mRNA_P-littoralis_Contig132.39.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig132.39.1
Unique NamemRNA_P-littoralis_Contig132.39.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig132.39.1 vs. uniprot
Match: D8LCG9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCG9_ECTSI)

HSP 1 Score: 332 bits (851), Expect = 3.230e-105
Identity = 188/250 (75.20%), Postives = 203/250 (81.20%), Query Frame = 1 
Query:  139 MASSESKNSTKPASKAKTSRSSPSLLKVVIRRLPHQMKEEEFVTALVAATADAGMGERGGSWDLMYFTPGKMSKKRGRVTGTAYLHIDRGRGASADLGLINLRAAVLASDALTPSTGPVSAASSTSKDRDGGGKQSGDTSNTSAPTAAVPAAAGPTVEAAPFQKLFKQKPKRDIRVGTIEKDADYKAFCTALQSSALPLPSADVQADIKESEGKEEPKPQNALLDFLKERGAKRVRDSQRAAALGSSAHR 888
            M S+ +K S KP SKAK++RSSPSLLKVV+RRLPHQMKEEEFV AL AA +DAGMGERGGSWDLMYFTPGKMSKKRGRVTGTAYLHIDR RGA+ADL L  LRAAV ASDALTP+  P S++S          K+               A AGPTVEAAPFQKLFKQKPKRD+RVGTIEKDA YKAFC ALQS A PLPSADVQADI+ESEGKEEPKPQNALLDFL+ERGA+RVRDSQRAAALGSSA R
Sbjct:    1 MTSNVAKKSAKPPSKAKSARSSPSLLKVVVRRLPHQMKEEEFVEALAAAASDAGMGERGGSWDLMYFTPGKMSKKRGRVTGTAYLHIDRERGANADLSLSKLRAAVSASDALTPAAEPASSSS----------KEGSXXXXXXXXXXXXTATAGPTVEAAPFQKLFKQKPKRDVRVGTIEKDASYKAFCAALQSPAQPLPSADVQADIRESEGKEEPKPQNALLDFLRERGARRVRDSQRAAALGSSASR 240
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BLAST of mRNA_P-littoralis_Contig132.39.1 vs. uniprot
Match: A0A836C7E8_9STRA (Smg4_UPF3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7E8_9STRA)

HSP 1 Score: 101 bits (252), Expect = 5.000e-19
Identity = 75/225 (33.33%), Postives = 110/225 (48.89%), Query Frame = 1 
Query:  205 PSLLKVVIRRLPHQMKEEEFVTALVAATADAGMGERGGSWDLMYFTPGKMSKKRGRVTGTAYLHIDRGRGASADLGLINLRAAVLASDALTPSTGPVSAASSTSKDRDGGGKQSGDTSNTSAPTAAVPAAAGPTVEAAPFQKLFKQKPKRDIRVGTIEKDADYKAFCTALQSSALPLPSADVQADIKESEGKEEPK-----------PQNALLDFLKERGAKRVR 846
            P+ +K+V+RRL      E+F + +    A+A   ER  ++ ++Y++PGK+SKKRG++TG  YL ++R  G       +   AAV   DA+            T    D                   P AA P VE AP+Q++F+ KP+RD   GT E+D DY+AFC AL+     LPSADVQ D + +                  P  AL+ +++ER A R R
Sbjct:   60 PAPIKIVVRRLSPYFTPEDFNSLMETVAAEAARAERPLAFTVLYYSPGKVSKKRGKITGAGYLVVERAAG-------VTPAAAV---DAVAXXXXXXXXXFDTHARAD-------------------PDAARPLVELAPYQRVFRTKPRRDNLDGTFERDPDYRAFCAALERPVDKLPSADVQLDQRAAXXXXXXXXXXXXXXXXGAPVAALVQYIRERRAARAR 255
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BLAST of mRNA_P-littoralis_Contig132.39.1 vs. uniprot
Match: A0A8K1FA17_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FA17_PYTOL)

