mRNA_P-littoralis_Contig131.83.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig131.83.2
Unique NamemRNA_P-littoralis_Contig131.83.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig131.83.2 vs. uniprot
Match: D8LPT5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT5_ECTSI)

HSP 1 Score: 320 bits (821), Expect = 1.390e-100
Identity = 206/239 (86.19%), Postives = 217/239 (90.79%), Query Frame = 1 
Query:    1 MARLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDYDGHRLRVEMSRGKREFGGGXXXXXXXXXXXXXXXGYGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--RQTEFRAVVTGLPQSASWQDLKDHMRKAGDVNYADVDNKGGGVVHFSNRDGMNYALRKLDGSEFSNRYDNATISVLPHRDNARDSRSRSRSPPRRERSRDRR 711
            M+RLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYD+DG+RLRVEMSRGKREFGGG  XXXXXXXXXXXXX    XXXXXXX  XXX XXXXXXXXXX           RQTE+RAVVTGLPQSASWQDLKDHMRKAGDVNYADVD+KGGGVVHF+N++GM+YALRKLDGSEFSNRYD ATISVLPHRD+ RDSRSRSRSPPRRERSR+RR
Sbjct:   53 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDFDGYRLRVEMSRGKREFGGGFGXXXXXXXXXXXXXXXXXXXXXXXXYGXXXGXXXXXXXXXXMGPPRGGFGGGRQTEYRAVVTGLPQSASWQDLKDHMRKAGDVNYADVDHKGGGVVHFNNKEGMDYALRKLDGSEFSNRYDTATISVLPHRDSVRDSRSRSRSPPRRERSRERR 291
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BLAST of mRNA_P-littoralis_Contig131.83.2 vs. uniprot
Match: A0A6H5KN34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN34_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 2.160e-85
Identity = 190/210 (90.48%), Postives = 198/210 (94.29%), Query Frame = 1 
Query:    1 MARLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDYDGHRLRVEMSRGKREFGGGXXXXXXXXXXXXXXXGYGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQTEFRAVVTGLPQSASWQDLKDHMRKAGDVNYADVDNKGGGVVHFSNRDGMNYALRKLDGSEFSNRYDNATISV 630
            M+RLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFED RDADEAVRARDGYD+DG+RLRVEMSRGKREFGGG  XXXXXXXXXX   G G XXXXXXXXXXXXXXXXXXXXXXXX XXXXXX RQTE+RAVVTGLPQSASWQDLKDHMRKAGDVNYADVD+KGGGVVHF+NR+GM+YALRKLDGSEFSNRYD A ISV
Sbjct:   61 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDPRDADEAVRARDGYDFDGYRLRVEMSRGKREFGGGFGXXXXXXXXXXG--GGGXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXGRQTEYRAVVTGLPQSASWQDLKDHMRKAGDVNYADVDHKGGGVVHFNNREGMDYALRKLDGSEFSNRYDTAIISV 268
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BLAST of mRNA_P-littoralis_Contig131.83.2 vs. uniprot
Match: D8LB97_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB97_ECTSI)

HSP 1 Score: 240 bits (613), Expect = 1.020e-69
Identity = 139/239 (58.16%), Postives = 167/239 (69.87%), Query Frame = 1 
Query:    1 MARLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDYDGHRLRVEMSRGKRE---FGGGXXXXXXXXXXXXXXXGYGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQTEFRAVVTGLPQSASWQDLKDHMRKAGDVNYADVDNKGGGVVHFSNRDGMNYALRKLDGSEFSNRYDNATISVLPHRD--NARDSRSRSRSPPRRERSR 702
            MAR+YIGNLPMD+ EKD++D+FYK+G+I D+ LK P RPPAFGF+TF+D+RDA+EAVRARDGYD DG RLRVE+SRG+R+    GGG               G+GG          XXXXXX                +QTE+R +VTGLP SASWQDLKDHMRKAG+  Y DVD+KGGG+VHF  RD M+YALRKLDGS+F N ++ + ISVLPHR     RDSRSRSRSP R  R+R
