prot_P-littoralis_Contig131.73.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig131.73.2
Unique Nameprot_P-littoralis_Contig131.73.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length845
Homology
BLAST of mRNA_P-littoralis_Contig131.73.2 vs. uniprot
Match: D8LPT3_ECTSI (EsV-1-7 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT3_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 8.710e-57
Identity = 208/281 (74.02%), Postives = 217/281 (77.22%), Query Frame = 0
Query:  349 GSRRNRCLMLGCSKPPRYALPGQKAEYCTLHKMDNYVDVKHPRCESELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRRSAGGGSSSGKHCLSPAKRQRDGPRSIAHDSNAAXXXXXXXXXXXXPGSSMMPFSLRAAVGGAGVLAG---APVSKRGH-------TPARAGGHRRATSESWIDFCPKRVFETTGAKDAAD-GAGVDVVPVPRRSNA-PRRNRHH---APRIANANMASTAAAA 614
            GS+RNRC M GCSKPPRYALPGQKAEYCTLHKMDNYVDVKHPRCESEL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXX ASRRS  G +   K C SPAKR R+GPRS AHDS AAXXXXXXXX    P  +M  FSL A             AP+ KRGH       TPARAGGHRRATSESWIDFCPKRVFETT  KDAAD GA  +  PVPR + A  RR RHH   +PR  N NMA+ AAAA
Sbjct:   12 GSKRNRCQMPGCSKPPRYALPGQKAEYCTLHKMDNYVDVKHPRCESELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASRRSTAGAA---KPCSSPAKRARNGPRSFAHDS-AAXXXXXXXXPPALPAGAMPAFSLGAXXXXXXXXXXXXRAPLPKRGHPXXXXXXTPARAGGHRRATSESWIDFCPKRVFETTTGKDAADLGASDNNDPVPRHAAAVARRARHHHQPSPRTVNTNMATIAAAA 288          
BLAST of mRNA_P-littoralis_Contig131.73.2 vs. uniprot
Match: A0A6H5KQR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR5_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 2.310e-53
Identity = 321/659 (48.71%), Postives = 343/659 (52.05%), Query Frame = 0
Query:  235 VAPTASNPYRTPTAAGAVASRFWDEPGESPSKQQRNSTTPVFSKDHRNRXXXXXXXXXXXXQ---CLFRGCVRRHG-GIQGNRYSSRYCPEHRTPGMSDATTSXXXXXXXXXXXXGGKGSRRNRCLMLGCSKPPRYALPGQKAEYCTLHKMDNYVDVKHPRCESELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRRSAGGGSSSGKHCLSPAKRQRDGPRSIAHDSNAAXXXXXXXXXXXXPGSSMMPFSLRAA---VGGAGVLAGAPVSKRGH-------TPARAGGHRRATSESWIDFCPKRVFETTGAKDAAD-GAGVDVVPVPRRSNA-PRRNRHH---APRIANANMASTAAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGIAGTV-FFQGGS-SGRAGCFGRSLSGTSAATSSDSIS------------------------SVSIAALGGEIANLAAAPISDASPLPSPGSXXXXXSGAATACTSKSTPAPVLPPALTSTRTSSG----FCFSTSFSSGSGEMTTATPSKKQAVAPVATVTMPVTPQSSSDSIGGGSGGSCEGGRGHRFNACDYEASAILLECRSGMLSAEQRI 844
            +A     PYRTPT A A A+ FW EP ESP KQ                XXXXXXXXXXXX    C+F GC RR     +G R    +C EHR PGM+D T                 GS+RNR                           DNYVDVKHPRCESEL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXX ASRRS  GG    K C SPAKR R+GPRS AHDS A XXXXXXXX    P  +M  FSL AA            AP+ KRGH       TPARAGGHRRATSESWIDFCPKRVFETT  KDAAD G   +  PVPR + A  RR RHH   APR  N NMA+ AAAA           XXXXXX                           +GIA T  FF  GS +GR G  GR+ +  +AA                               SVSIAALGGEIA L AAPISDASPLPS   XXXXX                                 F  S +F SGSG        KK   APVATV                      GG  HRF+A DYEASAILLECRSG L  E+R+
