC 357          
BLAST of mRNA_P-littoralis_Contig132.60.1 vs. uniprot
Match: A0A7S2XYD9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYD9_9STRA)

HSP 1 Score: 177 bits (448), Expect = 8.700e-49
Identity = 135/382 (35.34%), Postives = 189/382 (49.48%), Query Frame = 0
Query:    3 AATETLTLRRQLEKAVLSED-----VERMCDVLKSLGSVDVTLAVLQESKVGSTVSKLKKHSNEGVSDSAKALVKKWKRVVESSGAQGGGAAASPAGKSERSKYAPVSAGKGPGLSVKEARSSSGXXXASAGAGKVLRTFDIAGGFSPCGAIWHLDHTTFDTTALFSRAPAMASPAAPLSRQSSTSSSTSELFASVEVDGVLEEDGLPPSRLRMRKKLLDTLLLGSPEDQRLPTAHVAKNVECAMDAKSPYFYKKEDYLGKARQLVFNLKKNDQLRQDVREGAVAPERLVVMTSTELMSKDKKEEMDKASNERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWKFC 379
            +A   L  + +LEKA+  E       ER+ D++  L  V VT+  L+++KVG T+ KL+KHS++ V+ +AK L+KKWKR+ E     G  AA +PA        AP       G S +   S+                    GG          D    D                   +++       +L        V  E+GL P RL++R+++  T+     +      A  A+ VE A+     +  K ++Y  K RQL FNLKKN +LR DV  G++AP+ LV ++S EL + D + E  +   +   A   DW   N  K+N  CGIK+ EG+F+C RCKS KTT+TQKQTRSADEPMT FVTC NC NRWKFC
Sbjct:    5 SAETVLPFKDKLEKAIAKESNGESKAERIIDLIGRLNEVPVTVDDLRDTKVGLTIGKLRKHSDQSVAGAAKKLLKKWKRMAEGE-MTGEAAANTPA-------PAPSPPAASNGASEEGVASN--------------------GGXXXXXXXXXXDXXXXDK------------------KKADDEGGVPDL--------VQGEEGLVPQRLKVRERMF-TIFTQDVDASVQKGAAAAREVEAAIHEIFNFSQKTKEYSAKVRQLNFNLKKNSKLRADVVNGSLAPDLLVQLSSDELATDDLRNERARIREDAINASRSDWDAANDQKLNAMCGIKQMEGLFQCFRCKSKKTTHTQKQTRSADEPMTVFVTCLNCGNRWKFC 331          
BLAST of mRNA_P-littoralis_Contig132.60.1 vs. uniprot
Match: K3WZ99_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZ99_GLOUD)

HSP 1 Score: 166 bits (421), Expect = 7.030e-45
Identity = 130/364 (35.71%), Postives = 180/364 (49.45%), Query Frame = 0
Query:   20 SEDVERMCDVLKSLGSVDVTLAVLQESKVGSTVSKLKKHSNEGVSDSAKALVKKWKRVVESSGAQGGGAAASPAGKSERSKYAPVSAGKGPGLSVKEARSSSGXXXASAGAGKVLRTFDIAGGFSPCGAIWHLDHTTFDTTALFSRAPAMASPAAPLSRQSSTSSSTSELFASVEVDGVLEEDGLPPSRLRMRKKLLDTLLL---GSPEDQRLPTAHVAKNVECAMDAKSPYFY---KKEDYLGKARQLVFNLKKNDQLRQDVREGAVAPERLVVMTSTELMSKDKKEEMDKASNERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWK 377
            S D   + DVL++L    +T  +L+E+K+G TV K++KH NE +++ AK LVK WK +  S       A AS +  +   K +  S+  G  +  K   S+S                  + G  P  A               SR P +  PA                             GL   R  +R KL + L     G PE+       +A  +E +M       Y    K+DY  K RQL FNLKKN  LR+D+ + AV+ E+L+ M++ EL +++K+ E+ K  ++  +   LDW D N+DKINKQCGI+  +G+F CGRCKSTKT+ TQKQTRSADEPMT FV C NC NRWK
Sbjct:   19 STDAGEVLDVLRTLEKTTITYGILKETKLGHTVGKMRKHENEKIANQAKLLVKSWKSMALSPKP----ATASSSTPTLERKSSGTSSFDGDRIPKKSVNSTS----------------SSSNGAKPAAATPXXXXXXXXXXXXASRGPFI--PA-----------------------------GLDKVRATVRTKLKEILQATEGGDPEE-------IATAIEVSMARMFNMGYPGENKKDYTAKFRQLSFNLKKNTPLREDLLQDAVSAEQLINMSADELATEEKRNEILKLRDDAFQRARLDWADANEDKINKQCGIENAKGLFTCGRCKSTKTSNTQKQTRSADEPMTVFVQCHNCGNRWK 324          
