mRNA_P-littoralis_Contig131.127.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig131.127.2 vs. uniprot
Match: A0A6H5LCT1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCT1_9PHAE) HSP 1 Score: 206 bits (525), Expect = 1.840e-60 Identity = 126/290 (43.45%), Postives = 168/290 (57.93%), Query Frame = 2
Query: 2 SGKGGGCPVEVKAYKGKGG-WNITGLVDGHTNCSGGMAKGKSTALQGMAADAMRDNPQLTGVALKRELER-TGLKVTDRTATRLKNNAKKAHHAAVAGSYQQLPSLCAQLEKNSPGTVXXXXXXXXXTFKRLFVMLGRAAHACAQSPLKFICVDAGHLKGSWKGQMLLVTCKDANNTLVQVATVICDKEDNSNYV*L-----KNTEMEALLNSPKTTVYTDQHASHGPALAQFAKKCWRRFCLVHLIRNLPAV--KDSNGWVYQAAREPTEQTFMNTM-QLVKASQPAAY 841
+G GGC V+A + + G + +T + H +CSGG K+ AL+G A+DAM NP + G LKR LE+ TGL+V+ A+RLK A +A + Y+ + S C +L K+ PG+V F+ +FVMLGRAAHA +SP+K + +D GHLKG W G ML +TCKDANN + VATVI KED S Y L KN +M LL KTT +TDQH AL A R+CL HLI NL ++N WV+ AAR PT++ + + Q V S+P AY
Sbjct: 44 NGAAGGCQATVRACRQRSGEFKVTFFIPEHNDCSGGKVGAKAAALEGFASDAMVSNPTMKGTDLKRSLEQSTGLRVSYSAASRLKVAATRASKEQLEHGYRIMDSYCKELVKDCPGSVAVVERETTGRFRSVFVMLGRAAHAAVRSPIKVVGMDGGHLKGEWNGMMLTLTCKDANNENIHVATVIGPKEDTSLYKTLLRNCKKNLKMRDLLEDSKTTFFTDQHKGATCALRGEAPLAQHRYCLRHLILNLEEKIGSNANSWVFFAARAPTKKQCEDILKQHVLPSKPRAY 333
BLAST of mRNA_P-littoralis_Contig131.127.2 vs. uniprot
Match: A0A6H5JUM0_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUM0_9PHAE) HSP 1 Score: 197 bits (500), Expect = 8.080e-57 Identity = 123/289 (42.56%), Postives = 165/289 (57.09%), Query Frame = 2
Query: 2 SGKGGGCPVEVKAYKG-KGGWNITGLVDGHTNCSGGMAKGKSTALQGMAADAMRDNPQLTGVALKREL-ERTGLKVTDRTATRLKNNAKKAHHAAVAGSYQQLPSLCAQLEKNSPGTVXXXXXXXXXTFKRLFVMLGRAAHACAQSPLKFICVDAGHLKGSWKGQMLLVTCKDANNTLVQVATVICDKEDNSNYV*L----KNTEMEALLNSPKTTVYTDQHASHGPALAQFAKKCWRRFCLVHLIRNLPAV--KDSNGWVYQAAREPTEQTFMNTM-QLVKASQPAAY 841
+G GGC V+A + G + +T + +CSGG K+ AL+G A+ AM NP + G LKR L + TGL+V+ TA+RLK AK+A + Y+ + S C +L K+ PG V F +FVMLGRAA A +SP+K + +D GHLKG W G ML +TCKDA+N ++ VATVI KED S Y L KN +M LL KTT +TDQH AL + A R+CL HLI NL ++N WV+ AAR PT++ + + Q V S+P AY
Sbjct: 86 NGAAGGCQATVRACRHWSGEFKVTFFIPEQNDCSGGKVGAKAAALEGFASAAMVSNPTMKGTDLKRSLVQGTGLRVSYSTASRLKVAAKRASKEQLEHGYRIMDSYCKELVKDCPGPVAVVQRETTGRFPSVFVMLGRAARAAVRSPVKVVGMDGGHLKGEWNGMMLTLTCKDAHNEMINVATVIGPKEDTSLYKTLLRNCKNPKMRDLLEDSKTTFFTDQHKGATCALRREAPLAQHRYCLRHLILNLEEKIGSNANSWVFFAARAPTKKQCEDILKQHVLPSKPRAY 374
BLAST of mRNA_P-littoralis_Contig131.127.2 vs. uniprot
Match: A0A6H5KMN6_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN6_9PHAE) HSP 1 Score: 164 bits (416), Expect = 9.020e-46 Identity = 99/236 (41.95%), Postives = 131/236 (55.51%), Query Frame = 2