HSP 1 Score: 68.6 bits (166), Expect = 1.090e-8
Identity = 37/74 (50.00%), Postives = 50/74 (67.57%), Query Frame = 1 
Query:  607 VEAAPFQKLFKQKPKRDIRVGTIEKDADYKAFCTALQSSALPLPSADVQADIKESEGKEEPKPQNALLDFLKER 828
            V+ APFQK+ ++K ++D ++GTI++D D+ AF   L      LPSADV AD KESEG E  KP  AL+ +L ER
Sbjct:  183 VDFAPFQKIPREKARKDTKIGTIDRDPDFLAFLEELAKPNEKLPSADVVADAKESEGAE--KPVAALVQYLNER 254
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BLAST of mRNA_P-littoralis_Contig132.39.1 vs. uniprot
Match: A0A2D4CDX7_PYTIN (Smg4_UPF3 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDX7_PYTIN)

HSP 1 Score: 63.2 bits (152), Expect = 4.770e-7
Identity = 36/74 (48.65%), Postives = 47/74 (63.51%), Query Frame = 1 
Query:  607 VEAAPFQKLFKQKPKRDIRVGTIEKDADYKAFCTALQSSALPLPSADVQADIKESEGKEEPKPQNALLDFLKER 828
            V+ APFQK+ ++K +RD +VGTIEKD +Y AF   L   A  LPSAD+  D K+    E  KP  AL+ +L ER
Sbjct:  198 VDFAPFQKIPREKQRRDPKVGTIEKDPEYLAFLEDLAKPAEKLPSADLALDSKDGAAAE--KPVAALVQYLNER 269
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BLAST of mRNA_P-littoralis_Contig132.39.1 vs. uniprot
Match: UPI001E8EB04B (Smg-4/UPF3 family-domain-containing protein n=1 Tax=Emericellopsis atlantica TaxID=2614577 RepID=UPI001E8EB04B)

HSP 1 Score: 60.1 bits (144), Expect = 7.250e-6
Identity = 67/210 (31.90%), Postives = 96/210 (45.71%), Query Frame = 1 
Query:  217 KVVIRRLPHQMKEEEFVTALVAA-TADAGMGERGGSWDLMYFTPGKMSKKRGR--VTGTAYLHIDRGRGASADLGLINLRAAVLASDALTPSTGPVSAASSTSKDRDGGGKQSGDTSNTSAPTAAVPAAAGPTVEAAPFQKLFKQKPKRDIRVGTIEKDADYKAFCTALQSSALPLPSADVQADIKESEGKEEPKPQNALLDFLKERGAK 837
            K+V+RRLP  M EEEFVT L      D G        D   F  G +SK   +    G AYLH+ R      D+  +N        DA+   T                     D  NT   T+ V     PTVE   ++K+   K + D R GTI++D +++AF   L+S A P+ + DV+A+ +ES+  +       L++FLKE+ AK
Sbjct:   67 KLVVRRLPPGMTEEEFVTILGPEWEVDKG------KVDWFDFVAGGISKDLSKPPTPGRAYLHLMR----KDDIMPLN--------DAVRSKTWE-------------------DVKNTFTNTSLV---GPPTVEFCLYKKVPGAKKRVDSRQGTIDQDPEFQAF---LESLANPVQTKDVEAEFEESDKTDAKVTSTPLVEFLKEKKAK 233
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BLAST of mRNA_P-littoralis_Contig132.39.1 vs. uniprot
Match: A0A662YFV9_9STRA (Smg4_UPF3 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFV9_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 7.520e-6
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 1 
Query:  607 VEAAPFQKLFKQKPKRDIRVGTIEKDADYKAFCTALQSS---ALPLPSADVQADIKESEGKEEPKPQNALLDFLKER 828
