prot_P-littoralis_Contig1311.6.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1311.6.1
Unique Nameprot_P-littoralis_Contig1311.6.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length170
Homology
BLAST of mRNA_P-littoralis_Contig1311.6.1 vs. uniprot
Match: A0A6H5JVK0_9PHAE (GBP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVK0_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 2.580e-33
Identity = 74/121 (61.16%), Postives = 85/121 (70.25%), Query Frame = 0
Query:   57 AAAAPRSRPARDVDMGPIMNQEHAERKAREYIADHPDQEWTGHWKTTSRGVASLINVRG-------SRPTRDVDVGPIRNQEHAERKAREYIVEHRDQEWTGHWKTTSRG-TSVTGVRDNA 169
            AA A  SR   DV++GPI +Q  AER+ARE+IA+HPDQEWTG W TTS G AS+I VR        SR T DV+VGPI +Q  AER+ARE+I EH DQEWTG W TTS G  SV GVRD A
Sbjct:  668 AAVATPSRRTHDVNVGPIWDQADAERRAREFIAEHPDQEWTGQWTTTSEGKASVIGVRDKAAAATRSRRTHDVNVGPIWDQADAERRAREFIAEHPDQEWTGQWTTTSEGKASVIGVRDKA 788          
BLAST of mRNA_P-littoralis_Contig1311.6.1 vs. uniprot
Match: A0A6H5JPS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPS5_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 1.150e-19
Identity = 53/105 (50.48%), Postives = 62/105 (59.05%), Query Frame = 0
Query:   63 SRPARDVDMGPIMNQEHAERKAREYIADHPDQEWTGHWKTTSRGVASLINVRGSRPT--------RDVDVGPIRNQEHAERKAREYIVEHRDQEWTGHWKTTSRG 159
            S  ARDV++GPI N   A  KA+ YI  HP  +WTGHW TT  GV S INVR             R+VD+GPI NQ+ A  KAR +I E+   EWTGHW TT  G
Sbjct:  136 SAHARDVEIGPIWNHGDANTKAKAYIDKHPWLKWTGHWSTTVPGVMSTINVRNLTSLEGFVRGEHRNVDMGPIWNQQDAVNKARAFIEEYPFLEWTGHWNTTEIG 240          
BLAST of mRNA_P-littoralis_Contig1311.6.1 vs. uniprot
Match: A0A6H5K385_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K385_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 5.410e-18
Identity = 42/57 (73.68%), Postives = 48/57 (84.21%), Query Frame = 0
Query:   58 AAAPRSRPARDVDMGPIMNQEHAERKAREYIADHPDQEWTGHWKTTSRGVASLINVR 114
            A A R RP RDVD+GPI++Q+HAERKAREYIA+HPD EWTGHW TTS G AS+I VR
Sbjct:  394 ATATRRRPTRDVDVGPILSQDHAERKAREYIAEHPDLEWTGHWTTTSVGRASVIGVR 450          
BLAST of mRNA_P-littoralis_Contig1311.6.1 vs. uniprot
Match: UPI000EF49D9A (mannan-binding lectin n=1 Tax=Tropicibacter sp. LMIT003 TaxID=2267683 RepID=UPI000EF49D9A)

HSP 1 Score: 60.8 bits (146), Expect = 6.840e-9
Identity = 42/107 (39.25%), Postives = 60/107 (56.07%), Query Frame = 0
Query:   53 SSIAAAAAPRSRPARDVDMGPIMNQEHAERKAREYIADHPDQEWTGHWKTTSRGVASLINVRGSRPTRDVDVGPIRNQEHAERKAREYIVEHRDQEWTGHWKTTSRG 159
            +++A +AA     AR ++ GPI NQ+ A+ K    IA H   +WTG W TT +G  S+  +    P + V+VGPI NQ+ A+RK        R + WTG W TT +G
Sbjct:    9 TALAFSAAAVPAQARSIEAGPIWNQQDAQVKCPA-IAAHWKGKWTGQWWTTVQGKMSVCQIVKI-PKKAVEVGPIWNQQDAQRKCPAIAGAERAK-WTGQWWTTVQG 112          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1311.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JVK0_9PHAE2.580e-3361.16GBP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPS5_9PHAE1.150e-1950.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K385_9PHAE5.410e-1873.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000EF49D9A6.840e-939.25mannan-binding lectin n=1 Tax=Tropicibacter sp. LM... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1490.230coord: 116..166
e-value: 1.3E-9
score: 39.4
coord: 62..115
e-value: 1.2E-11
score: 46.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1311contigP-littoralis_Contig1311:6873..15502 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1311.6.1mRNA_P-littoralis_Contig1311.6.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1311 6268..16291 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1311.6.1 ID=prot_P-littoralis_Contig1311.6.1|Name=mRNA_P-littoralis_Contig1311.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=170bp
MRHVGNMLHLSRLLTMQREGEAAGIFVTITATHPIRHAAITTRPCWCARI
CISSIAAAAAPRSRPARDVDMGPIMNQEHAERKAREYIADHPDQEWTGHW
KTTSRGVASLINVRGSRPTRDVDVGPIRNQEHAERKAREYIVEHRDQEWT
GHWKTTSRGTSVTGVRDNA*
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