prot_P-littoralis_Contig132.32.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig132.32.2
Unique Nameprot_P-littoralis_Contig132.32.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length122
Homology
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BLAST of mRNA_P-littoralis_Contig132.32.2 vs. uniprot
Match: D8LCH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCH1_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 2.190e-18
Identity = 36/49 (73.47%), Postives = 43/49 (87.76%), Query Frame = 0 
Query:    6 MESECRVFAAESFKCLESYGTNRAKAKDECAPFFDSYKDCLKRESDAAK 54
            MESECR FAAESFKC+ES+GT+R KAK+ C PFF+ YK+CL+RESDA K
Sbjct:    1 MESECREFAAESFKCMESFGTDREKAKNACGPFFERYKECLQRESDALK 49
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig132.32.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCH1_ECTSI2.190e-1873.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51808CHCHcoord: 7..53
score: 10.645723

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig132contigP-littoralis_Contig132:124073..128984 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig132.32.2mRNA_P-littoralis_Contig132.32.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig132 124036..130024 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig132.32.2 ID=prot_P-littoralis_Contig132.32.2|Name=mRNA_P-littoralis_Contig132.32.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=122bp
MTASKMESECRVFAAESFKCLESYGTNRAKAKDECAPFFDSYKDCLKRES
DAAKNFFIFRYSPARERGEGGGGGLSNLSPCWCVVDRPRNIDEGGGEQAR
HWFAWQMRHHNVYRAVCILRV*
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