Sbjct:    1 MARIYIGNLPMDVTEKDMDDVFYKFGRIVDIDLKTPARPPAFGFITFQDARDAEEAVRARDGYDMDGSRLRVEISRGRRDPFGMGGG---------------GHGGRMGMPMGGGRXXXXXXGGAGF-----------QQTEYRVIVTGLPPSASWQDLKDHMRKAGEPTYTDVDHKGGGIVHFRTRDDMDYALRKLDGSDFRNPFEKSRISVLPHRGVGGGRDSRSRSRSPKRSRRAR 213
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BLAST of mRNA_P-littoralis_Contig131.83.2 vs. uniprot
Match: A0A836CC30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC30_9STRA)

HSP 1 Score: 221 bits (563), Expect = 2.570e-62
Identity = 125/218 (57.34%), Postives = 151/218 (69.27%), Query Frame = 1 
Query:    1 MARLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDYDGHRLRVEMSRGKREFGGGXXXXXXXXXXXXXXXGYGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQTEFRAVVTGLPQSASWQDLKDHMRKAGDVNYADVDNKGGGVVHFSNRDGMNYALRKLDGSEFSNRYDNATISVLPHRDNAR 654
            MAR+Y+GNLPM+++EKD+ED+FYKYG+I D+ LK P RPP+F FV FED RDA++AV  RDGY+ DG RLRVE++RG RE                   G+GGXXXXX               XXXXX       RQTE+R +VTGLP SASWQDLKDHMRKAGDV Y DVD++GGG+VH++ R  M+YALRKLD SEF N +D + I VLPHR NAR
Sbjct:    1 MARVYVGNLPMNVREKDVEDLFYKYGRIRDIDLKTPARPPSFAFVAFEDVRDAEDAVSGRDGYEMDGQRLRVELARGARE------------------RGFGGXXXXXFDERGGGRGFGAGRGXXXXXGPPMGGGRQTEWRVIVTGLPPSASWQDLKDHMRKAGDVVYTDVDHRGGGIVHYATRSDMDYALRKLDDSEFRNPFDKSYIRVLPHRANAR 200
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BLAST of mRNA_P-littoralis_Contig131.83.2 vs. uniprot
Match: A0A835YQ88_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ88_9STRA)

HSP 1 Score: 213 bits (543), Expect = 3.400e-60
Identity = 122/214 (57.01%), Postives = 148/214 (69.16%), Query Frame = 1 
Query:    1 MARLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDYDGHRLRVEMSRGKREFGGGXXXXXXXXXXXXXXXGYGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQTEFRAVVTGLPQSASWQDLKDHMRKAGDVNYADVDNKGGGVVHFSNRDGMNYALRKLDGSEFSNRYDNATISVLPHR 642
            MAR+Y+GNLPM+++EKD+ED+FYK+G+I D+ LK P RPPAF FV F+D RDA++AVRARDGY+ DG RLRVE++RG R    G  XXXXXXXXX    G G                                 RQTE+R +VTGLP SASWQDLKDHMRKAGDV Y DVD++GGG+VH++ RD M YALRKLD SEF N +D++ I VLPHR
Sbjct:    1 MARVYVGNLPMNVREKDVEDLFYKFGRIRDIDLKTPARPPAFAFVAFDDVRDAEDAVRARDGYEMDGERLRVELARGAR----GPPXXXXXXXXXGQPMGGG---------------------------------RQTEWRVIVTGLPPSASWQDLKDHMRKAGDVVYTDVDHRGGGIVHYNTRDDMEYALRKLDDSEFRNPFDHSFIRVLPHR 177
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BLAST of mRNA_P-littoralis_Contig131.83.2 vs. uniprot
Match: K7VZN2_MAIZE (Serine/arginine-rich-splicing factor SR34 n=3 Tax=Zea mays TaxID=4577 RepID=K7VZN2_MAIZE)

HSP 1 Score: 178 bits (451), Expect = 4.120e-47
Identity = 101/227 (44.49%), Postives = 133/227 (58.59%), Query Frame = 1 
Query:   10 LYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDYDGHRLRVEMSRGKREFGGGXXXXXXXXXXXXXXXGYGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQTEFRAVVTGLPQSASWQDLKDHMRKAGDVNYADVDNKGGG---VVHFSNRDGMNYALRKLDGSEFSNRYDNATISVLPHRDNARDSRSRSRSP 681
            +Y+GNLP D++E+++ED+FYKYGKI D+ LK+P RPP + FV FED RDA+EA+  RDGY++DGHRLRVE + G R                    G+GG                                R +E+R +VTGLP SASWQDLKDHMRKAGDV +++V  +GGG   +V ++N D M YA++KLD +EF N +  A I V  +      S SRSRSP