            VE APFQK+ ++K ++D +VGTI++D +Y AF   LQ     +L LPSA+  AD+ E E  E  KP   L+ +L ER
Sbjct:  147 VEFAPFQKIPREKQRKDAKVGTIDRDPEYLAFLEELQKPRDVSLSLPSAEAVADMAEGEAVE--KPVATLVKYLNER 221
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BLAST of mRNA_P-littoralis_Contig132.39.1 vs. uniprot
Match: A0A3R7HC05_9STRA (Smg4_UPF3 domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HC05_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.110e-5
Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 1 
Query:  607 VEAAPFQKLFKQKPKRDIRVGTIEKDADYKAFCTALQSSALPLPSADVQADIKESEGKEEPKPQNALLDFLKERGAK 837
            VE APFQK+ ++K ++D +VGTI++D +Y AF   L      LPSA+   D+ E E  E  +P  AL+ +L ER  K
Sbjct:  344 VEFAPFQKIPREKQRKDAKVGTIDRDPEYTAFLEELAKPKDKLPSAEAAVDMAEGESVE--RPVAALVKYLNERKGK 418
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BLAST of mRNA_P-littoralis_Contig132.39.1 vs. uniprot
Match: A0A484E1H6_BRELC (Smg4_UPF3 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E1H6_BRELC)

HSP 1 Score: 58.9 bits (141), Expect = 1.290e-5
Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 1 
Query:  607 VEAAPFQKLFKQKPKRDIRVGTIEKDADYKAFCTALQSSALPLPSADVQADIKESEGKEEPKPQNALLDFLKERGA 834
            VE APFQK+ ++K ++D +VGTI++D ++ AF   L +     PSA+  AD+ E E  E  KP  AL+ +L ER A
Sbjct:  165 VEFAPFQKIPREKQRKDAKVGTIDRDPEFAAFLEQLATVKDTSPSAEALADLAEGEATE--KPVAALVKYLNERKA 238
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BLAST of mRNA_P-littoralis_Contig132.39.1 vs. uniprot
Match: W2PRS1_PHYPN (Smg4_UPF3 domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2PRS1_PHYPN)

HSP 1 Score: 58.9 bits (141), Expect = 1.320e-5
Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = 1 
Query:  607 VEAAPFQKLFKQKPKRDIRVGTIEKDADYKAFCTALQSSALPLPSADVQADIKESEGKEEPKPQNALLDFLKER 828
            VE APFQK+ ++K ++D +VGTI++D +Y AF   L      LPSA+   DI E E  E  KP  AL+ +L ER
Sbjct:  172 VEFAPFQKVPREKQRKDAKVGTIDRDPEYIAFLEELAKPKDKLPSAEALVDIAEGETVE--KPVAALVKYLNER 243
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BLAST of mRNA_P-littoralis_Contig132.39.1 vs. uniprot
Match: A0A3M6VSA1_9STRA (Smg4_UPF3 domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VSA1_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 2.210e-5
Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 1 
Query:  607 VEAAPFQKLFKQKPKRDIRVGTIEKDADYKAFCTALQSSALPLPSADVQADIKESEGKEEPKPQNALLDFLKER 828
            VE APFQK+ ++K ++D +VGTI++D +Y AF   L      LPSA+   D+ E E  E  KP  AL+ +L ER