BLAST of mRNA_P-littoralis_Contig132.60.1 vs. uniprot
Match: A0A5D6XF33_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XF33_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.840e-44
Identity = 132/380 (34.74%), Postives = 180/380 (47.37%), Query Frame = 0
Query:    6 ETLTLRRQLEKAVLSE--DVERMCDVLKSLGSVDVTLAVLQESKVGSTVSKLKKHSNEGVSDSAKALVKKWKRVVESSGAQGGGAAASPAGKSERSKYAPVSAGKGPGLSVKEARSSSGXXXASAGAGKVLRTFDIAGGFSPCGAIWHLDHTTFDTTALFSRAPAMASPAAPLSRQSSTSSSTSELFASVEVDGVLEEDGLPPSRLRMRKKLLDTLLL---GSPEDQRLPTAHVAKNVECAMDAKSPYFY---KKEDYLGKARQLVFNLKKNDQLRQDVREGAVAPERLVVMTSTELMSKDKKEEMDKASNERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWK 377
            E   L R+L K    E  D     DVL+ L +  +T A+L+E+K+G TV K++KH+NE +++ AK LVK WK +                                  LS K + S      AS G  ++ +         P                   +       AAP  R  S               G     G    R  +R KL +TL +   GS ED        A  +E AM       Y    K++Y  K RQL FNLKKN  LR+D+ + AV+ E+L+ M++ EL +++K+ E+ K  ++  +   LDW D N+DKINKQCGI+  +G+F CGRCKS+KT+ TQKQTRSADEPMT FV C NC NRWK
Sbjct:    3 EAQELHRRLLKFNRGETSDESATLDVLRKLETSTITYAILKETKLGHTVGKMRKHANEKLANQAKVLVKSWKNMA---------------------------------LSPKPSAS------ASEGGERIPKKSSSVSSTPPAXXXXXXXXXXXXXXXXXVKPQPQPVVAAPAPRARSK--------------GPFIPPGFDKMRATVRTKLKETLAVSDGGSAED-------TAVAIEVAMARMFNMGYPGENKKEYTAKFRQLSFNLKKNAPLREDLLQDAVSAEQLIAMSADELATEEKRLEVQKLRDDAFQKARLDWADANEDKINKQCGIENAKGLFTCGRCKSSKTSNTQKQTRSADEPMTVFVQCHNCGNRWK 322          
BLAST of mRNA_P-littoralis_Contig132.60.1 vs. uniprot
Match: W4G1Y0_9STRA (Transcription elongation factor S-II n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1Y0_9STRA)

HSP 1 Score: 161 bits (408), Expect = 9.240e-43
Identity = 127/383 (33.16%), Postives = 197/383 (51.44%), Query Frame = 0
Query:    6 ETLTLRRQLEKAVLSEDVER--MCDVLKSLGSVDVTLAVLQESKVGSTVSKLKKHSNEGVSDSAKALVKKWKRVVESSGAQGGGAAASPAGKSERS--KYAPVSAGKGPGLSVKEARSSSGXXXASAGAGKVLRTFDIAGGFSPCGAIWHLDHTTFDTTALFSRAPAMASPAA-PLSRQSSTSSSTSELFASVEVDGVLEEDGLPPSRLRMRKKLLDTLLLGSPEDQRLPTAHVAKNVECAM------DAKSPYFYKKEDYLGKARQLVFNLKKNDQLRQDVREGAVAPERLVVMTSTELMSKDKKEEMDKASNERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWK 377
            + + L ++L K +  ED ++  + D ++ L +VD+TLA+L+++K+G T++KL+KH  E VS  AK L+KKWK +   S          P  KSE    K +P ++     LS K+                                 W +   T        + P    PAA P++ + +   + S    S   + + +  GL   R  +R+KL + L +    +       VA  +E AM      D+       K+ Y  K RQ+ FNLKKN+ LRQ++    ++ ++L+ M+  E+ ++++++EMD+  ++  +   LDW + N DKINK CGIK+T G+F CGRCKSTKT+ TQ+QTRSADEPMT FV C NC  RWK