Sbjct:    9 IYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGYNFDGHRLRVEAAHGGR----------GNASSHDRSSGFGGGGGARRGVS-----------------------RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGRAYIRVKEYNGKRGRSYSRSRSP 202
[Close]
BLAST of mRNA_P-littoralis_Contig131.83.2 vs. uniprot
Match: Q64HC3_MAIZE (ASF/SF2-like pre-mRNA splicing factor SRP32 n=10 Tax=Panicoideae TaxID=147369 RepID=Q64HC3_MAIZE)

HSP 1 Score: 178 bits (451), Expect = 4.360e-47
Identity = 101/227 (44.49%), Postives = 133/227 (58.59%), Query Frame = 1 
Query:   10 LYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDYDGHRLRVEMSRGKREFGGGXXXXXXXXXXXXXXXGYGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQTEFRAVVTGLPQSASWQDLKDHMRKAGDVNYADVDNKGGG---VVHFSNRDGMNYALRKLDGSEFSNRYDNATISVLPHRDNARDSRSRSRSP 681
            +Y+GNLP D++E+++ED+FYKYGKI D+ LK+P RPP + FV FED RDA+EA+  RDGY++DGHRLRVE + G R                    G+GG                                R +E+R +VTGLP SASWQDLKDHMRKAGDV +++V  +GGG   +V ++N D M YA++KLD +EF N +  A I V  +      S SRSRSP
Sbjct:    9 IYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGYNFDGHRLRVEAAHGGR----------GNASSHDRSSGFGGGGGARRGVS-----------------------RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGRAYIRVKEYNGKRGRSYSRSRSP 202
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BLAST of mRNA_P-littoralis_Contig131.83.2 vs. uniprot
Match: A0A804R7I7_MAIZE (Uncharacterized protein n=6 Tax=Panicoideae TaxID=147369 RepID=A0A804R7I7_MAIZE)

HSP 1 Score: 178 bits (451), Expect = 6.990e-47
Identity = 101/227 (44.49%), Postives = 133/227 (58.59%), Query Frame = 1 
Query:   10 LYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDYDGHRLRVEMSRGKREFGGGXXXXXXXXXXXXXXXGYGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQTEFRAVVTGLPQSASWQDLKDHMRKAGDVNYADVDNKGGG---VVHFSNRDGMNYALRKLDGSEFSNRYDNATISVLPHRDNARDSRSRSRSP 681
            +Y+GNLP D++E+++ED+FYKYGKI D+ LK+P RPP + FV FED RDA+EA+  RDGY++DGHRLRVE + G R                    G+GG                                R +E+R +VTGLP SASWQDLKDHMRKAGDV +++V  +GGG   +V ++N D M YA++KLD +EF N +  A I V  +      S SRSRSP
Sbjct:    9 IYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGYNFDGHRLRVEAAHGGR----------GNASSHDRSSGFGGGGGARRGVS-----------------------RHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGRAYIRVKEYNGKRGRSYSRSRSP 202
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BLAST of mRNA_P-littoralis_Contig131.83.2 vs. uniprot
Match: A0A7S0I1L9_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0I1L9_9CRYP)

HSP 1 Score: 177 bits (448), Expect = 7.530e-47
Identity = 93/223 (41.70%), Postives = 133/223 (59.64%), Query Frame = 1 
Query:    1 MARLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDYDGHRLRVEMSRG--------KREFGGGXXXXXXXXXXXXXXXGYGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQTEFRAVVTGLPQSASWQDLKDHMRKAGDVNYADVDNKGGGVVHFSNRDGMNYALRKLDGSEFSNRYDNATISVLPHRD 645
            MAR+Y+GNLP+D++E+D++D+FYKYG+I D+++K P RPPAF FV F++  DA++AVR RDG  ++G RLRVEMSRG        KR  GGG                                                   R++++R +++GLP+SASWQDLKD+ R+AG++ Y DVD +GGG+V F+N D  +YA++K D +EFSN +D   I V+  RD
