mRNA_P-littoralis_Contig131.117.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig131.117.1 vs. uniprot
Match: A0A6H5KNW7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNW7_9PHAE) HSP 1 Score: 278 bits (710), Expect = 1.890e-90 Identity = 142/158 (89.87%), Postives = 144/158 (91.14%), Query Frame = 3
Query: 75 SSGEESAFRHMRARTSSQVRAFVDEVGIANQFPALNDA------LVLCRRPACLLHLYKKHEQRASKDRSKDRRARKAARTPRHSKGCVGAPEPQTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRSTSEVLTNDASSGYQP 530
S GEE AFRHMRARTSSQVR FVDEVGIANQF ALN+ LVLCRRPACLL LYKKHEQRASKDRSKDRRARKAARTPRH+KG VGAPEPQTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRST EVLTNDASSGYQP
Sbjct: 18 SGGEEPAFRHMRARTSSQVRDFVDEVGIANQFTALNEGNLGVITLVLCRRPACLLQLYKKHEQRASKDRSKDRRARKAARTPRHAKGWVGAPEPQTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRSTCEVLTNDASSGYQP 175
BLAST of mRNA_P-littoralis_Contig131.117.1 vs. uniprot
Match: A0A6H5KD58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD58_9PHAE) HSP 1 Score: 221 bits (564), Expect = 1.240e-67 Identity = 112/145 (77.24%), Postives = 122/145 (84.14%), Query Frame = 3
Query: 105 MRARTSSQVRAFVDEVGIANQFPALNDA------LVLCRRPACLLHLYKKHEQRASKDRSKDRRARKAARTPRHSKGCVGAPEPQTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRSTSEVLTNDASSG 521
MR RTSSQVRAFVDE+GIANQFPAL++ L LC+R CLL LYKKHEQR SK+RSKDRRARKAA+TPRH+ G PEPQTHLKRRWLDRYCTSPEAV+ALLGAV ITGC+LD+CGGPTDAVATRL T EVLTND SSG
Sbjct: 1 MRPRTSSQVRAFVDEIGIANQFPALDEGGLGASTLTLCKRSGCLLQLYKKHEQRMSKERSKDRRARKAAQTPRHATGMWTVPEPQTHLKRRWLDRYCTSPEAVEALLGAVSITGCILDVCGGPTDAVATRLGPTCEVLTNDVSSG 145
BLAST of mRNA_P-littoralis_Contig131.117.1 vs. uniprot
Match: A0A6H5K8H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8H6_9PHAE) HSP 1 Score: 209 bits (531), Expect = 2.320e-62 Identity = 107/141 (75.89%), Postives = 115/141 (81.56%), Query Frame = 3
Query: 105 MRARTSSQVRAFVDEVGIANQFPALNDA------LVLCRRPACLLHLYKKHEQRASKDRSKDRRARKAARTPRHSKGCVGAPEPQTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRSTSEVLTND 509
MR RTSSQVRAFVDE+GIANQ PAL++ + LCRR CLL LYKKH QR SK++SKDRRARKAA+TPRH+ G PEPQTHLKRRWLD YCTSPEAVDALLGAV ITGC LDMCGGPTDAVATRLR T EV TND
Sbjct: 1 MRPRTSSQVRAFVDEIGIANQLPALDEGGLGESTVTLCRRSGCLLQLYKKHNQRMSKEQSKDRRARKAAQTPRHATGMWTLPEPQTHLKRRWLDWYCTSPEAVDALLGAVSITGCNLDMCGGPTDAVATRLRPTCEVFTND 141
BLAST of mRNA_P-littoralis_Contig131.117.1 vs. uniprot
Match: A0A6H5L2H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H4_9PHAE) HSP 1 Score: 202 bits (514), Expect = 4.100e-61 Identity = 112/156 (71.79%), Postives = 115/156 (73.72%), Query Frame = 3
Query: 72 ASSGEESAFRHMRARTSSQVRAFVDEVGIANQFPALNDA------LVLCRRPACLLHLYKKHEQRASKDRSKDRRARKAARTPRHSKGCVGAPEPQTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRSTSEVLTNDASSG 521
