mRNA_P-littoralis_Contig131.24.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig131.24.1
Unique NamemRNA_P-littoralis_Contig131.24.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig131.24.1 vs. uniprot
Match: D8LPV0_ECTSI (Acyl-CoA-binding domain-containing protein 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV0_ECTSI)

HSP 1 Score: 646 bits (1667), Expect = 7.440e-210
Identity = 379/581 (65.23%), Postives = 425/581 (73.15%), Query Frame = 1 
Query:    1 AKVDIGKAQLANRRAREDAAVRSLARKRDAQHLKISSGANRSRHKWEVRLQDSHLLESRGSWEKRKDSGGSVFYYCLSEEGLPEPFSWDPPECWDAMDPSVLALAEAAXXXXXXXXXXXXXXSEAEGPL-----TDQLSS-FRLLELAPGQQEXXXXXXXXXXXXXXXXXXXXXDDFTTPRPLTEEEKLSLAVTRLAENENLLGALAWRLGIPLADVRPDGREPPLARDRGEDEEELDENREKIELLDHDDASDSDGERGDARDPPGPMPQDHSDLRRIRIAERRRKSQVAEGYGHKQPKRQSIVPRLPIAEAPHDGGAASLGGEVGGLGWRRLARADLGQKFLERVVNPRMQGPAPEAVNTRPKPRPTSTTDPSKATKHFEEWSMPVETMFIADVVQEHARVLEEAERRLRQEELLDDSSLGPFDPASFSANGPQEFTTMERRMMALAENDGRSKEEVEEEEKKAKAVIAAKTGNLPDLEGLLYENVPPDTKDSNGNSLLLLAXXXXXXRIMKFLLRKGATMNLQNLDGNTVLHFCYSQGRQARCDLADYLKAKGADDSLLNSEGCTCYEGLQADRVANI 1725
            AKV+IGKA+LA+RRAREDAA RSLARK DAQHLKIS+GA+RSRHKWE+R+QDSH++E+RGSWE+RKD GGSVFY+C SEEGLPEPFSWDPPECW   DPSVLAL  AA  XXXXXXXXXXXX             +QLSS  R L   P Q                       D   TPR LTEEE+LSLAVTRLA NE LL ALAWRLGIPLADVRPDGREPPLARD  EDEEELDENRE+IEL +HDDASDS+GERGD R+ PGP+PQDH+DLRR+R+AERRRK+Q   G+GHKQPK  SIVPRLP+ +    G A  L GE+GGLGWRRLARADLGQKFLERVVNPRM+GP+PEAVNT PKPRP+STTDPS ATK  E+WS+PVE MF+ DVV EHAR+L EAERR+++EEL+DD     FD A F+ANGPQEFTT+ERR+MALAE+DGR+KEE+EEEE KAKAVIAAKTGNL +LEGLLYENVPPDTKDSNGN+LLL  XXXXXX                                                         TCYEGLQADRVANI
Sbjct: 1453 AKVEIGKARLADRRAREDAATRSLARKTDAQHLKISAGADRSRHKWELRMQDSHIVETRGSWEQRKDLGGSVFYFCKSEEGLPEPFSWDPPECWGESDPSVLALEGAAAAXXXXXXXXXXXXXXXXXXXXXXXXAEQLSSSLRTLGFDPDQS-----------GGGYTNNGGGHDGDATPRQLTEEEQLSLAVTRLAGNEKLLEALAWRLGIPLADVRPDGREPPLARDDQEDEEELDENREQIELGEHDDASDSEGERGDTRESPGPLPQDHTDLRRMRVAERRRKAQADRGHGHKQPKH-SIVPRLPLTDESQGGRAVGLEGEIGGLGWRRLARADLGQKFLERVVNPRMEGPSPEAVNTSPKPRPSSTTDPSNATKRSEDWSVPVEAMFVGDVVAEHARILHEAERRMKKEELVDDXXSAAFDAAKFAANGPQEFTTIERRLMALAEDDGRNKEEIEEEENKAKAVIAAKTGNLSELEGLLYENVPPDTKDSNGNTLLLXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTCYEGLQADRVANI 2018
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BLAST of mRNA_P-littoralis_Contig131.24.1 vs. uniprot
Match: A0A6H5KAT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT0_9PHAE)

HSP 1 Score: 602 bits (1552), Expect = 4.670e-195
Identity = 334/500 (66.80%), Postives = 380/500 (76.00%), Query Frame = 1 