Sbjct:    1 MARIYVGNLPLDIRERDVDDLFYKYGRIRDIEVKTPSRPPAFAFVEFDNLYDAEDAVRGRDGVMFEGARLRVEMSRGTAATYGYDKRGGGGGAGKAPPRNL------------------------------------------RRSDYRVIISGLPKSASWQDLKDYFRQAGEIVYTDVDRQGGGIVEFANEDDRDYAIKKFDDTEFSNPFDRGYIRVMKPRD 181
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BLAST of mRNA_P-littoralis_Contig131.83.2 vs. uniprot
Match: A0A6U2EED2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2EED2_HEMAN)

HSP 1 Score: 176 bits (445), Expect = 1.410e-46
Identity = 106/203 (52.22%), Postives = 137/203 (67.49%), Query Frame = 1 
Query:    1 MARLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDYDGHRLRVEMSRGKREFGGGXXXXXXXXXXXXXXXGYGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQTEFRAVVTGLPQSASWQDLKDHMRKAGDVNYADVDNKGGGVVHFSNRDGMNYALRKLDGSEFSNRY 609
            MA++Y+GNLP+D + +D+ED+F+KYG+I D+ LK P RPPAF FVTFE + DA++A+R RDG D++G RLRVEMSR     GGG               G  GXXXXXXXXXXXXXX                  R+++FR +++GLP S SWQDLKD MR+AGDV Y DVD +GGGVV FSN+    YA++KLD +EF +R+
Sbjct:    1 MAKVYVGNLPLDCRVRDIEDLFWKYGRIRDIDLKTPSRPPAFAFVTFESTMDAEDAIRGRDGVDFEGQRLRVEMSRAS---GGGF--------------GDRGXXXXXXXXXXXXXXRGGYDDRGPPRGGPARDLRRSDFRVIISGLPTSCSWQDLKDFMRQAGDVIYTDVDRQGGGVVEFSNKSDQEYAVKKLDDTEFKDRF 186
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig131.83.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPT5_ECTSI1.390e-10086.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KN34_9PHAE2.160e-8590.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB97_ECTSI1.020e-6958.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CC30_9STRA2.570e-6257.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YQ88_9STRA3.400e-6057.01Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K7VZN2_MAIZE4.120e-4744.49Serine/arginine-rich-splicing factor SR34 n=3 Tax=... [more]
Q64HC3_MAIZE4.360e-4744.49ASF/SF2-like pre-mRNA splicing factor SRP32 n=10 T... [more]
A0A804R7I7_MAIZE6.990e-4744.49Uncharacterized protein n=6 Tax=Panicoideae TaxID=... [more]
A0A7S0I1L9_9CRYP7.530e-4741.70Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A6U2EED2_HEMAN1.410e-4652.22Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig131contigP-littoralis_Contig131:361946..371191 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LPT5
Preferred nameSR30
PFAMsRRM_1
Model size2150
Max annot lvl2759|Eukaryota
KEGG koko:K12890
KEGG Pathwayko03040,ko04657,ko05168,map03040,map04657,map05168
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016604,GO:0016607,GO:0031974,GO:0031981,GO:0034641,GO:0035061,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363
Exons5
Evalue1.25e-107
EggNOG OGsCOG0724@1|root,KOG0105@2759|Eukaryota
Ec32 ortholog descriptionSR RNA splicing protein
Ec32 orthologEc-18_002400.1
DescriptionRNA splicing
Cds size780
COG categoryL
BRITEko00000,ko00001,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig131.83.2prot_P-littoralis_Contig131.83.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig131 363316..371191 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789599.5680544-UTR-P-littoralis_Contig131:361945..3633151680789599.5680544-UTR-P-littoralis_Contig131:361945..363315Pylaiella littoralis U1_48UTRP-littoralis_Contig131 361946..363315 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789599.5795267-CDS-P-littoralis_Contig131:363315..3634681680789599.5795267-CDS-P-littoralis_Contig131:363315..363468Pylaiella littoralis U1_48CDSP-littoralis_Contig131 363316..363468 -