Sbjct:    3 DVVNLHKRLTKFLAGEDNDQNGVADAMEHLNTVDMTLAILKDTKIGQTIAKLRKHDAEVVSSKAKHLLKKWKTLA--SRPSDSDIKVDPDVKSEMGTPKVSPTASD----LSAKDESK------------------------------WSVKVETIKDEP---KRPVKDDPAATPITIRRAPVHAFSSQRNSTPFEFIPK--GLQDVRATVRRKLKEVLSVAETPELVAEAEFVAVGIEVAMAREFKMDSARNTNEGKKHYTDKYRQVSFNLKKNESLRQNLLTHHISGDQLIKMSPDEMATEERRKEMDQLRDDAFQRARLDWAEANADKINKACGIKDTRGLFTCGRCKSTKTSNTQQQTRSADEPMTVFVICHNCGKRWK 344          
BLAST of mRNA_P-littoralis_Contig132.60.1 vs. uniprot
Match: A0A485KR39_9STRA (Aste57867_10364 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KR39_9STRA)

HSP 1 Score: 156 bits (395), Expect = 4.020e-41
Identity = 129/383 (33.68%), Postives = 182/383 (47.52%), Query Frame = 0
Query:    6 ETLTLRRQLEKAVLSEDVER--MCDVLKSLGSVDVTLAVLQESKVGSTVSKLKKHSNEGVSDSAKALVKKWKRVVESSGAQGGGAAASPAGKSERSKYAPVSAGKGPGLSVKEARSSSGXXXASAGAGKVLRTFDIAGGFSPCGAIWHLDHTTFDTTALFSRAPAMASP---AAPLSRQSSTSSSTSELFASVEVDGVLEEDGLPPSRLRMRKKLLDTLLLGSPEDQRLPTAHVAKNVECAM------DAKSPYFYKKEDYLGKARQLVFNLKKNDQLRQDVREGAVAPERLVVMTSTELMSKDKKEEMDKASNERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWK 377
            + + L ++L K +  ED ++  + D +  L  +++TL +L+++K+G TV+KL+KH  E V+  AK L+KKWK +                                        R S         A   + T                       T   S  P +A P   AAPL            +F S          GL   R+ +RKKL + L L   E+ R  +  VA  +E AM      D+       K++Y  K RQL FNLKKN  LRQD+   AV  ++L+ M+  EL ++++K+EMD+  +   +   LDW + N DKINK CGIK+T G+F CGRCKSTKT+ TQ+QTRSADEPMT FV C +C  RWK
Sbjct:    3 DVVRLHKRLTKFLGGEDNDQNAVADAMDHLDKIEMTLNILKDTKIGQTVAKLRKHDAELVASKAKNLLKKWKTLAS--------------------------------------RPSDSDIKVDTDAKSDVGT----------------PRPKVSPTTSESSEPQVAKPRPAAAPL-----------PVFKSQHAYFEFLPKGLADVRVTVRKKLKEVLNLAE-EELRSESEFVAVEIEVAMAREYKMDSARSMNEGKKNYTDKYRQLSFNLKKNAGLRQDLLCHAVTGDQLIKMSPDELATEERKKEMDQLRDFAFQRARLDWAEANADKINKACGIKDTRGLFTCGRCKSTKTSNTQQQTRSADEPMTVFVICHDCGKRWK 319          
BLAST of mRNA_P-littoralis_Contig132.60.1 vs. uniprot
Match: A0A6A5AKX6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AKX6_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.580e-40
Identity = 126/379 (33.25%), Postives = 187/379 (49.34%), Query Frame = 0
Query:    6 ETLTLRRQLEKAVLSEDVER--MCDVLKSLGSVDVTLAVLQESKVGSTVSKLKKHSNEGVSDSAKALVKKWKRVVESSGAQGGGAAASPAGKSERS--KYAPVSAGKGPGLSVKEARSSSGXXXASAGAGKVLRTFDIAGGFSPCGAIWHLDHTTFDTTALFSRAPAMASPAAPLSRQSSTSSSTSELFASVEVDGVLEEDGLPPSRLRMRKKLLDTLLLGSPEDQRLPTA---HVAKNVECAMDAKSPYFYKKEDYLGKARQLVFNLKKNDQLRQDVREGAVAPERLVVMTSTELMSKDKKEEMDKASNERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWK 377