Query: 20 CPVEVKAYKGKGG-WNITGLVDGHTNCSGGMAKGKSTALQGMAADAMRDNPQLTGVALKRELER-TGLKVTDRTATRLKNNAKKAHHAAVAGSYQQLPSLCAQLEKNSPGTVXXXXXXXXXTFKRLFVMLGRAAHACAQSPLKFICVDAGHLKGSWKGQMLLVTCKDANNTLVQVATVICDKEDNSNYV*L-----KNTEMEALLNSPKTTVYTDQHASHGPALAQFAKKCWRRFC 706
C EV+A K + G + +T ++ H +CSGG +S AL+G A+ AM NP + G LKR LE+ TGLKV+ A+RLK A +A + Y+ + S C +L K+ PG++ F+ LF MLGRAA+A +SP+K + +D HLKG W GQML +TCKDANN + VAT I E+ Y L KN +M L KTT YTDQH AL A R C
Sbjct: 50 CLAEVRACKQRSGEFKVTFIIPDHNDCSGGKVGARSAALEGFASAAMVSNPTVKGTDLKRSLEQQTGLKVSYSAASRLKVAATRASKEQLEHGYRIMTSYCKELVKDCPGSIAVVQRETTGRFRSLFFMLGRAAYAAVRSPIKVVGMDGAHLKGKWNGQMLTLTCKDANNENIHVATAIGPVENTDLYKTLIRGCKKNPKMRDFLEDSKTTFYTDQHKGGKCALEGEAPLAQHRNC 285
BLAST of mRNA_P-littoralis_Contig131.127.2 vs. uniprot
Match: A0A6H5JAG6_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG6_9PHAE) HSP 1 Score: 153 bits (386), Expect = 3.110e-40 Identity = 105/287 (36.59%), Postives = 144/287 (50.17%), Query Frame = 2
Query: 2 SGKGGGCPVEVKAYKGK-GGWNITGLVDGHTNCSGGMAKGKSTALQGMAADAMRDNPQLTGVALKRELER-TGLKVTDRTATRLKNNAKKAHHAAVAGSYQQLPSLCAQLEKNSPGTVXXXXXXXXXTFKRLFVMLGRAAHACAQSPLKFICVDAGHLKGSWKGQMLLVTCKDANNTLVQVATVICDKEDNSNYV*L-----KNTEMEALLNSPKTTVYTDQHASHGPALAQFAKKCWRRFCLVHLIRNL---------------PAVKDSNGWVYQAAREPTEQTF 796
+G GGC V+A + + G + +T + H + SGG K+ AL+G A+ AM NP + G LKR LE+ TGL+V+ A+RLK A +A + Y+ + S F+R+ +MLGRAA A +SP+K + D GHLKG W G +L +TCKDANN ++ VATVI KED S Y L KN +M LL KT +TDQH AL A R+CL H+I N+ P DS G Y+A+ P ++
Sbjct: 44 NGAAGGCQATVRACRQRLGEFKVTFFIPEHNDLSGGKVGAKAAALEGFASAAMVSNPTMKGADLKRSLEQSTGLRVSYSAASRLKVAATRASKEQLEHGYRIMDS-----------------------FRRVILMLGRAARAAVRSPMKVVGKDGGHLKGEWNGMVLTLTCKDANNEMIHVATVIGPKEDTSLYKTLLRNCKKNPKMRDLLEDSKTIFFTDQHKGATCALRGEAPLAQHRYCLRHIILNIEKIGSVQAPLLVMHSPMRCDSLGTFYRASLAPMSRSL 307
BLAST of mRNA_P-littoralis_Contig131.127.2 vs. uniprot
Match: A0A6H5KNP1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP1_9PHAE) HSP 1 Score: 137 bits (344), Expect = 5.980e-36 Identity = 77/179 (43.02%), Postives = 101/179 (56.42%), Query Frame = 2
Query: 212 GLKVTDRTATRLKNNAKKAHHAAVAGSYQQLPSLCAQLEKNSPGTVXXXXXXXXXTFKRLFVMLGRAAHACAQSPLKFICVDAGHLKGSWKGQMLLVTCKDANNTLVQVATVICDKEDNSNYV*L-----KNTEMEALLNSPKTTVYTDQHASHGPALAQFAKKCWRRFCLVHLIRNLP 733
G K R+ R K NA A AA AGS QQ P C +L K SPG+V +FKR+ +++ RAA A+ KF+ VD GH+KG+WKG +L+ KD NN LV VA VICDKE+++NY L KN ++A L SP TT+Y+D++ A+ A R C HL N P
Sbjct: 15 GHKADGRSVRRYKKNAVDALQAAAAGSIQQAPGYCRELVKMSPGSVANVERHPDGSFKRIAIVVNRAALVIARGLFKFLQVDGGHMKGTWKGMVLVAAGKDTNNNLVLVAFVICDKENSTNYEFLFSEMKKNVHLKAPLESPLTTIYSDENNGIKSAIEIEASDIIHRLCCKHLANNFP 193
BLAST of mRNA_P-littoralis_Contig131.127.2 vs. uniprot