Query:    1 AKVDIGKAQLANRRAREDAAVRSLARKRDAQHLKISSGANRSRHKWEVRLQDSHLLESRGSWEKRKDSGGSVFYYCLSEEGLPEPFSWD--PPECWDAMDPSVLALAEAAXXXXXXXXXXXXXXSEAEGPLTDQLSSFRLLELAPGQQEXXXXXXXXXXXXXXXXXXXXXDDFTTPRPLTEEEKLSLAVTRLAENENLLGALAWRLGIPLADVRPDGREPPLARDRGEDEEELDENREKIELLDHDDASDSDGERGDARDPPGPMPQDHSDLRRIRIAERRRKSQVAEGYGHKQPKRQSIVPRLPIAEAPHDGGAASLGGEVGGLGWRRLARADLGQKFLERVVNPRMQGPAPEAVNTRPKPRPTSTTDPSKATKHFEEWSMPVETMFIADVVQEHARVLEEAERRLRQEELLDDSSLGPFDPASFSANGPQEFTTMERRMMALAENDGRSKEEVEEEEKKAKAVIAAKTGNLPDLEGLLYENVPPDTKDSNGNSLLLLA 1494
            AKV+IGKA+LA+RRAREDAA RSLARK DAQHLKIS+GA+RSRHKWE+R+QDSH++ESRG WE+RKD GGSVFY+C SEEGLPEPF WD     C  A   SVL   +                +   G  T+                                      D  TPR LTEEE+LSLAVTRLA NE LL ALAWRLGIPLADVRPDGREPPLARD  EDEEELDENRE+IEL +HDDASDS+GE+GD R+ PGP+PQDH+DLRR+R+AERRRK+Q   G+G+KQPK  SIVPRLP+ +    G A  L GE+GGLGWRRLARADLGQKFLERVVNPRMQGP PE VNT PKPRP+STTDPS ATK  E+WS+PVE MF+ DVV EHARVL EAERR+++EEL+DDSS   FD A F+ANGPQEFTT+ERR+MALAE+DGR+KEE+EEEE KAKAVIAAKTGNL +LEGLLYENVPPDTKDSNGN+LLLLA
Sbjct: 1274 AKVEIGKAKLADRRAREDAATRSLARKTDAQHLKISAGADRSRHKWELRMQDSHVVESRGPWEQRKDLGGSVFYFCKSEEGLPEPFRWDFYIRTCVIAST-SVLCGRDRTGLGVVLHPKVLSRSNCGGGGYTNN-------------------------------GGGHVGD-ATPRQLTEEEQLSLAVTRLAGNEKLLEALAWRLGIPLADVRPDGREPPLARDDQEDEEELDENREQIELGEHDDASDSEGEQGDTRESPGPLPQDHADLRRMRVAERRRKAQADRGHGYKQPKH-SIVPRLPLTDESQGGRAVGLEGEIGGLGWRRLARADLGQKFLERVVNPRMQGPRPEVVNTSPKPRPSSTTDPSNATKRSEDWSVPVEAMFVGDVVAEHARVLHEAERRMKKEELVDDSSSAAFDAAKFAANGPQEFTTIERRLMALAEDDGRNKEEIEEEENKAKAVIAAKTGNLSELEGLLYENVPPDTKDSNGNTLLLLA 1739
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BLAST of mRNA_P-littoralis_Contig131.24.1 vs. uniprot
Match: H3GZC2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZC2_PHYRM)

HSP 1 Score: 117 bits (294), Expect = 8.690e-24
Identity = 86/264 (32.58%), Postives = 127/264 (48.11%), Query Frame = 1 
Query:  964 GLGWRRLARADLGQKFLERVVNPRMQGPAPEAVNTRPKPRPTSTTDPSKATKHFEEWSMPVETMFIADVVQEH--ARVLEEAERRLRQEELLDDSSLGPFDPASFSANGPQEFTTMERRMMALAEND--------GRSKEEVEEEEKKAKAVIAAKTGNLPDLEGLLYENVPPDTKDSNGNSLLLLAXXXXXXRIMKFLLRKGATMNLQNLDGNTVLHFCYSQGRQARCDLADYLKAKGADDSLLNSEGCTCYEGLQADRVANI 1725
            G GW+RL  + L   F   V     +GP    +N      P    DP+  +        P E       ++ H   R  E+   +  Q   L  +      P+S           + R  +A+A++D          S++   +E+++A+A++ A+  NL  LE  L + V  +T+D++GNSL +LA      R+ KFLLR+ A MNLQNL+GNT LH+ Y+       DLA+YLK KGA D+  N  G TCYEGL  D V +I
Sbjct: 1388 GEGWKRLKTSRLPPSFARSVYKAHTEGPRSSFINQTNHASPVGMLDPADCS--------PYEAPEFVPELRVHFVPRPAEDLHEKKTQWVALLRAQQASGTPSS----------AVRRGAVAVADDDPVDDLFERDPSQQNESKEQREARALLCARNNNLEGLELALDQGVDVNTRDNHGNSLFILACQQGNKRLAKFLLRRHADMNLQNLNGNTALHYLYAY---KHTDLAEYLKGKGAKDTTQNGAGLTCYEGLSQDDVDSI 1630
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BLAST of mRNA_P-littoralis_Contig131.24.1 vs. uniprot
Match: A0A812X336_SYMMI (HOS4 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X336_SYMMI)