Sbjct:  165 VEFAPFQKIPREKQRKDAKVGTIDRDPEYVAFLNELAKPKDKLPSAEPVVDMAEGETVE--KPVAALVKYLNER 236
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig132.39.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LCG9_ECTSI3.230e-10575.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C7E8_9STRA5.000e-1933.33Smg4_UPF3 domain-containing protein n=1 Tax=Tribon... [more]
A0A8K1FA17_PYTOL1.090e-850.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4CDX7_PYTIN4.770e-748.65Smg4_UPF3 domain-containing protein n=1 Tax=Pythiu... [more]
UPI001E8EB04B7.250e-631.90Smg-4/UPF3 family-domain-containing protein n=1 Ta... [more]
A0A662YFV9_9STRA7.520e-645.45Smg4_UPF3 domain-containing protein n=2 Tax=Nothop... [more]
A0A3R7HC05_9STRA1.110e-542.86Smg4_UPF3 domain-containing protein n=4 Tax=Phytop... [more]
A0A484E1H6_BRELC1.290e-543.42Smg4_UPF3 domain-containing protein n=1 Tax=Bremia... [more]
W2PRS1_PHYPN1.320e-545.95Smg4_UPF3 domain-containing protein n=8 Tax=Phytop... [more]
A0A3M6VSA1_9STRA2.210e-544.59Smg4_UPF3 domain-containing protein n=2 Tax=Perono... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig132contigP-littoralis_Contig132:140728..146897 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog42099.EPrPV00000022347
PFAMsSmg4_UPF3
Model size1560
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.02e-06
EggNOG OGsKOG1295@1|root,KOG1295@2759|Eukaryota,1MGXT@121069|Pythiales
Ec32 ortholog descriptionNucleotide-binding alpha-beta plait domain
Ec32 orthologEc-26_005010.1
DescriptionSmg-4/UPF3 family
Cds size1560
COG categoryA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789603.765047-CDS-P-littoralis_Contig132:140727..1409461680789603.765047-CDS-P-littoralis_Contig132:140727..140946Pylaiella littoralis U1_48CDSP-littoralis_Contig132 140728..140946 +
1680789603.7760215-CDS-P-littoralis_Contig132:143700..1438531680789603.7760215-CDS-P-littoralis_Contig132:143700..143853Pylaiella littoralis U1_48CDSP-littoralis_Contig132 143701..143853 +
1680789603.788978-CDS-P-littoralis_Contig132:145024..1452821680789603.788978-CDS-P-littoralis_Contig132:145024..145282Pylaiella littoralis U1_48CDSP-littoralis_Contig132 145025..145282 +
1680789603.7991388-CDS-P-littoralis_Contig132:145898..1462631680789603.7991388-CDS-P-littoralis_Contig132:145898..146263Pylaiella littoralis U1_48CDSP-littoralis_Contig132 145899..146263 +
