prot_P-littoralis_Contig132.35.4 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig132.35.4 vs. uniprot
Match: A0A6H5J8H1_9PHAE (Structure-specific endonuclease subunit SLX4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8H1_9PHAE) HSP 1 Score: 289 bits (740), Expect = 3.310e-75 Identity = 509/1464 (34.77%), Postives = 593/1464 (40.51%), Query Frame = 0
Query: 492 LAKEPKTEYQEHIQMAKALSKSLVVPTTRXXXXXXXXXXXXXXXXQETDEELMRNPAAFRAKENRLVRALKDLDVKLERLNKERDAALRKLAAHRTLGARVSARAGGVSGEDS---CSGGPKTAEEVAKIVFPDEH------AGSGGGGGLP-RVTTTN-GPSTRSQARRPPAEKETXXXXXXXXXXXXXXXXXXXRGVPLDTAR--------RRKRHPEGQGCDSAFEGP--DGGAER-----------LIASARGGVPVSAEKDVRGGVDGDADGNRYRESGNDDVGDDHDAGXXXXXXXXXXXXXXXXXXCFGDGNRQSVSSARGSGKGKGGNTFWGIAKGADELSQSNFVTGVFADIRAKAKAKSTAATASSVAGRVKTHDAGRSGGRAVAAVTAAAYGDASLYNRRTRSTARPVAAASLPSSSDLGRGQGDADARSASAXXPXXXXXXXDEGVDRRRHENGSSSVKGTGSFDXXXXXXXXXXXXXDAIGAVDGAILLLSQTLSAGH-------QPCSTSTAREDEDGEEAEGDSETAGVADRHIARAPVAALSGLFPDWKENIRFVFQQGSADLREALQSIDTALSVEEAAFAAAA---------AADDRG-------CVLDGERGREEGVLVV-----------RGSERRPSGSNGGRS-SGGSKVEALLFFKSVIVDALELKGPVQEPSRNTRPPSTKEVEHEXXXXXXXXXXXXKSISSSCDSLQ------SEKNMRNGSSSCVIRCSGDSGGKAVGGPYPCSGTSSPRG---PGHAEERKQVEEDAERRRQEGTGSGADSQGGDARHAEDRVAEVRPP--------DCPTGEDSSSSRYPHEDAVVNVRSEDXXXXXXXXXXXXXXFAIVTNGAGEGXXXXXXXXXXXPNGGXXXXXXXXXXXXXXXXVVTL-----------------SNEDEVDKIGTDADGSDEYTMEAGDDFVDDHCCPWDGVDDDDNGVSMFPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRSSALPPSEIHRTDAXXXXXXXXXXXGKASCGGASGMSTALLDLTQIALSASPXXXXXXLHLSRNGHFDDGGLAAVAAGHILSLH-GXXXXXXXXXXXXXTASSLEENEREEEGRGKRTRVGAGTEVGRGGTGCEDGVPEGMPSFGQMTLQELAGSMAAYGLKKKSKREMTARLEQIWKALHPAMV---VPAAAXXXXXXXLDAE--------RDASPTARVGDSNASSRSLSVSSNG--RSRGAXXXXXXXXXXXXXAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXATASTGLRGLTPLARPPRGSGRCCLLRKGVSQKTVGGAAXXXXXXXXXXXXXVPPLPSSSSLPSCRQQQERSVGGKCVGDEGLA--LGERIRAVITGFAPLHEDVLLLRTVELTATQVLLKDAGVKCSKKDLASYLDARGITFVDRGA---KRRGGGRE 1835