1680789599.5883286-CDS-P-littoralis_Contig131:364145..3642861680789599.5883286-CDS-P-littoralis_Contig131:364145..364286Pylaiella littoralis U1_48CDSP-littoralis_Contig131 364146..364286 -
1680789599.6016822-CDS-P-littoralis_Contig131:364823..3649061680789599.6016822-CDS-P-littoralis_Contig131:364823..364906Pylaiella littoralis U1_48CDSP-littoralis_Contig131 364824..364906 -
1680789599.6098807-CDS-P-littoralis_Contig131:367132..3673561680789599.6098807-CDS-P-littoralis_Contig131:367132..367356Pylaiella littoralis U1_48CDSP-littoralis_Contig131 367133..367356 -
1680789599.6219468-CDS-P-littoralis_Contig131:371012..3711911680789599.6219468-CDS-P-littoralis_Contig131:371012..371191Pylaiella littoralis U1_48CDSP-littoralis_Contig131 371013..371191 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig131.83.2

>prot_P-littoralis_Contig131.83.2 ID=prot_P-littoralis_Contig131.83.2|Name=mRNA_P-littoralis_Contig131.83.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=260bp
MARLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDS
RDADEAVRARDGYDYDGHRLRVEMSRGKREFGGGGGGGGFGGGGYGGGGG
YGGGGGGGGGYGGGYVGYGGGGMGPPRGGGGFGGGRQTEFRAVVTGLPQS
ASWQDLKDHMRKAGDVNYADVDNKGGGVVHFSNRDGMNYALRKLDGSEFS
NRYDNATISVLPHRDNARDSRSRSRSPPRRERSRDRRRSRSRSPPPRDSY
RGRSRSRSR*
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mRNA from alignment at P-littoralis_Contig131:361946..371191-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig131.83.2 ID=mRNA_P-littoralis_Contig131.83.2|Name=mRNA_P-littoralis_Contig131.83.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=9246bp|location=Sequence derived from alignment at P-littoralis_Contig131:361946..371191- (Pylaiella littoralis U1_48)
ATGGCTCGCCTGTACATCGGGAACCTGCCCATGGACATGAAGGAGAAAGA
TCTGGAGGACATCTTCTACAAGTACGGCAAGATCACGGACATGCAACTGA
AAATGCCCGAGCGCCCCCCGGCGTTCGGGTTTGTGACATTCGAGGACTCC
AGAGACGCCGACGAGGCCGTTAGGGCTAGGTGAGGCACCACAGACAGTTT
TGACGGCGGAAGGGGGGGGCAAGTTGAAATCACCCCCCCCCTCCCCCCCC
TTCACTCTGCCTCTTATCTCTTATTTATCTCGTCATCCCAAAGTGCGGAG
AAAATTTTGGAGGACTGCGGAAGTCTCTACCTCTACCCAGCACCCGGCTG
TAAAATACCTCGATATTTTTTTTTTTTTTGCATATTGAGACTGTTGGTTA
GGCCGGATGTTATGTCAACGGTTTTTTCCAGACAGATTCTGGAATCCGTG
CGACATTCATGCATCGATTGTGCCCCCTCCATGATGAAAAGGCAGACCTC
ACACCACATTACTATACCGTCCTTCCTTCATAATCACCTGATCGCCGCCG
AACCCACCGAGGCTATCAGCCTCACATCTGTAGGCTTCTTCGTAGCTAGT
TTTATTTGTCCTTGGCTCCTTGTGCGCCGAGCATGATCGATATATGTCAG
CAAAACACAAAATTTTCAGGGCTGTTCACGGGTCACGGGTCAGATCCGAC
AGGTCGTGTCGTGTCGGGTCGTTGCGTGCAGATTTTGAGACTGCGTATCA
CGGATACGCAACGACCTGTGAGATTTTGAGATTGCACATTGCGGGTCACT
GACACGCAACGACCCGTAAGATTTTGAGAATGCGTGTCACTTGACACGAC
CCGACCCGTCAGATTCTGAGTGACCCGCAAATCGACGGGCCATACGCGGG
TCAGGCTAGGTTGACCCGTGCTTTGACCCGCCGTGACTTGCGCGTGTGAC
ACGCGGGTCAACAATGAAGAGGTCGAGGGTCACACGGGTGAACCTTTGTC
CGCAAGAATCTCCCCGCGGGGTGTCGGGGATAACAGGTTGTTGGCAAGGT
TGAAAGTGCGAATGTTTGTGTGTGTGTGGCCTGTGGACGCCTCTCACACA
GCACTCACAGCCTGACCCCGACAGACGACCCGTGCTAAACTGGTGACCTG
ACACGTGATGGCTTCCTCCTCCAACCCGTCGATGACCCCCCTGCCCGGCG