1680789603.807513-CDS-P-littoralis_Contig132:146332..1468971680789603.807513-CDS-P-littoralis_Contig132:146332..146897Pylaiella littoralis U1_48CDSP-littoralis_Contig132 146333..146897 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig132.39.1prot_P-littoralis_Contig132.39.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig132 140728..146897 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig132.39.1

>prot_P-littoralis_Contig132.39.1 ID=prot_P-littoralis_Contig132.39.1|Name=mRNA_P-littoralis_Contig132.39.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=520bp
PDSTQHKPNRERSPEQGREEKRAETGKGHRREKRATYSSCCCGAWTMASS
ESKNSTKPASKAKTSRSSPSLLKVVIRRLPHQMKEEEFVTALVAATADAG
MGERGGSWDLMYFTPGKMSKKRGRVTGTAYLHIDRGRGASADLGLINLRA
AVLASDALTPSTGPVSAASSTSKDRDGGGKQSGDTSNTSAPTAAVPAAAG
PTVEAAPFQKLFKQKPKRDIRVGTIEKDADYKAFCTALQSSALPLPSADV
QADIKESEGKEEPKPQNALLDFLKERGAKRVRDSQRAAALGSSAHRGSGS
SRRVSSSSLGGGAGSATTAAAAKTPVSASRATSGAAASSSSSSSRPPPSP
SPSPQKSQKTSAIGTGVSVMSASYRATLAKAAAAAKTTTPTPAEQQGPSE
ASKSRSSSTKGGGGSGGGSGSRAASRGEKIAVSAAAPTPTPRILSRTVDS
RSKPAAAAAAALSATAAASSARRPTASATPSSRSGNSSGGSGDGGKRGAS
GGKSRTVGKPSGTTSRPKK*
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mRNA from alignment at P-littoralis_Contig132:140728..146897+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig132.39.1 ID=mRNA_P-littoralis_Contig132.39.1|Name=mRNA_P-littoralis_Contig132.39.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6170bp|location=Sequence derived from alignment at P-littoralis_Contig132:140728..146897+ (Pylaiella littoralis U1_48)
CCAGACAGCACCCAACACAAACCAAACAGAGAAAGATCTCCGGAGCAGGG
GAGGGAGGAGAAGAGAGCAGAGACAGGGAAGGGCCATCGAAGGGAGAAAC
GCGCTACCTACAGCAGCTGCTGCTGCGGTGCGTGGACCATGGCGAGCAGT
GAATCGAAGAACAGCACCAAGCCGGCTTCGAAAGCGAAGACCTCGAGGTC
TTCTCCTTCTCTCCTCAAGGTCCGTCTTCATTACAGCAGTATGCACAGCG
CAGATGAGCAGGCAGTTGTAAATAAAGCACAGACACAGCAGTAGAGCAGC
TCCAGCAGAGGCTGCTGGCTCAAAACAATGATCGGCACCGACGCCCTTCG
TGACCTTTGTGTGTGTGGTCGACCATGCATGACGGCGGTGGGAGTGGTGC
CACATACTTTACGCGCGTTCAAGCGCTGGAAGTTCAGGCACAAAATGATG
ATTTCGCCCCGATGATACTTGCACGTGTATAAATCTAACGTATGAATACA
GGTACTTGTGGAATTGCCCGACTCTCCTCCTTCCTGCTGATGCTACTGCT
GTACTGCTGTGCGCTGTGCACCGGAGTCATCAGTACCTGTAGGGTGTGTC
TACCCTCTCGCGCCGGCTGCCTACTCGCTTGTTAAGAAAGTGCTTGTCCC
CCCACACTTCCTTGCACCCCTTCTCGCTAGTCACACGCCGAAACATATCC
AGCAGTGACTCAAGCTCTGGGCGAACCTGGCTTTGACCTACCACTGCTCA
CAGGCCTCTTAACCCTTTGAACCCCAATCCCAATTGGGGACAATTTGGGG
ACACCTTTTTTTTTTTACTTGGGTTTTGAAGGCGCCTATCTACAGGTATT
CTGGGTGTGGTTCCGTGAGCTCGATGGAATATGTGTGGATCGACCAATAG
TTGGCTACCTTCGTGCCACATTTGTTTTTTATTATTATTATGGGAGACCA
