prot_P-littoralis_Contig1311.8.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1311.8.1
Unique Nameprot_P-littoralis_Contig1311.8.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length101
Homology
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BLAST of mRNA_P-littoralis_Contig1311.8.1 vs. uniprot
Match: A0A6H5JVK0_9PHAE (GBP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVK0_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.160e-10
Identity = 44/65 (67.69%), Postives = 46/65 (70.77%), Query Frame = 0 
Query:   12 RQAHLRQQEEEAEMLWNESRR--GRDRRRRGYS-SSHVRYD---TLSPPPTRWDHTLSPPHDRRT 70
            RQA LRQQEEEA+M W E+ R  GR R RRGYS SS  RY    TLSPPPTRW HTLSPP D  T
Sbjct:  529 RQACLRQQEEEAQMWWEEAHRERGRGRGRRGYSPSSRARYGYDHTLSPPPTRW-HTLSPPRDHGT 592
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1311.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JVK0_9PHAE1.160e-1067.69GBP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1311contigP-littoralis_Contig1311:15496..16290 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1311.8.1mRNA_P-littoralis_Contig1311.8.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1311 15496..16290 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1311.8.1 ID=prot_P-littoralis_Contig1311.8.1|Name=mRNA_P-littoralis_Contig1311.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=101bp
EILKERERHTSRQAHLRQQEEEAEMLWNESRRGRDRRRRGYSSSHVRYDT
LSPPPTRWDHTLSPPHDRRTRYDDTLSPPRDRITRYDDTLSPPRDHRTRC
D
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