mRNA_P-littoralis_Contig132.53.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig132.53.1 vs. uniprot
Match: A0A6H5JX36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX36_9PHAE) HSP 1 Score: 91.7 bits (226), Expect = 8.460e-23 Identity = 41/60 (68.33%), Postives = 46/60 (76.67%), Query Frame = 1
Query: 64 MASTDRDALAALYNATDGANWRQKANWNTDADLSLWHGIAVNDQGRVVQLNISGNNLRGI 243
MASTDRDAL ALYNAT+G W NWNT A LS WHG+ VNDQGRVV L ++ NNL+GI
Sbjct: 1 MASTDRDALVALYNATEGGRWSTNRNWNTGAPLSQWHGVHVNDQGRVVALELAENNLQGI 60
BLAST of mRNA_P-littoralis_Contig132.53.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 5.070e-22 Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 64 MASTDRDALAALYNATDGANWRQKANWNTDADLSLWHGIAVNDQGRVVQLNISGNNLRG 240
MA TDRDAL ALY AT G NWR+ NW+TDADL WHG+ VNDQGRVV+L + NNL G
Sbjct: 1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEG 59
BLAST of mRNA_P-littoralis_Contig132.53.1 vs. uniprot
Match: D8LL09_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL09_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 2.300e-21 Identity = 39/63 (61.90%), Postives = 50/63 (79.37%), Query Frame = 1
Query: 52 VSATMASTDRDALAALYNATDGANWRQKANWNTDADLSLWHGIAVNDQGRVVQLNISGNNLRG 240
+S+TM TDRDAL ALY+A G NW+ NWN DADLS WHGI +NDQGRVV+++++ NNL+G
Sbjct: 47 ISSTMPQTDRDALVALYDAAGGFNWKNNGNWNADADLSKWHGININDQGRVVEVHLAANNLQG 109
BLAST of mRNA_P-littoralis_Contig132.53.1 vs. uniprot
Match: A0A6H5K3C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3C2_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 6.500e-21 Identity = 37/61 (60.66%), Postives = 44/61 (72.13%), Query Frame = 1
Query: 64 MASTDRDALAALYNATDGANWRQKANWNTDADLSLWHGIAVNDQGRVVQLNISGNNLRGIL 246
MA TDRDAL A+Y AT G W NW+TD+DL WHG+ VNDQGRVV+L + NNL G+L
Sbjct: 1 MAQTDRDALVAMYRATGGEKWSTSQNWDTDSDLKTWHGVNVNDQGRVVKLELGFNNLEGVL 61
BLAST of mRNA_P-littoralis_Contig132.53.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 7.480e-21 Identity = 42/59 (71.19%), Postives = 48/59 (81.36%), Query Frame = 1
Query: 64 MASTDRDALAALYNATDGANWRQKANWNTDADLSLWHGIAVNDQGRVVQLNISGNNLRG 240
MASTDRD L ALYNAT+GANW+ NW TDADLS W G+ VN QGRVV+L++S NNLRG
Sbjct: 1 MASTDRDVLVALYNATEGANWQNSINWGTDADLSQWFGVTVNHQGRVVRLDLSFNNLRG 59
BLAST of mRNA_P-littoralis_Contig132.53.1 vs. uniprot
Match: A0A6H5K8T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T5_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 9.180e-21 Identity = 43/80 (53.75%), Postives = 52/80 (65.00%), Query Frame = 1
Query: 1 RILHLFRKLPPSLHSPQVSATMASTDRDALAALYNATDGANWRQKANWNTDADLSLWHGIAVNDQGRVVQLNISGNNLRG 240
R+ H + + + S SA M STDRDAL ALY+ATDGANW+ K NWNTD L W G+ NDQGRVV L++ N L G
Sbjct: 88 RLHHEYNRASANCQSMPASAIM-STDRDALVALYDATDGANWKSKQNWNTDLPLGRWRGVEANDQGRVVGLDLPDNKLHG 166
BLAST of mRNA_P-littoralis_Contig132.53.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 1.400e-20 Identity = 40/59 (67.80%), Postives = 48/59 (81.36%), Query Frame = 1
Query: 64 MASTDRDALAALYNATDGANWRQKANWNTDADLSLWHGIAVNDQGRVVQLNISGNNLRG 240
MA TDRD L ALYNATDG NW+ K NW+T+ADLS WHG+ +DQGRVV+L++S N LRG
Sbjct: 1 MAPTDRDVLVALYNATDGPNWKNKTNWDTNADLSDWHGVKADDQGRVVKLSLSANKLRG 59
BLAST of mRNA_P-littoralis_Contig132.53.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 6.570e-20 Identity = 39/59 (66.10%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 64 MASTDRDALAALYNATDGANWRQKANWNTDADLSLWHGIAVNDQGRVVQLNISGNNLRG 240
MA TDRDAL LY AT G NWR++ NW+TDADL WHG+ VNDQGRVV+L + NNL G
Sbjct: 1 MAQTDRDALVVLYRATGGENWRERQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEG 59
BLAST of mRNA_P-littoralis_Contig132.53.1 vs. uniprot
Match: D7FM75_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM75_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 2.300e-19 Identity = 40/58 (68.97%), Postives = 49/58 (84.48%), Query Frame = 1
Query: 73 TDRDALAALYNATDGANWRQKANWNTDADLSLWHGIAVNDQGRVVQLNISGNNLRGIL 246
+DRDAL +LYNAT GANW+QK NW+T ADLS W GI V+DQGRVV+LN+ NNL+GI+
Sbjct: 40 SDRDALVSLYNATGGANWKQKENWDTGADLSQWCGIKVDDQGRVVELNLFWNNLQGII 97
BLAST of mRNA_P-littoralis_Contig132.53.1 vs. uniprot
Match: A0A6H5KDU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDU0_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 2.710e-19 Identity = 39/60 (65.00%), Postives = 45/60 (75.00%), Query Frame = 1
Query: 61 TMASTDRDALAALYNATDGANWRQKANWNTDADLSLWHGIAVNDQGRVVQLNISGNNLRG 240
TMA DR AL ALYNAT GA WR K NWNT A LS W+G+ V+ QGRVV L++ GNNL+G
Sbjct: 139 TMAQPDRKALVALYNATGGAKWRNKRNWNTRAALSQWYGVEVDSQGRVVTLHLGGNNLQG 198 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig132.53.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig132.53.1 >prot_P-littoralis_Contig132.53.1 ID=prot_P-littoralis_Contig132.53.1|Name=mRNA_P-littoralis_Contig132.53.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=82bp RILHLFRKLPPSLHSPQVSATMASTDRDALAALYNATDGANWRQKANWNTback to top mRNA from alignment at P-littoralis_Contig132:199389..199634+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig132.53.1 ID=mRNA_P-littoralis_Contig132.53.1|Name=mRNA_P-littoralis_Contig132.53.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=246bp|location=Sequence derived from alignment at P-littoralis_Contig132:199389..199634+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig132:199389..199634+ >mRNA_P-littoralis_Contig132.53.1 ID=mRNA_P-littoralis_Contig132.53.1|Name=mRNA_P-littoralis_Contig132.53.1|organism=Pylaiella littoralis U1_48|type=CDS|length=246bp|location=Sequence derived from alignment at P-littoralis_Contig132:199389..199634+ (Pylaiella littoralis U1_48)back to top |