+AK PKTEYQEH+QMA+ALSKSLV P + +EL RNPAAFRAKE RLV LKDLDVKLERL K+RD+ALRKLAAHRTLGAR+SA AGGV E S G PKTAEEV I+F DEH AG G G P RV+T+ R+Q R + G D A RR R +G + P DG + +A ARG P S + G G GDD XXXXX G+G R S GS + + G T W IA+GADELSQS+FVTGVFADIRA ST G+ GR AAVTAAAYGDA LYNRR S+A AA+ SS L QGD D P ENG S G AVD I LLSQTLS A RHIARAPV++LSGLFP+WKEN+ FVF+QG+A+L+EALQ I TALS EE A A A + RG L ER R++G RGSE G NGG + + GS SV L+GP + S ++ E + S++ L+ +E N + + V GD+G ++VG +P G SS G + V D S S GD + P G D R R+ XXXXXXXXXXXXX XXXXXX G XXXXXXV S ++ + G D DEY +E F D C W D+N +S PS XXXXXXXXXXXXXXXX D K S S M LLDLTQ+A SP L R D A G S H G T SS EEG T VG ++ + E MPSFGQMTLQELAG MA YGLKKKSKREMT RLE IWK LHPA + AA XXX RDA GD +A LS SS G RSRGA T+S XXXXXXXXXXXXX + G G+ LGERIR+VI G+APLHED+LLL+TV+L+A L+K+AGVKC+KKDLASYLD+RGITF+DRG + RGG RE
Sbjct: 301 VAKTPKTEYQEHMQMARALSKSLVAPKATAVQDEASE--------EVCTKELARNPAAFRAKERRLVGVLKDLDVKLERLKKDRDSALRKLAAHRTLGARLSAGAGGVPSESSGXXXXGAPKTAEEVVDIIFADEHGAAAAAAGIGSGARTPLRVSTSRLSEEGRAQQRGATLLSSSPSSSSPVSLLSKGTAVADAAGGGSDAASGERPTTVPRRSRRERAKGTPAPLPAPEEDGASXXXXXXXXXXXXXFVAGARG-TPPSGDNPRYDGDKG-------------CWGDDXXXXXXXXXGVGRLIRRRSGGGANGNGQR-STPGGDGS-RARRGRTLWAIAQGADELSQSDFVTGVFADIRAN----STGGVGGGAGGKPHAAKPGRR-----AAVTAAAYGDARLYNRRVVSSA---AASPSALSSTLCSDQGDTD-EGMGGGRPGKSEREQSASQLNPSDENGGSGXDGDD--------------------AVDDVIQLLSQTLSQASVSGXXXXXXXXXXXXXXXXXXXXXXXXXXAERFAARHIARAPVSSLSGLFPNWKENVGFVFRQGAAELQEALQGIVTALSEEEEKEAEALVFFEGVILEALEARGPACSRQLAFLGEERRRDDGSHSPGFEVGSPQTWRRGSEGVGIGRNGGGAVTPGSDSPPRGGANSVQDSGFALEGPEERGSERYDGGGSENGEGQARVDGESGDHL--SVADEATGLEETHATTAENNGHDAEPAAVGTDDGDAGTQSVG--HPHHGDSSVEAIVLSGDSTASAVVTFDLT----SSESSKRCSSAGDIXXXXXXXXXXXXXXXXAAGLAEFPVGADGGG-RNSGRGVTARARNGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRKSHRGVTASVRNCQRKXXXXXXVXXXXXXXXXXXXXXGANGPDSTDERGEASGDSDDVVDEYALEDEYGFDDHDYCAW----GDENDLSFVPSPDIDGVADERQPXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAD-------------KVSHDSTSAMGAELLDLTQVAPLPSPS-------LRRCRESLDAAAATSPIGRGRSQHRGLESPATARRRHHCTPSSPPVEG--EEGASSPTAVGGNEDIAE--------LREVMPSFGQMTLQELAGMMAVYGLKKKSKREMTERLEHIWKTLHPAAAEEGMSAAGDGNAXXXXXXXXXXXXXXXRDAPSRDSGGDPSAY---LSASSQGHRRSRGAAEARP---------------------------------------TSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFLAENSSGRNGVDADLGERIRSVIMGYAPLHEDILLLKTVDLSAIHTLIKNAGVKCTKKDLASYLDSRGITFIDRGGVKRRARGGERE 1622
BLAST of mRNA_P-littoralis_Contig132.35.4 vs. uniprot