AGAGCGCCCGGCTGTTAGGTTTGTTGTGTGTTTTTCTCTTCCCTCGACAG
CGTGGTAGACACAACGGCGATCGTCTTGTTGTATCACACTTCATGCCGGC
AACCCTCCCTGCATTGCACACAACATGCACACATACATACGACATGATAC
AAAGACTATGTGTTACACTACCGCTCATATCATATGAAACGCTGATGCTG
ACGTGCTGCTGCACTCACATACCCTGATTTCTGCAACTATTATTCTACTG
CTGCTGCTGCTGCTGCTGCTGTGCATGCTGCAGCAAGCAGCTAGCTGATG
ATGTGTCGTGCGATGGGTTGGTGAGACACACACTACGCACACGGGGGCCG
ACCCTACGAACAGACACATCACGCCACGCACGTTTGAAAGCTCACAAACA
TACCCGGCGATCTCGTACGAGTATCATCATCACATGGGTACCATTACATG
CCGACACCCTTGCGTTGATCACATACATGCAACATACAGATGATATGTTT
AACTTCAGTAGTGCAGCTGCTGCTTGCTGCTGCTGATGAGATGCTGTAGA
CCCTGATAAAGTGTCGTGCGCGGGTACAACCTTGCGGAGTGGAACCCTAC
TGCTGCTGTGGTTGTCGAGCGGGGTACCCTGATCTGCCATGCTAAGTGGC
GGTGTTGCTGCGTGCTACCTTGCATACAGCAGTATCCCTTTGAAGTAAAC
ATCCTGCAAAACTAAACAAACAACTTTTGTGTAGTTGACCCCCCCAAAAA
AGTTTGGTGTAGCTTTAGACTGAAATCTGTCCCCATTTTTTTCAGGGCAA
ATCGGAGACAGATTTCTGTGTATAACCAAGTCACACCCTTTTTTCACCGG
ACAGAGCCAGCGAGACGTCAGTCCTTTTTTTTTTTTTGAGACTGTCCAGC
ATTCGCCAATCATCGGCGCACCGGAATCAGTTAATATTTGGCTCCATGAT
TATTTTTTTCAGACCCCTGGGGGGTCAAAGGGTTAAGCGTGTGTGAGAGT
TCAGAGCAGCTGGTTCGGAGTACTGTACTTGGAATATATTATACGGAGTA
CGTAGAACGCACGAAGAAGGGGAAAGGTCTTACAGCACCAAGACTGCAGT
ACACGAGGTCTAGTACGTACCAGGTAGAATGACAGCAGTACGTGCCCGGA
AAACATCTGCAAAGTTCGCCGTCTGTACAGCAGTATGTGGATGCGTGTGT
TTCATGCGTGTGGAGCTCGCAGATATTTTGCATACACAATCCGGCATATT
CACAACTCTACTTGCTGTACAGTATTGCTGTAGTATCCGAAATATCCGCG
AGCTTCACACGCACACACTCGCGATTTTCATCACCCTACCATGACGATGC
CACAGCCGCATACTTGTACACACAAATAGCGGAACCACATACAAACCATC
ATTTTGGATGCGTGCTTGTAGCTTGACTCTTTCGAAGCACTGAGTATTTG
GTTAGGATAGAAGCAGCTGTAGTGAAAGTGGCGAGAAGAGACGGGATGAC
AACACAGACACACACCTGCAATCAAAGACCTGCTATCATATTGAGGCCGT
TGAGTCCGCAACACGAGTTGATTTGCTCTCGTAGGCAGCAGCTAGTGTTA
CACTACGCACCTGACCGGCGCACTGGCTTAAGCGTCTGATCAACTGCAAC
CCTCTGCCGCCGTCTACTTGTACCCGGGCTGAGTTGACGCCAACAGAGGC
AGCCAGCAGCGACTTATCCCCGCTATCCTCGATTCGCCCTTCCCTCGTGT
ATGGTATGATTCATCTATTGTAGCTCTCAGCTGTTGGAAAGAAATGGAGC
TCTGCTCCGTACGAACAGGAGCGGTGCTCTATGATGAAAGGGATACGTGC
CCCCATCGTCAAATGGCGTGAGGCTTATCAACCCCTTCCCGACGATCTAC
TCCCTTTGGTGGTCCGTCACGAAACGGCTGCATGCTCAAGGCTTACATGA
TACACACAGACCTTCAAGTGATGCCCCCCCCCCTCCCTCGTCGCGTCCCC
CTTCCCCCCCTTCTCGAGAAAAGGTAGTGATCCGCCGTCTTCCCCACCAG
ATGAAAGAGGAGGAGTTCGTCACGGCGCTGGTGGCGGCGACCGCGGATGC
GGGGATGGGGGAGCGGGGAGGATCTTGGGACCTCATGTACTTCACACCGG
GAAAAATGAGCAAGAAGAGAGGGAGGGTGAGAGTTTTTCCTACTCATTTT
TTGCAGCATGTACACCGCATACGAGTAGTATAGTCACAGAGTAGCACCGG
GTGCGGGGTGCGGGATGCACAACGAGGTCAGGGCTCCAGTGGACCGGTCT
ACAGGCTCCGGGGCCGCATGTAGGGGAGCGAGTCGCTAATCCAGCGCCAT
GCGGGAGCCCGTCTCGCAGCTCTCACCACCCGAGAAGACCCGCGTCAGGT