HSP 1 Score: 103 bits (256), Expect = 8.380e-23
Identity = 50/102 (49.02%), Postives = 70/102 (68.63%), Query Frame = 1 
Query: 1420 LEGLLYENVPPDTKDSNGNSLLLLAXXXXXXRIMKFLLRKGATMNLQNLDGNTVLHFCYSQGRQARCDLADYLKAKGADDSLLNSEGCTCYEGLQADRVANI 1725
            +E  L E++  DT D  GN+LL+LA      R+ K+LLR+GA +N+Q+L G+T L +CY+    +  +LADYLK++GADDS+LN EG TCYEGL    +A I
Sbjct:    1 MEDALEEDISIDTSDQFGNTLLILAAQQGSRRMCKYLLRRGANINIQSLAGHTALRYCYAY---SHFELADYLKSRGADDSILNGEGLTCYEGLSTGGIAAI 99
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BLAST of mRNA_P-littoralis_Contig131.24.1 vs. uniprot
Match: A0A662XT26_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XT26_9STRA)

HSP 1 Score: 109 bits (273), Expect = 3.010e-21
Identity = 65/182 (35.71%), Postives = 97/182 (53.30%), Query Frame = 1 
Query: 1228 LLDDSSLGPFDPASFSAN-----GPQEFTTMERRMMALA-----------ENDGRSKEEVEEEEKKAKAVIAAKTGNLPDLEGLLYENVPPDTKDSNGNSLLLLAXXXXXXRIMKFLLRKGATMNLQNLDGNTVLHFCYSQGRQARCDLADYLKAKGADDSLLNSEGCTCYEGLQADRVANI 1725
            LLD +   P++P  F         P     ++ + +A+            +++G    +  +E+++ +A++ A+  NL  LE  L E V  + +D++GN+L +LA      R+ K LLR+ A MNLQNL GNT LH+ Y     A   LA+YLKAKGA D+  NS G TCYEGL  D  A +
Sbjct: 1057 LLDPTDCSPYEPPDFIPELRAHFVPNPAADLQEKQVAVGVREDLSGPAGLQDEGLKPPKESKEQREGRALLCARNNNLEGLELALDEGVDVNARDNHGNTLFILACQQGNKRLAKLLLRRQADMNLQNLSGNTALHYLYEYRHVA---LAEYLKAKGAQDATPNSAGLTCYEGLSQDPAAQL 1235
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BLAST of mRNA_P-littoralis_Contig131.24.1 vs. uniprot
Match: A0A8K1CP19_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CP19_PYTOL)

HSP 1 Score: 108 bits (271), Expect = 5.300e-21
Identity = 83/259 (32.05%), Postives = 129/259 (49.81%), Query Frame = 1 
Query:  964 GLGWRRLARADLGQKFLERVVNPRMQGPAPEAVNTRPKPRPTSTTDPSKATKHFEEWSMP-VETMFI----ADVVQEHARVLEEAERRLRQEELLDDSSLGPFDPASFSANGPQEFTTMERRMMALAENDGRSKEEVEEEEKKAKAVIAAKTGNLPDLEGLLYENVPPDTKDSNGNSLLLLAXXXXXXRIMKFLLRKGATMNLQNLDGNTVLHFCYSQGRQARCDLADYLKAKGADDSLLNSEGCTCYEGLQADRVANI 1725
            G GW+RL  + L + F   V +   +GP    +N      P    DP +A+ +     +P + T  I    AD+           ER+L+  E + + +       + SA   +  +  +    AL E D    E  + E+   +AV+AA+  NL  LE  L   V  +++D++GNSL +L       +I KFL+R+ A MNLQNL GNT LH+ ++   +   DLA+Y+ +KGA D++ N+ G TCYEGL  D+   I
Sbjct:  996 GEGWKRLKVSRLPKNFARGVYSRHTEGPRSAFINQTNTATPVGMLDPREASPYEPPEFIPELRTQLIPKPNADL----------QERKLQHAEFVANHAT------AVSATPERVISRAQAAKDALFEKDPVELEH-DLEQLVGRAVLAARNNNLQALEDALDGGVDINSRDNHGNSLFILVCQQGNKKIAKFLMRRHADMNLQNLSGNTALHYLHAYKHK---DLAEYITSKGAIDTIANAAGLTCYEGLSVDQAEAI 1234
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BLAST of mRNA_P-littoralis_Contig131.24.1 vs. uniprot
Match: A0A2R5GM67_9STRA (Ankyrin repeat protein, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GM67_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 4.380e-17
