mRNA_P-littoralis_Contig131.55.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig131.55.2 vs. uniprot
Match: A0A6H5KNE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNE0_9PHAE) HSP 1 Score: 335 bits (859), Expect = 4.130e-108 Identity = 173/215 (80.47%), Postives = 187/215 (86.98%), Query Frame = 3
Query: 174 MVEKVDAEVVSGSGGKSPTAAKTEELIDSAKDVYSQITSAVKDFDSSQVEDDIKSLVEGLKTNTPAGTSGERGEAWAAAQVGILLFVLLGNLPFLGGSLEVLAGPGLFLGGAGLSLVSALQLGRNFSPWTEPAEGNVLNTTGVYSLCRHPLYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKATMEEDKLTEIHPAYKTYKEEVSKFVPTLY 818
MVEKV+AEVV GSGGKSPT AKTEELIDSAKDV+SQ+ AV +FDSSQ+++D+KSLVEG+KTNTPAG SGERGEAWAAAQV ILLFVL+GNLP LGGS GL+ VSALQLGRNFSPW EPAEG VLNTTGVYSLCRHP+YAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKA MEE+KL +HPAYKTYKEEVSKFVPTLY
Sbjct: 1 MVEKVEAEVVKGSGGKSPTVAKTEELIDSAKDVFSQLKRAVDEFDSSQIQEDVKSLVEGIKTNTPAGVSGERGEAWAAAQVVILLFVLMGNLPLLGGSXXXXXXXXXXXXXXGLATVSALQLGRNFSPWPEPAEGGVLNTTGVYSLCRHPMYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKADMEEEKLVAVHPAYKTYKEEVSKFVPTLY 215
BLAST of mRNA_P-littoralis_Contig131.55.2 vs. uniprot
Match: D8LPT1_ECTSI (S-isoprenylcysteine O-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT1_ECTSI) HSP 1 Score: 317 bits (811), Expect = 9.670e-101 Identity = 180/262 (68.70%), Postives = 194/262 (74.05%), Query Frame = 3
Query: 42 MKATSIAAALAALVAAPATAFVPSIALKHGGSIS---SRRSSTSSLSMVEKVDAEVVSGSGGKSPTAAKTEELIDSAKDVYSQITSAVKDFDSSQVEDDIKSLVEGLKTNTPAGTSGERGEAWAAAQVGILLFVLLGNLPFLGGSLEVLAGPGLFLGGAGLSLVSALQLGRNFSPWTEPAEGNVLNTTGVYSLCRHPLYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKATMEEDKLTEIHPAYKTYKEEVSKFVPTLY 818
MKATSIAAAL A+ AAPA AFVPS+ LK SRRS +S LSMVEK AV++FDSSQ+++D+KSLVEG+KTNTPAG SGERGEAWAAAQV ILLFVLLGNLP LGGSLE GL AGL+ VSALQLGRNFSPW EPAEG VLNTTGVYSLCRHP+YAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKA MEE+KL +HPAYKTYKEEVSKFVPTLY
Sbjct: 1 MKATSIAAALVAVAAAPAAAFVPSVGLKQVAGRQHELSRRSPSSGLSMVEK----------------------------------RAVEEFDSSQIQEDVKSLVEGIKTNTPAGVSGERGEAWAAAQVTILLFVLLGNLPLLGGSLEXXXXXGLXXXXAGLTTVSALQLGRNFSPWPEPAEGGVLNTTGVYSLCRHPMYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKADMEEEKLVAVHPAYKTYKEEVSKFVPTLY 228
BLAST of mRNA_P-littoralis_Contig131.55.2 vs. uniprot
Match: A0A836C7I2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7I2_9STRA) HSP 1 Score: 213 bits (543), Expect = 8.370e-61 Identity = 125/251 (49.80%), Postives = 159/251 (63.35%), Query Frame = 3