Sbjct:  283 IAAVPEEPYRTPTRA-AAATPFWGEPDESPIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCMFGGCSRRATHAARGERPG--HCSEHRLPGMADTTAVATPG-----------GSKRNRXXXXXXXXXXXXXXXXXXXXXXXXXXXDNYVDVKHPRCESELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASRRSTAGGGGGAKPCSSPAKRARNGPRSFAHDS-AXXXXXXXXXPPGLPAGAMPAFSLGAAGXXXXXXXXXXRAPLPKRGHPXXXXXXTPARAGGHRRATSESWIDFCPKRVFETTTGKDAADLGTSDNNDPVPRHAAAVARRARHHHQPAPRTVNPNMATVAAAAAVGVDLPATTAXXXXXXSMMAGKGDDYRFGGG-----------GRGIATTTSFFHPGSVAGRTGGGGRAWAPGNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSIAALGGEIATLTAAPISDASPLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRVSAAFPSGSGTSMAPKQKKKAVHAPVATVXXXXXXXXXXXXXXXXXXXXXXGG--HRFDASDYEASAILLECRSGTLCGEKRV 913          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig131.73.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPT3_ECTSI8.710e-5774.02EsV-1-7 (Partial) (Fragment) n=1 Tax=Ectocarpus si... [more]
A0A6H5KQR5_9PHAE2.310e-5348.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 355..388
e-value: 0.0023
score: 18.5
coord: 297..327
e-value: 2.8
score: 8.7
coord: 392..426
e-value: 6.3E-7
score: 29.9
coord: 430..462
e-value: 4.2E-7
score: 30.4
NoneNo IPR availableGENE3D6.10.140.110coord: 408..469
e-value: 4.7E-8
score: 35.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 609..628
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 465..496
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 589..655
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..277

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig131contigP-littoralis_Contig131:339108..345712 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig131.73.2mRNA_P-littoralis_Contig131.73.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig131 338533..346317 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig131.73.2 ID=prot_P-littoralis_Contig131.73.2|Name=mRNA_P-littoralis_Contig131.73.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=845bp
MQFRITLWRIRQSKVPTPPRRAEGLVISSTTSASRGSSLCLVLSGVSPSR
KYPNSTAVWHHTSTAAAVKPGTTMDARNNGFERPQKQLQYDRSRSISPRI
VRGPEAMMFQPPGSITSPSASKHHRTSSASASAAEAARERQLYDLPSPKS
HHRSRSLHGPCNIQHWAYDEIQAGGAGRDTNSSSSGCAGSNDSHATIFHN
FHQQQQQLEEEGRYIFRTSAADSAVAATVVPVPRVAPTASNPYRTPTAAG
AVASRFWDEPGESPSKQQRNSTTPVFSKDHRNRQHHHQREQQQQQQCLFR
GCVRRHGGIQGNRYSSRYCPEHRTPGMSDATTSTAAAAAATKTTSGGKGS
RRNRCLMLGCSKPPRYALPGQKAEYCTLHKMDNYVDVKHPRCESELGCVR
QPTFGWEGEKARFCSAHKVDGMLDVKNPRCGEPGCLKRPRYGEEGRRARF
CAAHRFDDMVDLASRRSAGGGSSSGKHCLSPAKRQRDGPRSIAHDSNAAA
AAAAAAAAPSPPGSSMMPFSLRAAVGGAGVLAGAPVSKRGHTPARAGGHR
RATSESWIDFCPKRVFETTGAKDAADGAGVDVVPVPRRSNAPRRNRHHAP
RIANANMASTAAAAGSTTNPNGLSMMGEGDNFSFNEEDEREMDNRNHYRH
RSSSSSSSKGIAGTVFFQGGSSGRAGCFGRSLSGTSAATSSDSISSVSIA
ALGGEIANLAAAPISDASPLPSPGSPSSPLSGAATACTSKSTPAPVLPPA
LTSTRTSSGFCFSTSFSSGSGEMTTATPSKKQAVAPVATVTMPVTPQSSS
DSIGGGSGGSCEGGRGHRFNACDYEASAILLECRSGMLSAEQRI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys