mRNA_P-littoralis_Contig132.54.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig132.54.1 vs. uniprot
Match: A0A6C0JA70_9ZZZZ (DUF4338 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JA70_9ZZZZ) HSP 1 Score: 78.6 bits (192), Expect = 1.790e-14 Identity = 36/81 (44.44%), Postives = 54/81 (66.67%), Query Frame = 1
Query: 103 FKEQACRRNIRVSICFDEYSSIVRTACWYCGDFTYKGYSGVDRVQNAGAYEKDNVVPCCKTCNFMKGPLSVNDFSGKVKHI 345
+K+ + +RNI+ +I EY +I+ C YCG F +G +G+DRV + YE N+VPCCKTCN +KG L++ F K+K+I
Sbjct: 365 YKKSSAKRNIKFNISETEYINILTYPCKYCGCFN-QGANGIDRVHSELPYEIGNIVPCCKTCNSLKGTLTLLQFKQKLKNI 444
BLAST of mRNA_P-littoralis_Contig132.54.1 vs. uniprot
Match: A0A843A3E2_9ARCH (Uncharacterized protein n=1 Tax=Thermoplasmata archaeon TaxID=1906666 RepID=A0A843A3E2_9ARCH) HSP 1 Score: 70.1 bits (170), Expect = 6.580e-13 Identity = 36/96 (37.50%), Postives = 53/96 (55.21%), Query Frame = 1
Query: 103 FKEQACRRNIRVSICFDEYSSIVRTACWYCG-----------DFTYKG----YSGVDRVQNAGAYEKDNVVPCCKTCNFMKGPLSVNDFSGKVKHI 345
+K A R ++ +E+ + ++ C+YCG + + KG Y+G+DRV N+ YE N VPCCKTCN MKG L N+F+ K+K I
Sbjct: 26 YKRTARIREYAFTLTKEEFLELTKSDCFYCGTEPKQYKSKYGNKSRKGIPFVYNGIDRVDNSVGYEYANCVPCCKTCNRMKGCLGFNEFTKKIKEI 121
BLAST of mRNA_P-littoralis_Contig132.54.1 vs. uniprot
Match: A0A6C0B6K3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0B6K3_9ZZZZ) HSP 1 Score: 70.9 bits (172), Expect = 8.310e-12 Identity = 28/79 (35.44%), Postives = 45/79 (56.96%), Query Frame = 1
Query: 136 VSICFDEYSSIVRTACWYCGDFTYKGYSGVDRVQNAGAYEKDNVVPCCKTCNFMKGPLSVNDFSGKVKHIARKQHALTD 372
+ + +++ SI + C+YCG KG++G+DR+ + YE DN V CC CN MKG + F +V+HI +T+
Sbjct: 254 IDLTIEQFESITKQPCYYCGIIQDKGFNGIDRMDSTKGYEIDNCVSCCTECNMMKGAVDNITFIQRVEHILTHNSMITN 332
BLAST of mRNA_P-littoralis_Contig132.54.1 vs. uniprot
Match: L8GNC2_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GNC2_ACACA) HSP 1 Score: 61.6 bits (148), Expect = 6.630e-10 Identity = 27/81 (33.33%), Postives = 44/81 (54.32%), Query Frame = 1
Query: 103 FKEQACRRNIRVSICFDEYSSIVRTACWYCGDFTYKGYSGVDRVQNAGAYEKDNVVPCCKTCNFMKGPLSVNDFSGKVKHI 345
+ ++A +RN+ + + ++ + C+ CG + GVDR N Y +N +PCCKTCNF+KG L + D +V I
Sbjct: 19 YMKKAAKRNLVFELERSHFDELLGSPCYLCG---VRSAGGVDRTDNTVGYTVENAMPCCKTCNFLKGTLPLCDVLTRVDEI 96
BLAST of mRNA_P-littoralis_Contig132.54.1 vs. uniprot
Match: A0A0F9UB66_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9UB66_9ZZZZ) HSP 1 Score: 63.2 bits (152), Expect = 9.160e-10 Identity = 32/93 (34.41%), Postives = 46/93 (49.46%), Query Frame = 1
Query: 103 FKEQACRRNIRVSICFDEYSSIVRTACWYCG-----DFTYKG------YSGVDRVQNAGAYEKDNVVPCCKTCNFMKGPLSVNDFSGKVKHIA 348
++ QA R + S+ + +V +C YCG KG YSG+DRV Y N VPCCKTCN+ KG +++ +F + IA
Sbjct: 89 YRHQAKTRGLGFSLSKKHFRELVTNSCHYCGIPPSNSVKKKGSNGEFVYSGIDRVATKYGYSVKNCVPCCKTCNWAKGTMNLEEFKSWITRIA 181
BLAST of mRNA_P-littoralis_Contig132.54.1 vs. uniprot
Match: A0A6C0ITL0_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ITL0_9ZZZZ) HSP 1 Score: 64.7 bits (156), Expect = 1.220e-9 Identity = 31/86 (36.05%), Postives = 49/86 (56.98%), Query Frame = 1
Query: 91 KWRVFKEQACRRNIRVSICFDEYSSIVRTACWYCGDFTYKGY-SGVDRVQNAGAYEKDNVVPCCKTCNFMKGPLSVNDFSGKVKHI 345
+++ ++ A ++ I + DE ++ +C+YC G+ +G+DR + Y KDNVV CCK CN++KG L NDF V HI
Sbjct: 274 RFKYYERCAIQKGINFDLSKDECCNLFDKSCYYCKHKDDNGFLNGIDRKSSYLGYIKDNVVTCCKMCNYIKGSLGHNDFLQIVDHI 359