Query: 63 AALAALVAAPATAFVPSIALKHGGSISSRRSSTSSLSMVEKVDAEVVSGSGGKSPTAAKTEELIDSAKDVYSQITSAVKDFDSSQVEDDIKSLVEGLKTNTPAGTSGERGEAWAAAQVGILLFVLLGNLPFLGGSLEVLAGPGLFLGGAGLSLVSALQLGRNFSPWTEPAEGNVLNTTGVYSLCRHPLYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKATMEEDKLTEIHPAYKTYKEEVSKFVPTL 815
AALA +AAPA AFVP G + R S LSMVEKV+ +VVS KS A+T + + +AKDV +Q+ +++ D + ++DD+++ +EG K N AG GERGE IL +++G++P LGG L S L LG+N SPW +P E NVL TTGVYS+CRHP+YAGL+AFS GLGF+TDSFTRIALA LL Y LD+KAT EE L +HPAYKTY+EEV KF P L
Sbjct: 6 AALALSLAAPAVAFVP-----MAGVTAPRPYSR--LSMVEKVEVDVVSPGPKKSAVEAQTSDFVAAAKDVAAQVKNSLSDLSADGLQDDLQAALEGAKANVKAGKVGERGEVLTLIPYAILALLIVGDIPLLGGPXXXXXXXXXXXXXXXXXLTSLLGLGKNLSPWPQPCENNVLITTGVYSICRHPMYAGLLAFSFGLGFATDSFTRIALAALLLYTLDKKATEEEKALEAVHPAYKTYQEEVPKFFPLL 249
BLAST of mRNA_P-littoralis_Contig131.55.2 vs. uniprot
Match: A0A7S4A6W4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6W4_9STRA) HSP 1 Score: 127 bits (318), Expect = 2.610e-29 Identity = 69/168 (41.07%), Postives = 99/168 (58.93%), Query Frame = 3
Query: 312 SQVEDDIKSLVEGLKTNTPAGTSGERGEAWAAAQVGILLFVLLGNLPFLGGSLEVLAGPGLFLGGAGLSLVSALQLGR-NFSPWTEPAEGNVLNTTGVYSLCRHPLYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKATMEEDKLTEIHPAYKTYKEEVSKFVPT 812
S V D + V+ +K+N SG + A Q +LL +L+G++P +GG++E L GPGL + G G L LG N +P+ P EGN L TTG +S RHP+Y GL+ + GL +T+SF R+ + LL +LD K+ EE +L IHPAY+ YK+ KF P+
Sbjct: 71 SNVRDAAQEYVDSVKSNVQVEQSGP-SIVYVAGQAALLLLLLVGDVPVVGGAIETLLGPGLVVAGIGAIAKGVLDLGAGNLTPFAAPVEGNELKTTGAFSYVRHPIYGGLLVAAGGLSVATESFQRLLVVFLLYLLLDAKSAYEEKELERIHPAYRAYKQVTPKFFPS 237
BLAST of mRNA_P-littoralis_Contig131.55.2 vs. uniprot
Match: A0A812JAS7_9DINO (Hypothetical protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812JAS7_9DINO) HSP 1 Score: 122 bits (307), Expect = 4.910e-28 Identity = 65/157 (41.40%), Postives = 91/157 (57.96%), Query Frame = 3
Query: 327 DIKSLVEGLKTNTPAGTSGERGEAWAAAQVGILLFVLLGNLPFLGGSLEVLAGPGLFLGGAGLSLVSALQLGRNFSPWTEPAEGNVLNTTGVYSLCRHPLYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKATMEEDKLTEIHPAYKTYKEEVS 797
D + +E +K N G G+RGE + A+Q+ +LL +L+G +P + SL LAGP G G+ + S QL + SPW G+ L T G+Y RHP+Y GLV LG+ T+S R+ L L +VLD+KAT+EED L E P+Y Y E+ S
Sbjct: 57 DFEGSLEKIKRNIMEGEVGKRGEVYVASQLFLLLCILIGTVPLISSSLYFLAGPLSMAVGGGMIVASVYQLQGDLSPWIVKPAGSTLRTDGIYEYVRHPIYGGLVLLCLGIAVVTNSANRLILTAALYFVLDQKATVEEDNLKESDPSYGAYAEKTS 213
BLAST of mRNA_P-littoralis_Contig131.55.2 vs. uniprot