            + + L ++L K +  ED ++  + D ++ L +VD+TLA+L+++K+G T++KL+KH  E VS  AK L+KKWK +   S          P  KSE    K +P ++     LS K+  +                      G S C    H  H            PA  SP                +F   ++D V     + P  +  R +       G         A    VA   E  MD+       K+ Y  K RQ+ FNLKKN+ LRQ++    ++ ++L+ M+  E+ ++++++EMD+  ++  +   LDW + N DKINK CGIK+T G+F CGRCKSTKT+ TQ+QTRSADEPMT FV C NC  RWK
Sbjct:    3 DVVNLHKRLTKFLAGEDNDQNGVADAMEHLNTVDMTLAILKDTKIGQTIAKLRKHEAEVVSSKAKHLLKKWKTLA--SRPSDSDIKVDPDVKSEMGTPKVSPTASD----LSAKDESNE---------------------GRSGC----HPHHN-----------PARTSP---------------RVFEPAQLDAVR----VHPEGIAGRARHRAPKAQGGXXXXXXXVAVGIEVAMAREFKMDSARNTNEGKKHYTDKYRQVSFNLKKNESLRQNLLTHHISGDQLIKMSPDEMATEERRKEMDQLRDDAFQRARLDWAEANADKINKACGIKDTRGLFTCGRCKSTKTSNTQQQTRSADEPMTVFVICHNCGKRWK 320          
BLAST of mRNA_P-littoralis_Contig132.60.1 vs. uniprot
Match: A0A7S2MN26_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MN26_9STRA)

HSP 1 Score: 155 bits (392), Expect = 2.240e-40
Identity = 136/380 (35.79%), Postives = 187/380 (49.21%), Query Frame = 0
Query:   10 LRRQLEKAVLSEDVERMCDVLKSLGSVDVTLAVLQESKVGSTVSKLKKHSNEGVSDSAKALVKKWKRVVESSGAQGGGAAASPAGKSERSKYAPVSAGKGPGLSVKEARSSSGXXXASAGAGKVLRTFDIAGGFSPCGAIWHLDHTTFDTTALFSRAPAMASPAAPLSRQSSTSSSTSELFASVEVDGVLEEDGLPPSRLRMRKKLLD-------TLLLGSPEDQRLPTAHVAKNVECAMDAKSPYFYK--KEDYLGKARQLVFNLKKNDQLRQDVREGAVAPERLVVMTSTELMSKDKKEEMDKASNERTEARMLDWYDKNQDKINKQCGIKET---EGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWK 377
            L+  L KA  S+D ER  D+L+ L  + +TL +L  + +G+ VSKLK H +  V+  AKALVKKWK++ +  G  GGGA+ S    S +S+  P         S+K++ S   XXX               G  +P GA                       P AP                        E D LPP R  +  KL +       ++L  +PE +    A V+     A++     F K  K  Y  KAR L FNLKKN  LR+++  G     +LV M+  +L + +K +  ++A++   ++R+LDW  KN+ KIN+ CGIK       +F CGRCKSTKTT TQKQTRSADEPMT FV C+NC NRWK
Sbjct:   39 LKENLSKA--SDDKERCMDILQRLEELPMTLQLLSATLIGTVVSKLKSHKDGAVASKAKALVKKWKKLAKEGGV-GGGASVS----SNKSEKRP---------SLKKSLSXXXXXX-------XXXXKSTTGSGAPAGA-----------------------PEAPK-----------------------EWDKLPPLRKNICTKLHNIFMTSPASVLDSAPELKDQSLAAVSAQRAAAVELAIQNFSKGAKASYTDKARTLFFNLKKNAPLRENILLGHTTAAQLVAMSPEQLATNEKAKARNEAASALNDSRLLDWEQKNESKINEMCGIKGELLKASLFTCGRCKSTKTTSTQKQTRSADEPMTVFVFCTNCGNRWK 349          
BLAST of mRNA_P-littoralis_Contig132.60.1 vs. uniprot
Match: A0A024TW44_9STRA (Transcription elongation factor S-II n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TW44_9STRA)

HSP 1 Score: 154 bits (389), Expect = 4.130e-40
Identity = 130/380 (34.21%), Postives = 183/380 (48.16%), Query Frame = 0
Query:    6 ETLTLRRQLEKAVLSEDVER--MCDVLKSLGSVDVTLAVLQESKVGSTVSKLKKHSNEGVSDSAKALVKKWKRVVESSGAQGGGAAASPAGKSERSKYAPVSAGKGPGLSVKEARSSSGXXXASAGAGKVLRTFDIAGGFSPCGAIWHLDHTTFDTTALFSRAPAMASPAAPLSRQSSTSSSTSELFASVEVDGVLEEDGLPPSRLRMRKKLLDTLLLGSPEDQRLPTAHVAKNVECAM------DAKSPYFYKKEDYLGKARQLVFNLKKNDQLRQDVREGAVAPERLVVMTSTELMSKDKKEEMDKASNERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWK 377
