prot_P-littoralis_Contig132.40.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig132.40.1
Unique Nameprot_P-littoralis_Contig132.40.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length647
Homology
BLAST of mRNA_P-littoralis_Contig132.40.1 vs. uniprot
Match: A0A6H5JB67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB67_9PHAE)

HSP 1 Score: 520 bits (1338), Expect = 3.020e-172
Identity = 326/574 (56.79%), Postives = 369/574 (64.29%), Query Frame = 0
Query:   28 RRGM--ESRRKAATAAAERDILQQQSHGLQLEVKRAMRVASSTFREGDRVESRWRRPTRLDKPRLDPDGWHLGRVVQSHKDRSRVDVLFEDGDRERLSGIPAKYVRLAPSSSFLRRPLLSDSGVHDD----AGDESHDSSSSAPP---PTPMPTELLCPASCRELAYIAAVNKSLRLTWEDAVPIGQELERLRMLREKKMLDRPEWQGSFPLVDFQVTKRLSLGAGGMAG--VRTRSGTGREAAAA--AARDYR-RARHQVQDTTRGRFKT-QSRTSXXXXXXXXXXXXXLAIPRT-STVQKKRGEDKHEHSGGH--QGDIGKPAENDVSVIGMSSTSSMIMSGTASLPSSASLPSSS-----VALVKAQSKLVAAAMAYDRCVTEVIDCLDRGATTFRAARTYSEQQKAFEESTAKLGPAQPARAGYTDWRGSRVVGLQNATLDVVEAMDAWAVEWAAARDGGFGAVHAGGMNSKDGVGGNKSIAIEGEVEGRKDGVAAVVAVTAPPFLWEGMPLVSTIIGHSAKLVAGAPELKEWYGPGFPIERNPFFLAYPVDDRPVTPRNALVRAWVNGE 578
            RRG+  +SR KA  AA  ++ L+QQS GL LE+KRAM+VA++TFREGDRVESRWRRPTRLDK ++DP  WH GRVVQSHK   RVDV+FEDGD ERLSGI  K+VRLAP         L  SG  DD    AG     +S    P   PTP PTEL+C A  RELA+IA   KSLR TWE  VPI QE+ RLRML E+KM  RPEW+GSFPLVDF  TKRL  GAGGMA   VR    T   A +A  A RD++ +A+  V+D +R R +T QS  S             L +P T   VQ+   +D+    G      D     E +    G   +S                          AL+ AQ+KLV+AA+AYDRCV  V DCLDRG   FR ARTYSEQQKAFEESTA LGPAQPARAGY DWRGS VVGLQ+ATLDVVEAMD WA EWA A+ G             D  GG+ + A EG V   KDG    VAV APPFLWEG PLVST+IG SAKLVAGAPELKEWYGPGFPIERNPFFLAYPVDDRPVTPR+ALVRAWVNGE
Sbjct:  226 RRGVSAKSRLKAMAAARHQETLEQQSQGLHLEMKRAMKVATTTFREGDRVESRWRRPTRLDKAKIDPGAWHPGRVVQSHKGGDRVDVVFEDGDGERLSGISTKHVRLAPPXXXXXXXXLVSSGRDDDYVTAAGVTGRRNSCDRRPSCAPTPAPTELVCSAIRRELAHIACATKSLRCTWEVPVPISQEMARLRMLEERKMRSRPEWRGSFPLVDFSATKRLPFGAGGMARTVVRKVKNTAASAVSAVLATRDHQLQAQSTVRDDSRTRLRTVQSSPSSS-----------LKMPMTVPQVQRDENDDRDLGQGDRCTSTDDNTVKETNARSAGKRRSSXXXXXXXXXXXXXXXXXXXXXXXXXTALLAAQAKLVSAAVAYDRCVAGVRDCLDRGCAAFRLARTYSEQQKAFEESTATLGPAQPARAGYKDWRGSPVVGLQSATLDVVEAMDDWAAEWAVAKGG-----------KTDAGGGDNAFAEEGVV--LKDGAVEEVAVAAPPFLWEGSPLVSTVIGQSAKLVAGAPELKEWYGPGFPIERNPFFLAYPVDDRPVTPRSALVRAWVNGE 775          
BLAST of mRNA_P-littoralis_Contig132.40.1 vs. uniprot
Match: D8LCG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCG8_ECTSI)