Match: D8LCH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH0_ECTSI) HSP 1 Score: 186 bits (473), Expect = 7.310e-44 Identity = 242/666 (36.34%), Postives = 277/666 (41.59%), Query Frame = 0
Query: 460 SSAVGGGGGVSERG--LGGAGSLGGAPLDRRAPALAKEPKTEYQEHIQMAKALSKSLVVPTTRXXXXXXXXXXXXXXXXQETDEELMRNPAAFRAKENRLVRALKDLDVKLERLNKERDAALRKLAAHRTLGARVSARAGGVSGEDSCSGGPKTAEEVAKIVFPDEHAGSGGGGGLPRVTTTNGPSTRSQARRPPAEKETXXXXXXXXXXXXXXXXXXXRGVPLDTARRRKRHPEGQGCDSAFEGPDGGAERLIASAR-GGVPVSAEKDVRGGVDGDADGNRYRESGNDDVGDDHDAGXXXXXXXXXXXXXXXXXXCFGDGNRQSVSSARGSGKGKGGNTFWGIAKGADELSQSNFVTGVFADIRAKAKAKSTAATASSVAGRVKTHDAGRSGGRAVAAVTAAAYGDASLYNRRTRSTARPVAAASLPSSSDLGRGQGDADARSASAXXPXXXXXXXDEGVDRRRHE----NGSSSVKGTGSFDXXXXXXXXXXXXXDAIGAVDGAILLLSQTLSAGHQPCSTSTAREDEDGEEAEG---DSETAGVADRHIARAPVAALSGLFPDWKENIRFVFQQGSADLREALQSIDTALSVEEAAFAAAAAADDRGCVLDGERGREEGVLVVRGSERRPSGSNGGRSSGGSKVEALLFFKSVIVDALELKGP 1115
SSAVGGGG S RG G GS G R + +AK PKTEYQEH+QMA+ALSKSLV P + ++EEL RNPAAFRAKE RLV LKDLDVKLERL K+RD+ALRK R R XXXXXXXXXXXXXXXXXXX RL GG + ++ GG DG+R R G T W IA+GADELSQSNFVTGVFADI KA S + G+ + GR AAVTAAAYGDA LYNRR S+A A+A L S+ RG DA RSA A G R N S G G D AVD AI LLSQTLS TA + G+E G + E A RHIARAPV+ALSGLFP+WKEN+ FVF+QG+A+LR ALQ I ALS G E RPSG R S K EAL+FF+ V+++ALEL+GP
Sbjct: 5 SSAVGGGG-ASARGEEAGARGSGDGLSARRSSTEVAKTPKTEYQEHMQMARALSKSLVAPKATAVQD------------EASEEELARNPAAFRAKERRLVGVLKDLDVKLERLKKDRDSALRKRGTQRE-------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLXXXXXXGGANDNGQRSTPGG-----DGSRVRR----------------------------------------------------GRTLWAIAQGADELSQSNFVTGVFADI----KANSIGSVGGGAGGKPQAAKPGRR-----AAVTAAAYGDARLYNRRVGSSAAASASA-LSSTLCSNRGGIDAATRSADAADTDKGMGGGRPGKSEREQSVSQLNPSDENGGGGG---------------DGNDAVDDAIQLLSQTLSQASVSGRGGTASAQDGGQENSGKKQEEEAERSAARHIARAPVSALSGLFPNWKENVIFVFRQGAAELRLALQGIVAALSE-----------XXXXXXXXXXXXXXXXXXXXAGPEGRPSGVR--RRS--RKAEALVFFEGVVLEALELRGP 553 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig132.35.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig132.35.4 ID=prot_P-littoralis_Contig132.35.4|Name=mRNA_P-littoralis_Contig132.35.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1863bpback to top |