prot_P-littoralis_Contig132.29.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig132.29.1
Unique Nameprot_P-littoralis_Contig132.29.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length551
Homology
BLAST of mRNA_P-littoralis_Contig132.29.1 vs. uniprot
Match: A0A6H5JFN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFN0_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 9.500e-86
Identity = 240/546 (43.96%), Postives = 274/546 (50.18%), Query Frame = 0
Query:    1 MEDRALSLPRAEPLLRLPISAIVEFVSNRSEAEVLLRIGDLAHEFDHLTASLVQWLEHQQYLKVDS---QKQPPTNDPGQSLISSLAPLTHQARVANRHGVKILQQRITECLQQLQRLT--------------DAVQVFADQNASFSQELRICGLEGRAEQRRRLADTESALASRLSKFLGGCDSFYDEQALLLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVAAAPVSALAAP----AGATAPREQPQQHIRPKVGRVHLARDPEKTIGSNGTSTEGFTGHKRPRRPSGSGVEASSQNHDAGIGKASPVRRDKCCKQQQQQQLSQGENDYNDGDDVDGFAAPSFLTPPVAGAVPAGASSSGGGAVRDTTSGLH--AAVGF---IATPHSACSSLGSTPSNGSSSPAIAVTSPLPVPKPLRRKSLDKARRGGTAGAGPATIAAATRATSFGIVSSSRMNNRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPLSEDQLH-SSGYSSPTPPSTREPSPPPLLSTQEGSVSAAEGDEN 519
            MEDRAL LPRAEPLL +P+SAIVEFVSNRSEAEVLLRIGDL HEFDHLT +LVQWLEH+Q+L  D    ++Q P  D G+SL+ SL PL HQARV NRHGV++LQQ+ITECLQQLQR                DAVQVFADQNASFSQELR+CGL  RAEQRRRLA+TESALA RL+KFLGGCDSFYDEQ L L                               + A AP  A A      A A APRE     +     +     + E                   RR  G      ++  +    + +     K         LSQ   D    D       P FLTPPV                          A+VG    +  P SACSS GSTPS+ S SPA+   SPLP PK     SL   R  G    GP  I+A   A   G  SSSR   R                                  +APLSE+Q + S G  SPTPPSTREPSPPPL STQEGSV++A  D N
Sbjct:   21 MEDRALRLPRAEPLLHVPVSAIVEFVSNRSEAEVLLRIGDLGHEFDHLTRTLVQWLEHEQHLTADGCLQEEQQPAEDTGESLVLSLVPLAHQARVVNRHGVRVLQQKITECLQQLQRYMVGVVQGDGFGKWTMDAVQVFADQNASFSQELRLCGLGDRAEQRRRLAETESALARRLAKFLGGCDSFYDEQPLPLAMQFAAAEEAAA-------------------WTAVAPAEADAVAFKQAAPAVAPREGAAASLPVAAPQEKEEEEEEXXXXXXXXXXXXXXXXXXRRRNRGRRSATPARGRENLARRTATTMNRKATSAA----LSQDVEDRLHND-------PPFLTPPVXXXXXXXXXXXXXXXXXXXXXXXXXXASVGPRGPLVAPLSACSSSGSTPSSASMSPALVGPSPLPTPK-----SLVMRREEG----GPGAISAGATAAFRGC-SSSRKRAR--------VGGSGAGFAEATPALASTAAALGADGSAPLSEEQPNLSPGSLSPTPPSTREPSPPPL-STQEGSVASAATDGN 517          
BLAST of mRNA_P-littoralis_Contig132.29.1 vs. uniprot
Match: D8LCH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH2_ECTSI)

HSP 1 Score: 264 bits (675), Expect = 5.470e-78
Identity = 136/180 (75.56%), Postives = 154/180 (85.56%), Query Frame = 0
Query:    1 MEDRALSLPRAEPLLRLPISAIVEFVSNRSEAEVLLRIGDLAHEFDHLTASLVQWLEHQQYLKVDS---QKQPPTNDPGQSLISSLAPLTHQARVANRHGVKILQQRITECLQQLQRLTDAVQVFADQNASFSQELRICGLEGRAEQRRRLADTESALASRLSKFLGGCDSFYDEQALLL 177
            ME+RAL LPRAEPLL +P+SAIVEFVSNRSEAEVLLRIGDL HEFDHLT +LVQWLEH+Q+L  D    ++Q P  D G+SL+ SL PL HQARV NRHGV++LQ++ITECLQQLQR  DAVQVFA+QNASFSQELR+CGL  RAEQRRRLA+TESAL  RL+KFLGGCDSFYDEQ L L
Sbjct:    1 MENRALRLPRAEPLLHVPVSAIVEFVSNRSEAEVLLRIGDLGHEFDHLTRTLVQWLEHEQHLTADGCLQEEQQPVEDSGESLVLSLVPLAHQARVVNRHGVRVLQEKITECLQQLQRYMDAVQVFANQNASFSQELRLCGLGDRAEQRRRLAETESALVRRLAKFLGGCDSFYDEQPLPL 180          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig132.29.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JFN0_9PHAE9.500e-8643.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCH2_ECTSI5.470e-7875.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 98..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..327
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..388
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 518..551
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..418
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..248
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..313
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 472..551

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig132contigP-littoralis_Contig132:116737..123775 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig132.29.1mRNA_P-littoralis_Contig132.29.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig132 116737..123885 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig132.29.1 ID=prot_P-littoralis_Contig132.29.1|Name=mRNA_P-littoralis_Contig132.29.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=551bp
MEDRALSLPRAEPLLRLPISAIVEFVSNRSEAEVLLRIGDLAHEFDHLTA
SLVQWLEHQQYLKVDSQKQPPTNDPGQSLISSLAPLTHQARVANRHGVKI
LQQRITECLQQLQRLTDAVQVFADQNASFSQELRICGLEGRAEQRRRLAD
TESALASRLSKFLGGCDSFYDEQALLLVAGTTSGAVATVVASAASALKPA
AAAAAAASFVAAAPVSALAAPAGATAPREQPQQHIRPKVGRVHLARDPEK
TIGSNGTSTEGFTGHKRPRRPSGSGVEASSQNHDAGIGKASPVRRDKCCK
QQQQQQLSQGENDYNDGDDVDGFAAPSFLTPPVAGAVPAGASSSGGGAVR
DTTSGLHAAVGFIATPHSACSSLGSTPSNGSSSPAIAVTSPLPVPKPLRR
KSLDKARRGGTAGAGPATIAAATRATSFGIVSSSRMNNRRARAGGGGGCG
SGADVSEATTTSATAAAAAAAAPAAPLSEDQLHSSGYSSPTPPSTREPSP
PPLLSTQEGSVSAAEGDENEDGSGHREVVWANRVVDRGGDDNDGRVMEHE
G
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