CTACTTGAGCCTCGGCCCCCGCTGCCCCCGCCACGCAGCATGGTTATCTT
AATGGTTCATTATATGTTTTTAAAAAACTGGGTCGTGGTCGAGGGTGCTG
GCGTCCATCCAGATGGAGCCTGTTTAAATGTCGAACAGTTCTCTGGACAG
TTCACGCAGGGAACAACAGTTCACAGAGCAACCGAAACATTTCTTAGTCC
ATGTACGTGTCTGATTTCTTACACCTTAGCCCCGCCCCCCCGAATACCAT
TGACAGAGACAGCAGCATATACGATAGTGGTGAAAAAAAAAATTGTCCTT
ATTATTCGTACACCAACGGAAGAAGATTGTCAAAAGCTGGAAGGAAGAAC
AGTAGTATGGGAAAGGGGGCCGAAGAAGGATGTGCTCAATTCTAAAAACG
AAGTGTAACAAACAAATCCTTAATGGAAATCTATCTGATACCATCGGGGC
TTTTTTTTATCGCCAGTGCAAAAGTACGCCAACAGTACAAAGTATGTCTC
ATTTACAAGCGGTCTATATCGAATACACTAATGGTATGGTTTTGATCATT
TTTTGATACTACATTTAGCACGAAGTGTTTAAAACGTGAAAAAATATACC
GGTATGTATCTAGTGGAATCCCTCCTCCGCGCCCAACCCACGATATATAT
ATTTTTTGTATTTTCCACGTCCTCTTCCTACCAATTTTTTTTTACTCCTC
CACGCTGCTGTCGCCTGCAGATAAGAAGACGTCGGCAACATCGACTCTTC
ATGTCCTCCACAATGCATCACTTCATTTTTTCTCTTAACCCGCCCCCTGT
AGAAACTGCTGTGCTCTCATCAACCCATGCCGGAGGGGAATCTTATGATA
TTTATCTAGATGTATGTGTGTTTTGTACACGTTGATCTTAACACTCAGTA
ATTTTTGCTACATATACTTTTGTGTTTGCATCATCGCCAACAAACAGGTG
ACGGGAACGGCGTACCTGCACATCGACCGTGGGCGTGGGGCAAGCGCGGA
CCTGGGTCTGATAAATCTTAGGGCCGCAGTTTTGGCGTCCGACGCTCTGA
CGCCGTCGACGGGGCCGGTATCCGCCGCCTCCTCCACCTCCAAAGACAGA
GACGGAGGCGGCAAGCAGAGCGGTGACACGAGCAACACCTCGGCGCCAAC
GGCGGCGGTGCCGGCGGCGGCGGGGCCCACAGTTGAGGCGGCTCCGTTTC
AAAAGGTGATACAAAACGTGTCTTTTTGTGCACTGTTTTTATTTACTGCT
GTTATTGCTGATGGCGATGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TCTGCCGATAAATCGTCGGAAACTCGGGTTAACCGTGGGAGATGCATTGC
GACAGCGAAAGGTGTTACTTCAAAGCATCTGATTTGATCGGTTCTGGTGG
CGGTTGCTTGTTGTGGTGCTTCCGCCCTGTGGAAGGGCAAGCCGCCGTCC
TGCACAAGCGCACGAGCGCACAAGAGCAGCACTCCAGTGTGACCAAAAAG
TGGCTCAGTACTTTCGTAGCGTACCCGCGCGAGACTCGAATTCACGAGGC
TGTATACCAAGTCATACCATGATAACCCCGCACACACTTGCTTACAGTAC
TTGGCCGTTGGGAAGGGGTAGAGCTTTGTGCTGCAGGCTCAAATATGCTT
CTTGCGCCGCTTCGACGCGCAAGTAGCCGTAGTCCAGCGCGCGAAGGTAC
GCCCACGGCCACCTTTCCACAGCCTTCAACAACAACGAAAAAAAGACGTC
GGTGAATCTCCTTGACGCCCGTGCCTCGCTCCACACTCCCGACGCCGCTA
ATCTGAATCCCGGCCTGATAGCTCTTCAAGCAGAAGCCCAAGCGGGATAT
TCGCGTGGGAACAATCGAGAAGGATGCGGACTATAAAGCCTTCTGTACCG
CGCTGCAGTCGTCGGCTCTACCCCTGCCCAGCGCGGACGTACAGGCAGAC
ATCAAAGAATCGGAGGGCAAGGAGGAGCCCAAGCCGCAGAACGCGTTGCT
CGATTTCCTGAAAGAGCGAGGCGCGAAGAGGGTGCGAGACAGCCAACGCG
CGGCGGCGCTCGGTTCTTCTGCTCACCGCGGAAGTGGCAGTAGTCGAAGG
GTTTCGAGTTCGTCGTTGGGCGGCGGCGCGGGATCAGCAACGACGGCAGC
GGCGGCGAAGACCCCAGTGTCGGCATCTCGAGCAACGTCAACGACGCCGG
CGGTGGCGCCATCTTTGGTGTCGACCACAAGAAACGTACCCTCCTCCTCC
TCAAGCTCAGGCGCAGCTGCTTCGTCTTCGTCCTCGTCTTCACGACCGCC
GCCGTCGCCTTCTCCCTCGCCACAAAAGAGCCAAAAGACATCCGCGATCG
GAACGGGAGTCAGCGTGATGTCAGCGTCGTATCGAGCGACGCTGGCGAAG