Match: A0A6H5JC04_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC04_9PHAE) HSP 1 Score: 141 bits (355), Expect = 6.720e-36 Identity = 93/263 (35.36%), Postives = 137/263 (52.09%), Query Frame = 2
Query: 32 VKAYKGKGG-WNITGLVDGHTNCSGGMAKGKSTALQGMAADAMRDNPQLTGVALKRELERTGLKVTDRTATRLKNNAKKAHHAAVAGSYQQLPSLCAQLEKNSPGTVXXXXXXXXXTFKRLFVMLGRAAHACAQSPLKFICVDAGHLKGSWKGQMLLVTCKDANNTLVQVATVICDKEDNSNYV*L-----KNTEMEALLNSPKTTVYTDQHASHGPALAQFAKKCWRRFCLVHLIRNLPAVKDS--NGWVYQAAREPTEQTF 796
VK KGG + IT + H +C+GG + S +Q + +R NP++ G A+KR L+ G V+DR + R K A AG+ +LPSL +E++ PG+V F R F+MLG+AA+ A S + +DAGHLKGSWKG M ++ D+NN ++ V+TV+ DKE+ +NY L +N M LL+S + T + D H AL + R C+ HL + + VY+AA PT+ F
Sbjct: 113 VKGCLQKGGDFKITKVEGSHVDCAGG-GRTSSAVVQPLVDQLVRANPKIAGPAIKRTLKTVGFTVSDRQSQRAKKRIATASKEDEAGAISRLPSLFEGIERDCPGSVATVEVSPDNRFVRSFLMLGKAAYVAAHS---MVAMDAGHLKGSWKGVMYVLCMHDSNNKIIHVSTVLADKENATNYKFLLQQTCRNEHMHRLLSSGEVTFFIDGHKGSPAALRAVLPQAPWRACVRHLTNKIMKAMGHAYSVAVYRAAVMPTKVLF 371
BLAST of mRNA_P-littoralis_Contig131.127.2 vs. uniprot
Match: A0A6H5K832_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K832_9PHAE) HSP 1 Score: 140 bits (354), Expect = 9.590e-36 Identity = 96/262 (36.64%), Postives = 123/262 (46.95%), Query Frame = 2
Query: 173 LTGVALKRELER-TGLKVTDRTATRLKNNAKKAHHAAVAGSYQQLPSLCAQLEKNSPGTVXXXXXXXXXTFKRLFVMLGRAAHACAQSPLKFICVDAGHLKGSWKGQMLLVTCKDANNTLV-----------------------------QVATVICDKEDNSNY-----V*LKNTEMEALLNSPKTTVYTDQHASHGPALAQFAKKCWRRFCLVHLIRNLPAVKDSN--GWVYQAAREPTEQTFMNTMQLVKASQPAAYDA 847
+ G LKR+LER TG+ V RTA R+K A+ A A YQ L S C L++ PG+V + + +CVDAGHLKG W G ML+ T KDA+ LV VAT ICDKE+ NY + N +M +LNSPKTT++TD+H SH PA+ A R+CL H I+ LP W+Y AAR PT FM+T VK ++P AY A
Sbjct: 1 MNGKELKRKLERDTGINVAHRTANRMKMTARDGDKATTAAGYQLLGSFCDLLQQQCPGSV---------------------------AETQVLCVDAGHLKGDWNGMMLVATSKDADTKLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHVATSICDKENTDNYSWFYLMMKNNVDMAEVLNSPKTTLFTDKHKSHEPAITLHAPNTVWRWCLRHHIKALPEAPGQTVTHWLYHAARAPTRTKFMDTK--VKPTKPKAYAA 233
BLAST of mRNA_P-littoralis_Contig131.127.2 vs. uniprot
Match: A0A6H5L9F2_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9F2_9PHAE) HSP 1 Score: 122 bits (307), Expect = 4.670e-28 Identity = 79/223 (35.43%), Postives = 114/223 (51.12%), Query Frame = 2
Query: 200 LERTGLKVTDRTATRLKNNAKKAHHAAVAGSYQQLPSLCAQLEKNSPGTVXXXXXXXXXTFKRLFVMLGRAAHACAQSPLKFICVDAGHLKGSWKGQMLLVTCKDANNTLVQVATVICDKEDNSNYV*L-----KNTEMEALLNSPKTTVYTDQHASHGPALAQFAKKCWRRFCLVHLIRNLPAVKDSNGW---VYQAAREPTEQTFMNTMQLVKASQPAAYD 844
++ G V+DR + R K A AG+ +LPSL +E++ PG+V F R F+MLG+AA+ A S + +DAGHLKGSWKG M ++ D+NN ++ V TV+ DKE+ +NY L +N M LL+S + T D H AL + R C+ HLI N + + VY+AA PT+ F ++ VK PA Y+