Match: A0A7S2IJF5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IJF5_9STRA) HSP 1 Score: 125 bits (313), Expect = 6.740e-28 Identity = 72/180 (40.00%), Postives = 102/180 (56.67%), Query Frame = 3
Query: 342 VEGLKTNTPAGTSGERGEAWAAAQVGILLFVLLGNLPFLGGSLEVLAGPGLFLGGAGLSLVSALQLGRNFSPWTEPA--------EGNVLNTTGVYSLCRHPLYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKATMEEDKLTEIHPAYKTYKEEV-SKFVPTLY*TILSSPTERKK 854
+E + +N GT G+RGE + AQ ++L VL+G LP +G L+ G G GG G + ++LG S W PA E ++ TG+YSL RHP+YAGL++ GLGF TDS RI LL Y L++K+ EE K+ E P+Y Y+EEV KF+P + + + P E K+
Sbjct: 143 METIWSNMAGGTPGKRGELYFGAQTALVLLVLVGELPLVGDPLKFALGSGAIFGGVGAIIAGVVELGDQLSAWPVPATSSSSQKKEDGLIVDTGIYSLVRHPIYAGLISICGGLGFVTDSTVRIFFTILLYYCLEKKSEFEEGKIIEEDPSYILYREEVRGKFIP--HEIVEALPWEEKR 320
BLAST of mRNA_P-littoralis_Contig131.55.2 vs. uniprot
Match: A0A812RMC1_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812RMC1_9DINO) HSP 1 Score: 115 bits (287), Expect = 5.760e-26 Identity = 64/157 (40.76%), Postives = 89/157 (56.69%), Query Frame = 3
Query: 327 DIKSLVEGLKTNTPAGTSGERGEAWAAAQVGILLFVLLGNLPFLGGSLEVLAGPGLFLGGAGLSLVSALQLGRNFSPWTEPAEGNVLNTTGVYSLCRHPLYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKATMEEDKLTEIHPAYKTYKEEVS 797
D + +E +K N G G+RGE + A+Q+ +LL +L+G +P + SL LAGP G G+ + S QL + SPW G T G+Y RHP+Y GLV LG+ T+S R+ L L +VLD+KAT+EED L E P+Y Y E+ S
Sbjct: 7 DFEGSLEKIKRNIMEGEVGKRGEVYVASQLFLLLCILIGTVPLISSSLYFLAGPLSMAVGGGMIVASVYQLQGDLSPWIVKPAG----TDGIYEYVRHPIYGGLVLLCLGIAVVTNSANRLILTAALYFVLDQKATVEEDNLKESDPSYGAYAEKTS 159
BLAST of mRNA_P-littoralis_Contig131.55.2 vs. uniprot
Match: A0A1Q9D4C1_SYMMI (Uncharacterized protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9D4C1_SYMMI) HSP 1 Score: 124 bits (312), Expect = 1.500e-25 Identity = 71/176 (40.34%), Postives = 102/176 (57.95%), Query Frame = 3
Query: 327 DIKSLVEGLKTNTPAGTSGERGEAWAAAQVGILLFVLLGNLPFLGGSLEVLAGPGLFLGGAGLSLVSALQLGRNFSPWTEPAEGNVLNTTGVYSLCRHPLYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKATMEEDKLTEIHPAYKTYKEEVS-KFVPTLY*TILSSPTERK 851
D + +E +K N G G+RGE + A+Q+ +LL +L+G +P + SL LAGP G G+ + S QL + SPW G+ L T G+Y RHP+Y GLV LG+ T+S R+ L L +VLD+KAT+EED L E P+Y Y E+ S K +P + +LSS + +K
Sbjct: 1556 DFEGSLEKIKRNIMEGEVGKRGEVYVASQLFLLLCILIGTVPLISSSLYFLAGPLSMAVGGGMIVASVYQLQGDLSPWIVKPAGSTLRTDGIYEYVRHPIYGGLVLLCLGIAVVTNSANRLILTAALYFVLDQKATVEEDNLKESDPSYGAYAEKTSGKLLPDVR-ELLSSDSAQK 1730
BLAST of mRNA_P-littoralis_Contig131.55.2 vs. uniprot