GCGGCGGCGGCGGCGAAGACGACAACACCGACGCCTGCCGAACAACAAGG
GCCCTCAGAAGCATCTAAAAGCCGCTCCAGTTCCACAAAGGGCGGAGGCG
GCAGCGGTGGTGGAAGTGGTAGCCGAGCAGCGAGCAGAGGCGAGAAAATC
GCTGTCTCGGCTGCGGCACCAACACCGACGCCGCGAATACTGTCGAGAAC
GGTCGACTCGAGAAGTAAGCCTGCTGCTGCTGCTGCTGCTGCTTTGTCGG
CGACGGCAGCTGCTTCCTCGGCTCGTAGGCCGACTGCTAGCGCCACCCCG
TCCTCGCGAAGCGGTAATAGTTCGGGCGGCAGTGGAGACGGCGGAAAACG
TGGTGCTAGCGGCGGCAAATCACGGACTGTCGGGAAGCCTTCCGGCACCA
CAAGCAGGCCGAAAAAGTAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig132:140728..146897+

>mRNA_P-littoralis_Contig132.39.1 ID=mRNA_P-littoralis_Contig132.39.1|Name=mRNA_P-littoralis_Contig132.39.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1560bp|location=Sequence derived from alignment at P-littoralis_Contig132:140728..146897+ (Pylaiella littoralis U1_48)
CCAGACAGCACCCAACACAAACCAAACAGAGAAAGATCTCCGGAGCAGGG
GAGGGAGGAGAAGAGAGCAGAGACAGGGAAGGGCCATCGAAGGGAGAAAC
GCGCTACCTACAGCAGCTGCTGCTGCGGTGCGTGGACCATGGCGAGCAGT
GAATCGAAGAACAGCACCAAGCCGGCTTCGAAAGCGAAGACCTCGAGGTC
TTCTCCTTCTCTCCTCAAGGTAGTGATCCGCCGTCTTCCCCACCAGATGA
AAGAGGAGGAGTTCGTCACGGCGCTGGTGGCGGCGACCGCGGATGCGGGG
ATGGGGGAGCGGGGAGGATCTTGGGACCTCATGTACTTCACACCGGGAAA
AATGAGCAAGAAGAGAGGGAGGGTGACGGGAACGGCGTACCTGCACATCG
ACCGTGGGCGTGGGGCAAGCGCGGACCTGGGTCTGATAAATCTTAGGGCC
GCAGTTTTGGCGTCCGACGCTCTGACGCCGTCGACGGGGCCGGTATCCGC
CGCCTCCTCCACCTCCAAAGACAGAGACGGAGGCGGCAAGCAGAGCGGTG
ACACGAGCAACACCTCGGCGCCAACGGCGGCGGTGCCGGCGGCGGCGGGG
CCCACAGTTGAGGCGGCTCCGTTTCAAAAGCTCTTCAAGCAGAAGCCCAA
GCGGGATATTCGCGTGGGAACAATCGAGAAGGATGCGGACTATAAAGCCT
TCTGTACCGCGCTGCAGTCGTCGGCTCTACCCCTGCCCAGCGCGGACGTA
CAGGCAGACATCAAAGAATCGGAGGGCAAGGAGGAGCCCAAGCCGCAGAA
CGCGTTGCTCGATTTCCTGAAAGAGCGAGGCGCGAAGAGGGTGCGAGACA
GCCAACGCGCGGCGGCGCTCGGTTCTTCTGCTCACCGCGGAAGTGGCAGT
AGTCGAAGGGTTTCGAGTTCGTCGTTGGGCGGCGGCGCGGGATCAGCAAC
GACGGCAGCGGCGGCGAAGACCCCAGTGTCGGCATCTCGAGCAACCTCAG
GCGCAGCTGCTTCGTCTTCGTCCTCGTCTTCACGACCGCCGCCGTCGCCT
TCTCCCTCGCCACAAAAGAGCCAAAAGACATCCGCGATCGGAACGGGAGT
CAGCGTGATGTCAGCGTCGTATCGAGCGACGCTGGCGAAGGCGGCGGCGG
CGGCGAAGACGACAACACCGACGCCTGCCGAACAACAAGGGCCCTCAGAA
GCATCTAAAAGCCGCTCCAGTTCCACAAAGGGCGGAGGCGGCAGCGGTGG
TGGAAGTGGTAGCCGAGCAGCGAGCAGAGGCGAGAAAATCGCTGTCTCGG
CTGCGGCACCAACACCGACGCCGCGAATACTGTCGAGAACGGTCGACTCG
AGAAGTAAGCCTGCTGCTGCTGCTGCTGCTGCTTTGTCGGCGACGGCAGC
TGCTTCCTCGGCTCGTAGGCCGACTGCTAGCGCCACCCCGTCCTCGCGAA
GCGGTAATAGTTCGGGCGGCAGTGGAGACGGCGGAAAACGTGGTGCTAGC
GGCGGCAAATCACGGACTGTCGGGAAGCCTTCCGGCACCACAAGCAGGCC
GAAAAAGTAG
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