Sbjct: 1 MKTVGFTVSDRQSQRAKKRIATASKEDEAGAISRLPSLFEGIERDCPGSVATVEVSPDNRFVRSFLMLGKAAYVAAHS---MVAMDAGHLKGSWKGVMYVLCMHDSNNKIIHVTTVLADKENATNYKFLLQQTCRNEHMHRLLSSGEVTFVIDGHKGSPAALRAVVPQAPWRACVRHLITNKNMKAMGHAYSVAVYRAAVMPTKVLFEEAIEPVKKDFPANYN 220
BLAST of mRNA_P-littoralis_Contig131.127.2 vs. uniprot
Match: A0A6H5K0L7_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L7_9PHAE) HSP 1 Score: 103 bits (256), Expect = 1.890e-21 Identity = 61/127 (48.03%), Postives = 78/127 (61.42%), Query Frame = 2
Query: 491 MLLVTCKDANNTLVQVATVICDKEDNSNY-----V*LKNTEMEALLNSPKTTVYTDQHASHGPALAQFAKKCWRRFCLVHLIRNLPAVKDS--NGWVYQAAREPTEQTFMNTMQL-VKASQPAAYDA 847
ML+ T DA+N L+ VAT ICDKE+ NY + N EM +LNSPKTT++TD+H SH PA+ A K R+CL H+IR LP S G++Y AAR PT + FM+ M VK +P YDA
Sbjct: 2 MLVATGMDADNRLMHVATGICDKENADNYSWFYRMMKNNAEMAKVLNSPKTTLFTDKHLSHEPAIRVHASKPVWRWCLRHVIRRLPEAPGSIVTGFLYHAARAPTLKKFMDIMDSNVKPFKPKVYDA 128
BLAST of mRNA_P-littoralis_Contig131.127.2 vs. uniprot
Match: A0A6H5KCW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW3_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 2.560e-20 Identity = 57/126 (45.24%), Postives = 73/126 (57.94%), Query Frame = 2
Query: 491 MLLVTCKDANNTLVQVATVICDKEDNSNY-----V*LKNTEMEALLNSPKTTVYTDQHASHGPALAQFAKKCWRRFCLVHLIRNLPAVKDSN--GWVYQAAREPTEQTFMNTMQLVKASQPAAYDA 847
ML+ T DA+ LV VAT ICDKE+ NY + N +M +LNSPKTT++TD+H SH PA+ A R+CL H I+ LP W+Y AAR PT FM+T VK ++P AY A
Sbjct: 2 MLVATGTDADTKLVHVATSICDKENTDNYSWFYLMMKNNVDMAEVLNSPKTTLFTDKHKSHEPAITLHAPNTVWRWCLRHHIKALPEAPGQTVTHWLYHAARAPTRTKFMDTK--VKPTKPKAYAA 125 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig131.127.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig131.127.2 >prot_P-littoralis_Contig131.127.2 ID=prot_P-littoralis_Contig131.127.2|Name=mRNA_P-littoralis_Contig131.127.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=159bp MAKGKSTALQGMAADAMRDNPQLTGVALKRELERTGLKVTDRTATRLKNNback to top mRNA from alignment at P-littoralis_Contig131:497429..501181- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig131.127.2 ID=mRNA_P-littoralis_Contig131.127.2|Name=mRNA_P-littoralis_Contig131.127.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3753bp|location=Sequence derived from alignment at P-littoralis_Contig131:497429..501181- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig131:497429..501181- >mRNA_P-littoralis_Contig131.127.2 ID=mRNA_P-littoralis_Contig131.127.2|Name=mRNA_P-littoralis_Contig131.127.2|organism=Pylaiella littoralis U1_48|type=CDS|length=477bp|location=Sequence derived from alignment at P-littoralis_Contig131:497429..501181- (Pylaiella littoralis U1_48)back to top |