GCGGGACCGCAGCTTGGCGAAAGCGTGCGAACGACGGGGAAGGTCGCACA
GCACCACGGTGCTGAGATGTTCGTCGTTTGGCGTTTCTTCACAAAGTTTT
CCCCACCGTTTCTAGCTGATAGCAAGAACGTGAATTGCGCCTTGAAAGTG
GACGACGGAGGCAACTCGGGTACAGGGTTGATACACCACCTTAGGAGAAG
CGAGAGCGCTACCCACAGGGCAGCAATGGCCGACTTCGAGTATATGTTTC
TGAAGCAATAGCAGTACCTCGCTTTGGACATGCGAGAATCCAAACCTCTC
ACGCCTGCACTGTTGTTGTCTGTAGTCCGCAAGTTGCTCTTAGATTTGGC
CCGGATTCGGTCTGACCCGCGGGTTAGGAGGGGTTTAACACACGGGTCAC
CAAAGCCCGACCCGTCAGTTGACCCGTACAAGAAGCCTCTCACGTCTACA
CTGCTGTCTGTCGTAAGCAAATTGCAAATTCGTTTTTGATTCGGCCCGGA
TTCGGTCTGACCCGCGGGTTAGAACCGCGGGTAAACCGCGCGGGTCAGGA
CGGGTCAGTACACGGGTCACTCAAGACTGACCCGTAAATTGACCCGTACG
GGTCATGACACGACCCGAACCGTACAGTGCGGGTCAGTGGTACGCAACGA
CCCGTCAGATTTTGACATTGCGTGTCACTGACACGCAACAACCCGTACAT
TGCGGGTCAGTGACACGCAGCGACCCGTCAGATTTTGAGATTGCGAGTCA
GTAACACGCAACGACCCGTCAGGTTTTGAGATTGCGTGTCACTTTACACA
TCCCAACCCGTTTGGCACAGTCCGACTCGTCAGATTTGCGACATGCGTGT
GACACGACCCGCCGATCGTGTCATGACCCCGTGAACAGCCCTGACAATTC
GAAGGCCACAATCCGTATGCCAAATGCCACGGGATTTTAGACTTTCGGAC
ATCTCAAACGAATCTTGTCTTTGGTGTTTGGATTTTGCGGACATAGATCG
ATCATGCTCGGCACGCAAGAAGCCCACGACAAATAAAACTAGCTGCGAAG
AAGCCTACAGATGTGAGGCTGATAGCCTCGGTGGGTTTGGTGGCGATCAG
GTGACCATGAAGAGAGGACGGTATGGTGATGTGGTGTGAGGTCTGTATTT
TCATCATGGAGGGCGCACAATCGATGCATGAATGTCGCACGGATTCCAGA
ATCTGTCTGGAAAAATCCGTTGCCATAACATCCGGCCTAACGGATTGATT
TTTTTCGAGGGGATTTTTCCTTGACACCCCCCCCCCATCCGCCCCCGAAA
TCCGGAGAGCCCAAACGGCTGAAAAGGCTATTATTTGAGCACAAGAGACA
AAACTAGGCCCTTAGACACCAATGGCTATCAAACCTGTCGGAGCGTGTGC
TCCAGTGTTCTTGAGGCTGGCCACAGCAAGTTTGGCGGGTGTGGGCTTAG
GCGGTGGCGAGATTCTGGCGGCAAGTGTGGATTGTGGTAGAAAAAATCGG
AGAAACAAATAGTTCGATCCAGCCTGCTTTTCTGCCAAAAAAGCAGGCTC
GAACGATCTGTTTCTGTTTCACCTCATATTCTTCTGCCTCGACACACACA
GCTGGCAAAATCGCGCCACCGCTTCAGCCCACACCCGCCAAACTTGCTGT
GGTCAAACTCAGGATACTGGAGCGCACGCTCGAATAGATGTGGTCGCTGC
TGGTGTCCCAGGGGCCGAGTTCTGGTTGGTGCCGTCTGCTATAGTGTTCA
ACATGTCGTTAAGGGCGGGGGCGGGGGCGGTAAAATTTTATCGAGTTTAA
TCTGGGGTTTCTGAACAAAATCAAAGCCAACAATCCCTGGACTGCGAGAA
ACAGCCCGAGCGCTTATTTTTGTGCTGGTGGTATGTTCGACACACCTCTC
TTCTGTTTCCGTATATAAGTTCTCCCCCCACCTTTCTCCCAGCATGCGAC
ACATTGCTGGCTCGGCATCGCACGTTTTGAATGAACACGCTCGGCTTTGA
GTTGAGACGGGGCGCAACTTGACTCCGGGGTCGAGTGCTACTATTGCTCT
GCGGGTGTTGAGACTAGTCATGGCTTTGCGGCACTCCGCGTCGCATTCTT
CCTTTGTCGGCGACACCGACATCCTTTTCTGCGTGATGTAGTTCATGTAT
GCGCCGTGGATGAATTTTGTCGTGCAGGCGAGGCTGCCGGTGTTGTCGAC
GAAGACGGAATGTACCCTCGAAGCGCCTGCACAACTGACCTTGGTCGTCC
CTGGAAAGAACTGGCTCCCCTTCCAAGGAAATACAGTGGAAAGCTGATTG
CTTATTTTCAACTCTTCCTGCATGTGCATACGAAGTATGTACATCGTAGC
TTTACTTTTGGCCAGGACGAAGGTCCAATGAAATACCTTTGTGACGTGTG
CACCAACCACGTGCCGCTGCTGCTGCTGCTGCTGCCGCTGCCAAAATTAA
AAGACCTCGTCCCAATCAAAAGACAAAAAAAAAACGAGACATCAAAAAGA
CACACATCAAACGCACCCACGCATCAAACTGCGTGAATACTGCTGTACAG
CTGAAGTTTTCTGGATGTTCTCACCCGGTGGACCTCGTGGCCTGATCCAT
TTCCGCGGGGCCTCACGTTATCCTCGACGCGGCAGGGACGGTTACGACTA
CGATGGGCACCGGCTGCGCGTCGAGATGTCTCGCGGCAAGCGCGAATTCG
GCGGTGGCGGTGGCGGCGGCGGCTTCGGTGGCGGTGGGTACGGTGGCGGC
GGTGGGTACGGCGGAGGCGGTGGCGGGGGTGGAGGCTACGGTGGCGGATA
CGTCGGATACGGCGGTGGTGGCATGGGCCCGCCCCGTGGCGGCGGCGGAT
TTGGCGGAGGTGAGAGCTTGAGATCTCGACGCAGCCCATTGATTCAGGGA
CAAAACATTATTGTTTTCCCTTGCGTTGTGAGCCGTTGCACGCTTGTTGT
TCGGTGCACGGACAGTATCTAGATTTCCCGTCTTGAGGGCTTCGTTAAAA
ATCGTAACTCGAGAACTGCGTCAAAGCTTTGCCCGATCTTTTTTTGTCTT
TCGCACAAATCAGCGAGGGTTGGGGGGGGGCAGCGTGGTGCGATATCCGC