            + + L ++L K +  +D ++  + D +  L  VD+TLA+L+++K+G T++KL+KH  E VS  AK L+KKWK +   S            GKSE     P                            KV  T   + G     A W     T    A+  R P+M + A      S   S+  E              GL   R  +R+KL + L L    D       VA  +E AM      D+       K+ Y  K RQL FNLKKN  LR ++    V  ++L+ MT  E+ + ++++EMD+  ++  +   LDW + N DKINK CGIK+  G+F CGRCKSTKT+ TQ+QTRSADEPMT FV C +C  RWK
Sbjct:    3 DVVNLHKRLTKFLAGDDNDQNGVADAMDHLNKVDMTLAILKDTKIGQTIAKLRKHDAELVSSKAKILLKKWKTLA--SRPSDSDIKVEADGKSEPGTPGP----------------------------KVSPT--TSDGSLKDEAKWPEKDET--APAITIRRPSMHALA------SQRGSTPFEFIPK----------GLQDVRATVRRKLKEVLCLAEAPDLVGEAELVAVAIEVAMAREYNMDSARNTNEGKKHYTDKYRQLSFNLKKNVNLRLNLLTNKVTGDQLIKMTPDEMATDERRKEMDQLRDDAFQRARLDWAEANADKINKACGIKDARGLFTCGRCKSTKTSNTQQQTRSADEPMTVFVICHDCGKRWK 332          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig132.60.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZL7_ECTSI6.570e-14165.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CH25_9STRA2.040e-6239.63Transcription factor S-II-domain-containing protei... [more]
A0A7S2XYD9_9STRA8.700e-4935.34Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3WZ99_GLOUD7.030e-4535.71Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XF33_9STRA1.840e-4434.74Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
W4G1Y0_9STRA9.240e-4333.16Transcription elongation factor S-II n=3 Tax=Aphan... [more]
A0A485KR39_9STRA4.020e-4133.68Aste57867_10364 protein n=1 Tax=Aphanomyces stella... [more]
A0A6A5AKX6_9STRA1.580e-4033.25Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A7S2MN26_9STRA2.240e-4035.79Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A024TW44_9STRA4.130e-4034.21Transcription elongation factor S-II n=1 Tax=Aphan... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 296..316
NoneNo IPR availableGENE3D2.20.25.10coord: 332..379
e-value: 9.3E-21
score: 75.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..107
NoneNo IPR availablePANTHERPTHR11477TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEINcoord: 232..379
coord: 20..88
NoneNo IPR availablePANTHERPTHR11477:SF36TRANSCRIPTION ELONGATION FACTOR TFIIScoord: 232..379
coord: 20..88
NoneNo IPR availableCDDcd13749Zn-ribbon_TFIIScoord: 333..378
e-value: 1.65327E-16
score: 70.7126
NoneNo IPR availableCDDcd00183TFIIS_Icoord: 6..79
e-value: 8.96205E-15
score: 66.9482
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 338..377
IPR003617Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-typeSMARTSM00509TFS2_5coord: 7..80