HSP 1 Score: 504 bits (1298), Expect = 2.720e-165
Identity = 314/567 (55.38%), Postives = 355/567 (62.61%), Query Frame = 0
Query:   28 RRGMES--RRKAATAAAERDILQQQSHGLQLEVKRAMRVASSTFREGDRVESRWRRPTRLDKPRLDPDGWHLGRVVQSHKDRSRVDVLFEDGDRERLSGIPAKYVRLAPSSSFLRRPLLSDSGVHDD----AGDESHDSSSSAPP---PTPMPT-ELLCPASCRELAYIAAVNKSLRLTWEDAVPIGQELERLRMLREKKMLDRPEWQGSFPLVDFQVTKRLSLGAGGMA---GVRTRSGTGREAAAAAARDYRRARHQ--VQDTTRGRFKTQSRTSXXXXXXXXXXXXXLAIPRT-STVQKKRGEDKHEHSGGHQGDIGKPAENDVSVIGMSSTSSMIMSGTASLPSSASLPSSSVALVKAQSKLVAAAMAYDRCVTEVIDCLDRGATTFRAARTYSEQQKAFEESTAKLGPAQPARAGYTDWRGSRVVGLQNATLDVVEAMDAWAVEWAAARDGGFGAVHAGGMNSKDGVGGNKSIAIEGEVEGRKDGVAAVVAVTAPPFLWEGMPLVSTIIGHSAKLVAGAPELKEWYGPGFPIERNPFFLAYPVDDRPVTPRNALVRAWVNGE 578
            RRG+ +  R KA  AA  ++ L+QQS GL LE+KRAM+VA++TFREGDRVESRWRRPTRLDK ++DP  WH GRVVQSHKD  RVDV+FEDGD ERLSGI  K+VRLAP                      AG     +S    P   PT  PT EL+C AS  ELA+IA   K LR TWED VPI QE+ RLRML E+KM  RPEW+GSFPLVDF  TKRL  GAGGMA   G R R+     A AA A   R+ + Q  V D +R R +T                  L +P T   V ++   D+ +  G            + +        S                  + AL++AQ+KLV+AA+AYDR V    DCLDRG   FR ARTYSEQQKAFEESTA LGPAQPARAGYTDWRGS VVGLQ+ATLDVVEAMDAWA EWAA + G             D  GG  + A EG V   KDG  A VAV APPFLWEG PLVSTIIG SAKLVAGAPELK WYGPGFPIERNPFFLAYPVDDRPVTPR+ALVRAWVNGE
Sbjct:  308 RRGVSATLRLKAMAAARHQETLEQQSRGLHLEMKRAMKVATTTFREGDRVESRWRRPTRLDKAKIDPGAWHPGRVVQSHKDGGRVDVVFEDGDGERLSGISTKHVRLAPPXXXXXXXXXXXXXXXXXXVMAAGVSGRRNSCDRRPSCVPTSAPTDELVCSASRGELAHIACATKFLRCTWEDPVPISQEMARLRMLEERKMRGRPEWRGSFPLVDFSATKRLPFGAGGMARTGGRRARNAAASAATAAVATRDRQLQAQGTVHDDSRTRLRTVQ----------WSPSSSLKMPTTVPQVHREENIDRDQGQGDRCTSTDDNTVKETNARSAGKRRSSXXXXXXXXXXXXXXXXGATALLEAQAKLVSAALAYDRYVAGARDCLDRGCAAFRLARTYSEQQKAFEESTAILGPAQPARAGYTDWRGSPVVGLQSATLDVVEAMDAWAAEWAADKGG-----------KPDTGGGGNAFAEEGVV--LKDGAVAEVAVAAPPFLWEGSPLVSTIIGQSAKLVAGAPELKGWYGPGFPIERNPFFLAYPVDDRPVTPRSALVRAWVNGE 851          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig132.40.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JB67_9PHAE3.020e-17256.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCG8_ECTSI2.720e-16555.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 64..125
e-value: 5.5E-6
score: 27.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 306..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..285

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig132contigP-littoralis_Contig132:147987..150262 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig132.40.1mRNA_P-littoralis_Contig132.40.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig132 147987..150262 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig132.40.1 ID=prot_P-littoralis_Contig132.40.1|Name=mRNA_P-littoralis_Contig132.40.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=647bp
TASRLEGEGKRPRFRQRSPAATSKAAPRRGMESRRKAATAAAERDILQQQ
SHGLQLEVKRAMRVASSTFREGDRVESRWRRPTRLDKPRLDPDGWHLGRV
VQSHKDRSRVDVLFEDGDRERLSGIPAKYVRLAPSSSFLRRPLLSDSGVH
DDAGDESHDSSSSAPPPTPMPTELLCPASCRELAYIAAVNKSLRLTWEDA
VPIGQELERLRMLREKKMLDRPEWQGSFPLVDFQVTKRLSLGAGGMAGVR
TRSGTGREAAAAAARDYRRARHQVQDTTRGRFKTQSRTSSSSSLLLLSSS
SSLAIPRTSTVQKKRGEDKHEHSGGHQGDIGKPAENDVSVIGMSSTSSMI
MSGTASLPSSASLPSSSVALVKAQSKLVAAAMAYDRCVTEVIDCLDRGAT
TFRAARTYSEQQKAFEESTAKLGPAQPARAGYTDWRGSRVVGLQNATLDV
VEAMDAWAVEWAAARDGGFGAVHAGGMNSKDGVGGNKSIAIEGEVEGRKD
GVAAVVAVTAPPFLWEGMPLVSTIIGHSAKLVAGAPELKEWYGPGFPIER
NPFFLAYPVDDRPVTPRNALVRAWVNGETVTTVSQVLLEEREREEAALKV
ILDKQASVPSWWPTCRAAVGGEAHYERIRRAEKSIARAEWQLIKGKE
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