TACCGTTTTATCCGTTGAGCCTGCTCGTCGAGATGGGCGTTGTTTTGTTT
TTTTTTTGGTGGCGGCATTGCACGAAAGTGTATTTCGTTCCTCTTTTGGT
CTTTTGTGATTGGTGGGTGCAAAATATGACATCGCTCGCGTGGAAGTGTT
CTGTGTGGTTTCGCCCCTCCCCTTCCCCCCCTTGTGCCCTTCCCGGCGCG
TTTCGCTGTCGTTTCCGGCCTGGCGCTTTTCGCAATGGGCTTTCCGCGCA
CTGCTGCTCGGCCTCTCTCACCACCGCCTTGTAGATGGTATGCAGTTTTA
GTTCTTCTGCCGCTTAACACTGGCGATTGCCTGAAATTTGCCCTTGGAGG
ATACGTGGGTGGATGGCGGCAGGGATAACCTGATGCTCGGAAGGTAGTTG
CTCCGTTTGGTTTTTCTTTGGGCCATTGGGCACCCTAACAGATGCAAGGA
GGGCTCGCAAAATAGGGGGTGCAAAAATGGACGGAAGGCTTGCACGTGGT
GGTGTCTGCGACCGCTCCGCTACGCCCGCTAGCTTGGTCCGCTTTCGCAG
ACGCGGGGAGTGGTCTGGTCTGGCCTGGTTTAACGCCTCACAACTTCTCT
GCTGCCGGGGTTGTGTGTGGCCCTACAGCAGCTCGCTTTTTTAGGGGGGG
GGTGGTGGGGTGGGGAAGGGGGCTCCGTGATGCGCGCCAACCGTTCCGAG
AACACGGGTCTGGTCGGGTGGGGGCGGGGGGGGGGGCGTGGGTGTTGCTG
TGGTTATGTGCTTCAAATACAGCTCCGCTCTGGTGGCATTGGGCCGGATG
AGGATAGGGTATGCTCGCTTGGCTCATTGGCATCGCTGGGCTCGTTGGCA
TCGCTTGGTTCTTTGGCACCACTACCCATGGCTCGTCCTCGATCGCTTCC
GTGCCCTTGAGACTGCTACCTGATGATGGTGATGCCGGGGGAGGAAACGG
TGCCTCTTCCGCTTGCGGGCTACCTAGTTTTGCCGTTGCGCGTGGAGAGC
AGAGAGGGAGAGTGAGACAGAAAGCACGCTACATAGCTATTTGGTGGGAG
GGGGGAGGGGGGTGGTGTGGAGGCACGGACGGGAATGCTACAAACCAAAA
GACAGACGAGAGAGGGAGAACGAAAACACAATTTTTTCCCCAGACATGCT
TAGAGTATGATGGTGGAAGAGGTGGGGCACACGGAAAAGCGTTTGCAGCT
CTCGGCTTGCTTGCAGCCACCGGGGCTCTGAGAGAGCCGAGTTTTTGGAG
TGGCTGGGTGCTTGCTGGGGTTTCGGCACAGGTGAAGGCCATCTATCGAA
TCGCACCGTTGTTGTTTTCTTTCATTATCATGGTGTCGTGCGCTTGTGTT
TCTTCTATGCGCGAAGCCGCGTTCGTTTTTCGTTTTCATATTTCTCCCTC
TCTCCCTGGCCTTCACATGGCTAGCTTACCGTATTGTTTCGGGTGGGGAA
AAAACAGGAAATCTACCTCTTGCATCTGTCGTGCTGCGAAAAGTGACTTT
TTTACAGTGCATCATTCAGCATTGTTGCCTAAACAATAACACCATACAGA
AAAAAGCCGCGCACGTATATGAAAGTTTTGCCTCTGTGGAGCTGTCAGTG
GCCTGCTTTGTGTGCATGACGGACAGAGAACGTTCGAAATTCCCGCCTCG
TTGTTTTGCGAGGCTTTCTGTGAACAATACCACGCGTATAACGCATGAAG
CAAGCTGCCAAGCCGTATGGTTTAGATCATACATGTATCACGAGGGTTTT
TTTAACCGACATTGTCCCCCTTTCTCCTTCATATCAAATACCTACAGAGG
TTTTTCTCCTTCCTTGCGTGCCCTATTTATCTCAACCAAGTCGCGCACCA
ACACAATCATGTACTTCGAAGTAGGAGACACCTACTCGGCCCGCCTTTCG
TTCACACCTCCCTCCCTCTTCTGTGTATTTTTTTTTGTCCTTTTGTTTGG
ACGTATGTTCGTTTTTCCTAACCCAACTCAAACAGGGCGGCAGACAGAGT
TCCGTGCAGTGGTGACCGGGCTGCCTCAGAGCGCCAGCTGGCAGGACCTG
AAGGACCACATGCGCAAGGTGAGGGCGGGTGTGGTGTCGTTCTTGACATC
ATGCAGTCATGGCATGATACTGCTGTAGGTCGGCTGAAAGGAGGAACTCT
CATTCGCTTTGTTGAGTGGAAGTTCGTTTTGTTGGGGAAAATGGGGTCAT
TTAGCTTTCTGCTATCGGCGTGTTTTTTCGGGTGAGAAAGACGTGGACTG
CGCCGGCATGTTTGCTGTGAGTGTTGGTAGAGGTTTTAAAACATCGTGAG
CGACTTGCCTCAGAATATTTTCCTGCTTCGCTGCGCGTGTGTAGATGTAA
ACCACTTGGACTTGACTAAACAAGGGAGAGAGGGGGCGTGATAATCCTGC
TCTTGTTTCGTCTTGACCGGACGCCTACCGGAGCGCAGCAGGAGTAAGCA
AACAGAAATGAGCTCCGTACAGTAGTGATAAGAAAAACGAAGTTGAAATA
ATATTCAGATGCGAGTACAGCAGTAGCATGACAATGTCGCTCAAGTTCTT
GTTGCTTACGAAAAACGTCACTTAGTCGGTGGACTGATGGTACTTGAAAC
AACAGGCGGGCGACGTGAACTACGCCGACGTCGACAACAAGGGTGGGGGC
GTGGTCCACTTCAGCAACAGGGACGGGATGAACTACGCCCTCCGCAAGCT
CGACGGCTCAGAGTTCTCCAACCGATACGACAACGCCACGATATCGGTAA
GCACTGCGCGTGGTCATTGCTACTTACTGCTGTATCCTGGGGGGAAGCGA
GTGCAGTTTCTTGTCCCGTTTTGGGTCTAGCACACACGGTTTCCACGTGT
GTTTTTGTCCCTTCATGCTTCGGTAAAAAGATGGGTGTCCTAGCGAGCAT
TGCCTATTTTGTTTGTTCTCACAAACACATCAGTTAGTATGTCTCTCTTC
ATTCGAGGATCTGTTTCGGAGTTATTTTTGTCTGCGTCTGTGTGTACTTT
TTCGGCGTATTTCTGCTTGCGTGCATCGGCGACGGGTTTTCTATGATCCA