e-value: 1.0E-13
score: 61.5
IPR001222Zinc finger, TFIIS-typeSMARTSM00440Cys4_2coord: 339..378
e-value: 5.3E-18
score: 75.8
IPR001222Zinc finger, TFIIS-typePFAMPF01096TFIIS_Ccoord: 339..377
e-value: 5.6E-18
score: 64.5
IPR001222Zinc finger, TFIIS-typePROSITEPS51133ZF_TFIIS_2coord: 337..377
score: 13.920856
IPR003618Transcription elongation factor S-II, central domainSMARTSM00510mid_6coord: 205..305
e-value: 0.0099
score: 13.4
IPR003618Transcription elongation factor S-II, central domainPFAMPF07500TFIIS_Mcoord: 208..311
e-value: 4.9E-16
score: 59.2
IPR003618Transcription elongation factor S-II, central domainPROSITEPS51321TFIIS_CENTRALcoord: 207..322
score: 16.113909
IPR035100Transcription elongation factor, IIS-typePIRSFPIRSF006704TFIIScoord: 1..379
e-value: 6.9E-62
score: 207.6
IPR036575Transcription elongation factor S-II, central domain superfamilyGENE3D1.10.472.30coord: 192..297
e-value: 3.9E-13
score: 51.6
IPR036575Transcription elongation factor S-II, central domain superfamilySUPERFAMILY46942Elongation factor TFIIS domain 2coord: 206..298
IPR035441TFIIS/LEDGF domain superfamilyGENE3D1.20.930.10Conserved domain common to transcription factors TFIIS, elongin A, CRSP70coord: 1..89
e-value: 3.0E-21
score: 77.0
IPR035441TFIIS/LEDGF domain superfamilySUPERFAMILY47676Conserved domain common to transcription factors TFIIS, elongin A, CRSP70coord: 5..87
IPR017923Transcription factor IIS, N-terminalPFAMPF08711Med26coord: 29..78
e-value: 4.2E-10
score: 39.5
IPR017923Transcription factor IIS, N-terminalPROSITEPS51319TFIIS_Ncoord: 1..81
score: 18.66783

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig132contigP-littoralis_Contig132:255488..262794 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig132.60.1mRNA_P-littoralis_Contig132.60.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig132 254330..262814 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig132.60.1 ID=prot_P-littoralis_Contig132.60.1|Name=mRNA_P-littoralis_Contig132.60.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=380bp
MDAATETLTLRRQLEKAVLSEDVERMCDVLKSLGSVDVTLAVLQESKVGS
TVSKLKKHSNEGVSDSAKALVKKWKRVVESSGAQGGGAAASPAGKSERSK
YAPVSAGKGPGLSVKEARSSSGSGGASAGAGKVLRTFDIAGGFSPCGAIW
HLDHTTFDTTALFSRAPAMASPAAPLSRQSSTSSSTSELFASVEVDGVLE
EDGLPPSRLRMRKKLLDTLLLGSPEDQRLPTAHVAKNVECAMDAKSPYFY
KKEDYLGKARQLVFNLKKNDQLRQDVREGAVAPERLVVMTSTELMSKDKK
EEMDKASNERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTT
YTQKQTRSADEPMTTFVTCSNCKNRWKFC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003617TFIIS/CRSP70_N_sub
IPR001222Znf_TFIIS
IPR003618TFIIS_cen_dom
IPR035100TF_IIS-typ
IPR036575TFIIS_cen_dom_sf
IPR035441TFIIS/LEDGF_dom_sf
IPR017923TFIIS_N