BLAST of mRNA_P-littoralis_Contig132.54.1 vs. uniprot
Match: A0A0F9F6T2_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9F6T2_9ZZZZ) HSP 1 Score: 60.1 bits (144), Expect = 4.000e-8 Identity = 28/89 (31.46%), Postives = 44/89 (49.44%), Query Frame = 1
Query: 121 RRNIRVSICFDEYSSIVRTACWYCG--------------DFTYKGYSGVDRVQNAGAYEKDNVVPCCKTCNFMKGPLSVNDFSGKVKHI 345
+R I ++ FD + + C+YCG D+ +G+DRV N Y +DNVVPCCK CN+ K +S++ F + +
Sbjct: 207 KRKINFTLSFDTFVELTSQHCFYCGTKPSNITVNEAGNGDYVS---NGIDRVDNNKGYIEDNVVPCCKVCNYAKNTMSLDQFYSWISRV 292
BLAST of mRNA_P-littoralis_Contig132.54.1 vs. uniprot
Match: A0A7C1KMV7_9BACT (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A7C1KMV7_9BACT) HSP 1 Score: 57.8 bits (138), Expect = 9.930e-8 Identity = 31/102 (30.39%), Postives = 48/102 (47.06%), Query Frame = 1
Query: 103 FKEQACRRNIRVSICFDEYSSIVRTACWYCGDFTYKG------------YSGVDRVQNAGAYEKDNVVPCCKTCNFMKGPLSVNDFSGKVKHIARKQHALTD 372
+K A R + S+ + +I+ C+YCG YSG+DR+ + Y +NV+PCCK CN+ K +S+ F KV I Q A+ +
Sbjct: 83 YKRHAINRGYKWSLKRSDVENIINKDCFYCGSSPNNRKITKNSLNNGLLYSGIDRIDSEKDYTDNNVLPCCKICNYAKSNMSIKRF--KVWAIKLGQKAMAE 182
BLAST of mRNA_P-littoralis_Contig132.54.1 vs. uniprot
Match: A0A0F9SS21_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9SS21_9ZZZZ) HSP 1 Score: 56.2 bits (134), Expect = 1.090e-7 Identity = 26/82 (31.71%), Postives = 41/82 (50.00%), Query Frame = 1
Query: 154 EYSSIVRTACWYCG--------------DFTYKGYSGVDRVQNAGAYEKDNVVPCCKTCNFMKGPLSVNDFSGKVKHIARKQ 357
++ S+ + C+YCG D+ Y +GVDR+ N Y NV+PCCKTCN++K S+ +F + + Q
Sbjct: 34 DFKSLTQMQCYYCGIEPSQIYHNKELNGDYLY---NGVDRIDNNLGYIYGNVLPCCKTCNYVKSNQSMREFQAWIDRLVEHQ 112
BLAST of mRNA_P-littoralis_Contig132.54.1 vs. uniprot
Match: A0A3C2CGI7_9BACT (Uncharacterized protein n=1 Tax=Candidatus Nomurabacteria bacterium TaxID=2052152 RepID=A0A3C2CGI7_9BACT) HSP 1 Score: 56.6 bits (135), Expect = 2.810e-7 Identity = 24/95 (25.26%), Postives = 50/95 (52.63%), Query Frame = 1
Query: 94 WRVFKEQACRRNIRVSICFDEYSSIVRTACWYCGDFTYKGY-----------SGVDRVQNAGAYEKDNVVPCCKTCNFMKGPLSVNDFSGKVKHI 345
++ + + A R + + +E+ S++ +C+YC + + + +G+DR+ ++ Y +NVVPCCK CN+ K +SV +F + +
Sbjct: 83 FKTYADSAKNRCLSFELTKEEFVSLISKSCFYCNEPPSERWHEARGNGHMLSNGLDRIDSSKGYTTNNVVPCCKKCNYAKKQMSVEEFKSWITAV 177 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig132.54.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig132.54.1 >prot_P-littoralis_Contig132.54.1 ID=prot_P-littoralis_Contig132.54.1|Name=mRNA_P-littoralis_Contig132.54.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=125bp RRIRALQNKRYRRSTAYEKYLKARKTDVVYKWRVFKEQACRRNIRVSICFback to top mRNA from alignment at P-littoralis_Contig132:199639..200013- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig132.54.1 ID=mRNA_P-littoralis_Contig132.54.1|Name=mRNA_P-littoralis_Contig132.54.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=375bp|location=Sequence derived from alignment at P-littoralis_Contig132:199639..200013- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig132:199639..200013- >mRNA_P-littoralis_Contig132.54.1 ID=mRNA_P-littoralis_Contig132.54.1|Name=mRNA_P-littoralis_Contig132.54.1|organism=Pylaiella littoralis U1_48|type=CDS|length=375bp|location=Sequence derived from alignment at P-littoralis_Contig132:199639..200013- (Pylaiella littoralis U1_48)back to top |