Identity = 48/93 (51.61%), Postives = 62/93 (66.67%), Query Frame = 1 
Query: 1447 PPDTKDSNGNSLLLLAXXXXXXRIMKFLLRKGATMNLQNLDGNTVLHFCYSQGRQARCDLADYLKAKGADDSLLNSEGCTCYEGLQADRVANI 1725
            P D KDS GN+LL +A      RI K  LR+GA +N QNL+G TVLH+C + G +    LA+Y   KGADDSL+N++G TCYEGL  + V N+
Sbjct: 1195 PIDAKDSLGNTLLSIAAQNGNKRIAKMCLRRGADINTQNLNGQTVLHYCMAYGFEP---LAEYFMGKGADDSLVNADGLTCYEGLSLEDVQNL 1284
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BLAST of mRNA_P-littoralis_Contig131.24.1 vs. uniprot
Match: A0A7S2SVF6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVF6_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 4.470e-17
Identity = 46/96 (47.92%), Postives = 60/96 (62.50%), Query Frame = 1 
Query: 1411 LPDLEGLLYENVPPDTKDSNGNSLLLLAXXXXXXRIMKFLLRKGATMNLQNLDGNTVLHFCYSQGRQARCDLADYLKAKGADDSLLNSEGCTCYEG 1698
            L ++E  L    P D +D NGN+LL +A      +  K  LR+GA +NLQNL GNT LH+C++ G      LA YL  KGADDS+LNS+G + YEG
Sbjct:   40 LREVEAALDNGFPIDEQDENGNTLLFVAAQNGLRQAAKLCLRRGAHVNLQNLRGNTPLHYCFAYGHSG---LAAYLIEKGADDSILNSDGLSVYEG 132
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BLAST of mRNA_P-littoralis_Contig131.24.1 vs. uniprot
Match: A0A7S2KYF9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KYF9_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.070e-16
Identity = 49/110 (44.55%), Postives = 69/110 (62.73%), Query Frame = 1 
Query: 1405 GNLPDLEGLLYEN---VPPDTKDSNGNSLLLLAXXXXXXRIMKFLLRKGATMNLQNLDGNTVLHFCYSQGRQARCDLADYLKAKGADDSLLNSEGCTCYEGLQADRVANI 1725
            G   +LE L+ ++   +P D  D  GN+LL+++      RI K  LR+G T+NLQN++G T LH+ +  G     DL DYL +KGADDS++N +G TCYEGL  D VA +
Sbjct: 1375 GKYKELENLINDDGWLLPIDYVDGAGNTLLMISCQNGNKRIAKLCLRRGGTINLQNMNGQTCLHYAFGYGFD---DLGDYLISKGADDSIVNVDGLTCYEGLSLDDVAAL 1481
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BLAST of mRNA_P-littoralis_Contig131.24.1 vs. uniprot
Match: A0A067BV43_SAPPC (WW domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BV43_SAPPC)

HSP 1 Score: 94.7 bits (234), Expect = 1.860e-16
Identity = 50/113 (44.25%), Postives = 70/113 (61.95%), Query Frame = 1 
Query: 1396 AKTGNLPDLEGLLYE---NVPPDTKDSNGNSLLLLAXXXXXXRIMKFLLRKGATMNLQNLDGNTVLHFCYSQGRQARCDLADYLKAKGADDSLLNSEGCTCYEGLQADRVANI 1725
            A+ G   ++E LL +   ++  D KD+ GN+LL +A      RI K  LRKGA +N QNL+G ++LH+C++ G     DL +YL  KGA D L+N +G TCYEGL AD V  +
Sbjct: 1349 ARHGKYAEVENLLNQPDWSLSIDMKDNAGNTLLSIACQNNNKRIAKLCLRKGADLNTQNLNGQSLLHYCHAYGFH---DLMEYLMEKGARDDLVNKDGLTCYEGLDADTVEKL 1458
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig131.24.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPV0_ECTSI7.440e-21065.23Acyl-CoA-binding domain-containing protein 6 n=1 T... [more]
A0A6H5KAT0_9PHAE4.670e-19566.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