Match: B8LBH8_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LBH8_THAPS) HSP 1 Score: 104 bits (260), Expect = 1.480e-22 Identity = 61/154 (39.61%), Postives = 89/154 (57.79%), Query Frame = 3
Query: 381 GERGEAWAAAQVGILLFVLLGNLPFLGGSLEVLAGPGLFLGGAGLSLVSALQLGRNFSPWTEPAEGNVLNTTGVYSLCRHPLYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKATMEEDKLTEIH-PAYKTYKEEVS-KFVPTLY*TILSS 836
GERGEA+ AQ +LLF+ +G++PF+G ++ GP + L G + SA L N SP+ P+E L +G+Y L RHP+Y G++ GL TDS R+ L +L +VLD K+ EE L E + Y+ YK +V+ KF P +L+S
Sbjct: 1 GERGEAYVIAQFSLLLFIAIGDVPFIGDAITTFLGPSMILLGLFIVYKSASDLKNNLSPYPVPSEKGALIDSGIYGLMRHPMYTGVLIGMAGLSLVTDSVLRMLLTVVLYFVLDVKSDYEETLLVESYGKEYQDYKVKVANKFFPAELKDVLTS 154
BLAST of mRNA_P-littoralis_Contig131.55.2 vs. uniprot
Match: A0A835Y2F1_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y2F1_9CHLO) HSP 1 Score: 105 bits (263), Expect = 3.150e-22 Identity = 64/152 (42.11%), Postives = 87/152 (57.24%), Query Frame = 3
Query: 375 TSGERGEAWAAAQV---GILLFVLLGNLPFLGGSLEVLAGPGLFLGGAGLSLVSALQLGRNFSPWTEPAEGNVLNTTGVYSLCRHPLYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKATMEEDKLTEIHPA-YKTYKEEVSKFVPTLY 818
T G RGEAW A Q+ +L F G F+ + +LA LGGA + +A +LG N +P P E L TTG+Y CRHP+YAGL+ F+LGL ++ S TR+A+ L +VL+ K MEE+ L H Y+ Y+E+ KF P LY
Sbjct: 72 TFGTRGEAWVAGQLVLCALLAFPPAGLTSFIDTAAVILA-----LGGAAVFSYAAYELGDNLTPLPAPREDAKLVTTGLYGYCRHPIYAGLLVFALGLSVASHSETRLAITAALFWVLNSKVEMEEEGLVAKHGRQYEVYREKTKKFFPYLY 218 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig131.55.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig131.55.2 >prot_P-littoralis_Contig131.55.2 ID=prot_P-littoralis_Contig131.55.2|Name=mRNA_P-littoralis_Contig131.55.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=260bp MKATSIAAALAALVAAPATAFVPSIALKHGGSISSRRSSTSSLSMVEKVDback to top mRNA from alignment at P-littoralis_Contig131:293401..304685- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig131.55.2 ID=mRNA_P-littoralis_Contig131.55.2|Name=mRNA_P-littoralis_Contig131.55.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11285bp|location=Sequence derived from alignment at P-littoralis_Contig131:293401..304685- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig131:293401..304685- >mRNA_P-littoralis_Contig131.55.2 ID=mRNA_P-littoralis_Contig131.55.2|Name=mRNA_P-littoralis_Contig131.55.2|organism=Pylaiella littoralis U1_48|type=CDS|length=780bp|location=Sequence derived from alignment at P-littoralis_Contig131:293401..304685- (Pylaiella littoralis U1_48)back to top |