A GEESAFRHMRARTSSQVR FVDEVGI+NQFPALN+ LVLCRRPACLL LYKKHEQRASKDRSKDRRARKA RTP H+KG VGAPEPQTHLKR CVLDMCGGPTDAVATRLR T EVLTND SSG
Sbjct: 26 AFGGEESAFRHMRARTSSQVRDFVDEVGISNQFPALNEGNLGVITLVLCRRPACLLQLYKKHEQRASKDRSKDRRARKAVRTPHHAKGWVGAPEPQTHLKR------------------------CVLDMCGGPTDAVATRLRFTCEVLTNDVSSG 157
BLAST of mRNA_P-littoralis_Contig131.117.1 vs. uniprot
Match: A0A6H5KU02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU02_9PHAE) HSP 1 Score: 174 bits (441), Expect = 7.650e-49 Identity = 100/244 (40.98%), Postives = 110/244 (45.08%), Query Frame = 1
Query: 397 MLCWVLWVSRDAFWTCAVGPRTPSRPVFDPRPKFSPTTRPADTNLDASLESFPEDFLAANSGKRPDF---------------------------------------------------------------------------------------------------------------------------------LEPCADRGGWLKTNPPSVCVFVRRAKYTRANNAKTGEFWGVWYTQEMS 741
MLCWV+W+SRDAFWTCAVGPRTPSRP FDPR ++S TTRPADTNLDASLESFPEDFLAA SGKRP++ LEPCADRGGWL+TNPPSVC+F+RRAKYTRANNAK GEFWGVWYTQE+S
Sbjct: 1 MLCWVMWISRDAFWTCAVGPRTPSRPAFDPRARYSRTTRPADTNLDASLESFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMSLATKGVAFKMPISFLEPCADRGGWLQTNPRLCVCFYAEQNTRVRTMRRRPADTNLDASLESFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMSLATKGVEFKMPISCLEPCADRGGWLQTNPPSVCLFLRRAKYTRANNAKMGEFWGVWYTQEVS 244
BLAST of mRNA_P-littoralis_Contig131.117.1 vs. uniprot
Match: A0A6H5KTR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTR5_9PHAE) HSP 1 Score: 161 bits (407), Expect = 1.030e-44 Identity = 88/147 (59.86%), Postives = 98/147 (66.67%), Query Frame = 3
Query: 96 FRHMRARTSSQVRAFVDEVGIANQFPALNDA------LVLCRRPACLLHLYKKHEQRASKDRSKDRRARKAARTPRHSKGCVGAPEPQTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRSTSEVLTNDASS 518
FR RART +R+FVDE G+A++FP LC+R CLL LYKKHE RS++R ARKA +TPRHS+ APEP TH KRR DRYCTSPEAVDAL AV ITGCVLDMCGGP DAVA T EVLTND SS
Sbjct: 42 FRQTRARTGELLRSFVDEAGLADRFPGFQSGAAGPNLFALCKRSGCLLELYKKHEWA----RSRERVARKAKQTPRHSRTWSAAPEPVTHHKRRRFDRYCTSPEAVDALRDAVAITGCVLDMCGGPDDAVAMGFGGTCEVLTNDVSS 184
BLAST of mRNA_P-littoralis_Contig131.117.1 vs. uniprot
Match: A0A6H5JUK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK3_9PHAE) HSP 1 Score: 161 bits (407), Expect = 2.820e-43 Identity = 93/166 (56.02%), Postives = 107/166 (64.46%), Query Frame = 3
Query: 60 VVPHASSGEESA-------FRHMRARTSSQVRAFVDEVGIANQFPALN------DALVLCRRPACLLHLYKKHEQRASKDRSKDRRARKAARTPRHSKGCVGAPEPQTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRSTSEVLTNDASS 518
++P + SG SA FRH RART VR+FVDE GIA++FP + L LC+R CLL LY+K E RS++R ARKA + PRHS+ APEP TH KRR LDRYCT PEAV+ L AV I GCVLDMCGGP DAVA RST EVLTND SS
Sbjct: 16 IMPSSRSGRCSACLEWGQDFRHTRARTGELVRSFVDEAGIADKFPGFQSIAAGTNLLALCKRAGCLLELYQKQEWA----RSRERVARKAKQMPRHSRMWSAAPEPVTHDKRRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSS 177
BLAST of mRNA_P-littoralis_Contig131.117.1 vs. uniprot
Match: A0A6H5JAW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW8_9PHAE) HSP 1 Score: 150 bits (379), Expect = 7.800e-42 Identity = 75/88 (85.23%), Postives = 78/88 (88.64%), Query Frame = 3
Query: 258 DRSKDRRARKAARTPRHSKGCVGAPEPQTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRSTSEVLTNDASSG 521
DRSKDRRARKAARTPRH+KG APEP+ HLKRR LDRYCTSPEAVDALLG+V ITGCV DMCGGPTDAVA RLRST EVLTND SSG
Sbjct: 2 DRSKDRRARKAARTPRHAKGWKSAPEPEIHLKRRLLDRYCTSPEAVDALLGSVDITGCVSDMCGGPTDAVAARLRSTCEVLTNDVSSG 89
BLAST of mRNA_P-littoralis_Contig131.117.1 vs. uniprot
Match: D7G0Y0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y0_ECTSI) HSP 1 Score: 140 bits (354), Expect = 1.160e-36 Identity = 67/78 (85.90%), Postives = 71/78 (91.03%), Query Frame = 3
Query: 288 AARTPRHSKGCVGAPEPQTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRSTSEVLTNDASSG 521
AARTPRH+KG APEPQTHL+RRWLDRYCTSPEA+DA LGAV ITGCVLDMCGGPTDAVATRLRST E+LTND SSG
Sbjct: 2 AARTPRHAKGQRTAPEPQTHLRRRWLDRYCTSPEAMDASLGAVDITGCVLDMCGGPTDAVATRLRSTCEILTNDVSSG 79
BLAST of mRNA_P-littoralis_Contig131.117.1 vs. uniprot
Match: D8LSI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI1_ECTSI) HSP 1 Score: 138 bits (348), Expect = 1.980e-36 Identity = 70/110 (63.64%), Postives = 74/110 (67.27%), Query Frame = 1
Query: 511 RPADTNLDASLESFPEDFLAANSGKRPD---------------------------------FLEPCADRGGWLKTNPPSVCVFVRRAKYTRANNAKTGEFWGVWYTQEMS 741
RPADTNL+ASLE FPEDFLAA SGKRP+ FLEPCADRGGWL+TNPPSVCVF+RRAKYTRANNAKTGEFWGVWY QEMS
Sbjct: 28 RPADTNLNASLELFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMSLATKGVAFKMPIFFLEPCADRGGWLQTNPPSVCVFLRRAKYTRANNAKTGEFWGVWYPQEMS 137 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig131.117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig131.117.1 >prot_P-littoralis_Contig131.117.1 ID=prot_P-littoralis_Contig131.117.1|Name=mRNA_P-littoralis_Contig131.117.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=218bp MPSYCADDLLACCICTKSTSKGLARIGVKTGERARQLGRLAIPRVALVLLback to top mRNA from alignment at P-littoralis_Contig131:463685..465957- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig131.117.1 ID=mRNA_P-littoralis_Contig131.117.1|Name=mRNA_P-littoralis_Contig131.117.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2273bp|location=Sequence derived from alignment at P-littoralis_Contig131:463685..465957- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig131:463685..465957- >mRNA_P-littoralis_Contig131.117.1 ID=mRNA_P-littoralis_Contig131.117.1|Name=mRNA_P-littoralis_Contig131.117.1|organism=Pylaiella littoralis U1_48|type=CDS|length=654bp|location=Sequence derived from alignment at P-littoralis_Contig131:463685..465957- (Pylaiella littoralis U1_48)back to top |