GTTTTGCTGTGTTGTCCCGTCCGCCTGTGTTATCTCGCCCCTCCCTCTGT
CCGTTCTCAACATTGAAGCGCATCCCATCGTAACTTGACTCTCTACAACA
CTATCCCGCGATGAGGCCCTCGACAGAAAGAAGTCGATGCTCCTCACATT
ATAAAGTTGTTACACCTGCAACCCCCCTCCTTATTCCTCGCGTTGATTTA
ATTTGACTCTGAAGGAGTCCTGCCGTCGACGCCAAATGTGAAGGAGTAGA
CTGCTCAGCCATCGAATCGCGTAAAAGGTCACCCCATTTCAACCAAGTGA
TGTCTACACCTCTTAACAATATCGCCTTTCCTTCGTACATTGCAAATCAA
ATCGCCCGCTCCGACGCCCGCAGGTGCTCCCTCACCGCGACAACGCCCGT
GACAGCCGATCCAGGAGCCGCTCCCCCCCTCGCCGCGAGCGCTCCCGCGA
CCGCCGCCGCTCGAGGTCCCGATCTCCTCCCCCTCGTGACTCCTACCGCG
GCAGGTCGCGCTCTCGCTCTCGGTGATGCTCTAGTAATGATGTGAAACGG
GTCATGCTCTCGTGCTGAAAAAAATCGACGAGAACGACCACCATGTGTTT
CGGTACTCAATTTCGACGGACTTATTTTCGTGATCATGATGCGGACAGCA
GTGGTTGCTTGTTCTTGCGACCAGGTGTCGCCGGGATGTGTCCGTTTGTG
TTTGGGTGTTGCTTCATTTTTGGGGAGATGGGGGGGGGGCGAGGTAACGG
GCACGAAAATGTTGGGTTTCGGAATGTCAACGGCGTTGTGCCGAAGCATA
GAATTTGACCATGGCAAGTTGGTTGGGAAAACAGAGATTCGTATTGTTTG
AGCTATGATATACAGCGCGCGCACGGTGGCGCGCAAGGAGAAAAATGCAC
AACTGCGTATGTGAAGCAGAGCAAGAAAAGAGGAGCTGACTGATTGTGTC
GCGGCTGTGCTGCTGCGGCGGTGGTGCTCTGGGCTGTGCCGGGTCTGGTA
GACTGCGGGTATGTTAAAGGGCGTGTCACCGCAAATCTTAGAGAGGGATT
CAGTCTGCGGAAGGATTGTCCTACATGGCACTGCAACTTCATTTTTTCGG
ACGTTTGAGAACTTGCGACAGTGGTACCAACTCTAGTGCATGTTCTTGCA
ACGCAACATCCACGCTGCGGTGGTACTTTTCGTGCAGAAAGACAAAATGC
GTACCTGCGGAGAGAAAAGTTGAGAGTCCATGGTAAAATGACTTCCTTGT
TGGCTTTCCGGTCCGGAGGCATTTTTCTGGACTTGGAGCCACACATAATG
TTTCTGCCCATGTACGACGTCTGTCGCCGGCAATCGAGCCATTTTGTTCG
ATCAGCAATTTGGGCATCATTGTCTCCTATTTTTCTGTCCCTCACAATTT
TGTTGCTTTTTCGGGTTTCTTATCCGACGCGGGGCTGAACGAAGCAAGGT
CGTGCGTGTGGTGCGCGATTTGTTCTGTTTTTTTCCCGAAGAAATCCGTT
AGTCACCGACGCTCTGATCGGTGAAATCGGTCGAAGGGAGTTTTTCCGAG
TCAAACATTTTCCTGCAAGTATTGTGTGGCTAAGCAGAAAACTGCAGCCA
AGTCTTTTCGCTTTTTCCTGTAGTAGTGATGTGGCTTGGGAATCACTTGA
TGGTACTGGTCCTGCTGCTGCTTCTGTTTTTCGTTTCAGTGGCTCCGCGC
TGCTGTCTGCCAGTCGATGAGACGCTTAGCTTTGCAGAGCTGACCGGACT
TCTAATTTGGGTTACAATAAACCCTTCATTTTCGCACCCACGAAAATTAG
AAACCAACACTACGCATCGATCGACTGATGAGAGGTCAGACCGCGCACCC
GATCAGTCGTCGCAACGTAGGGAAACGCGAAAAAACATGCCTTGAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig131:361946..371191-

>mRNA_P-littoralis_Contig131.83.2 ID=mRNA_P-littoralis_Contig131.83.2|Name=mRNA_P-littoralis_Contig131.83.2|organism=Pylaiella littoralis U1_48|type=CDS|length=780bp|location=Sequence derived from alignment at P-littoralis_Contig131:361946..371191- (Pylaiella littoralis U1_48)
ATGGCTCGCCTGTACATCGGGAACCTGCCCATGGACATGAAGGAGAAAGA
TCTGGAGGACATCTTCTACAAGTACGGCAAGATCACGGACATGCAACTGA
AAATGCCCGAGCGCCCCCCGGCGTTCGGGTTTGTGACATTCGAGGACTCC
AGAGACGCCGACGAGGCCGTTAGGGCTAGGGACGGTTACGACTACGATGG
GCACCGGCTGCGCGTCGAGATGTCTCGCGGCAAGCGCGAATTCGGCGGTG
GCGGTGGCGGCGGCGGCTTCGGTGGCGGTGGGTACGGTGGCGGCGGTGGG
TACGGCGGAGGCGGTGGCGGGGGTGGAGGCTACGGTGGCGGATACGTCGG
ATACGGCGGTGGTGGCATGGGCCCGCCCCGTGGCGGCGGCGGATTTGGCG
GAGGGCGGCAGACAGAGTTCCGTGCAGTGGTGACCGGGCTGCCTCAGAGC
GCCAGCTGGCAGGACCTGAAGGACCACATGCGCAAGGCGGGCGACGTGAA
CTACGCCGACGTCGACAACAAGGGTGGGGGCGTGGTCCACTTCAGCAACA
GGGACGGGATGAACTACGCCCTCCGCAAGCTCGACGGCTCAGAGTTCTCC
AACCGATACGACAACGCCACGATATCGGTGCTCCCTCACCGCGACAACGC
CCGTGACAGCCGATCCAGGAGCCGCTCCCCCCCTCGCCGCGAGCGCTCCC
GCGACCGCCGCCGCTCGAGGTCCCGATCTCCTCCCCCTCGTGACTCCTAC
CGCGGCAGGTCGCGCTCTCGCTCTCGGTGA
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