H3GZC2_PHYRM8.690e-2432.58Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A812X336_SYMMI8.380e-2349.02HOS4 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A662XT26_9STRA3.010e-2135.71Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A8K1CP19_PYTOL5.300e-2132.05Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2R5GM67_9STRA4.380e-1751.61Ankyrin repeat protein, putative n=1 Tax=Hondaea f... [more]
A0A7S2SVF6_9STRA4.470e-1747.92Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2KYF9_9STRA1.070e-1644.55Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A067BV43_SAPPC1.860e-1644.25WW domain-containing protein n=2 Tax=Saprolegnia T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig131contigP-littoralis_Contig131:169699..176796 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LPV0
PFAMsAnk_2
Model size1728
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons11
Evalue1.22e-210
EggNOG OGs2CZ08@1|root,2S7JB@2759|Eukaryota
DescriptionAnkyrin repeats (many copies)
Cds size1728
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig131.24.1prot_P-littoralis_Contig131.24.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig131 169699..176796 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789597.4089398-CDS-P-littoralis_Contig131:169698..1697791680789597.4089398-CDS-P-littoralis_Contig131:169698..169779Pylaiella littoralis U1_48CDSP-littoralis_Contig131 169699..169779 +
1680789597.4208074-CDS-P-littoralis_Contig131:170297..1704761680789597.4208074-CDS-P-littoralis_Contig131:170297..170476Pylaiella littoralis U1_48CDSP-littoralis_Contig131 170298..170476 +
1680789597.431458-CDS-P-littoralis_Contig131:171084..1712281680789597.431458-CDS-P-littoralis_Contig131:171084..171228Pylaiella littoralis U1_48CDSP-littoralis_Contig131 171085..171228 +
1680789597.4432476-CDS-P-littoralis_Contig131:171821..1721341680789597.4432476-CDS-P-littoralis_Contig131:171821..172134Pylaiella littoralis U1_48CDSP-littoralis_Contig131 171822..172134 +
1680789597.4523938-CDS-P-littoralis_Contig131:172605..1727371680789597.4523938-CDS-P-littoralis_Contig131:172605..172737Pylaiella littoralis U1_48CDSP-littoralis_Contig131 172606..172737 +
1680789597.4606285-CDS-P-littoralis_Contig131:173063..1732481680789597.4606285-CDS-P-littoralis_Contig131:173063..173248Pylaiella littoralis U1_48CDSP-littoralis_Contig131 173064..173248 +
1680789597.4719152-CDS-P-littoralis_Contig131:173450..1737061680789597.4719152-CDS-P-littoralis_Contig131:173450..173706Pylaiella littoralis U1_48CDSP-littoralis_Contig131 173451..173706 +
1680789597.4826303-CDS-P-littoralis_Contig131:174373..1744991680789597.4826303-CDS-P-littoralis_Contig131:174373..174499Pylaiella littoralis U1_48CDSP-littoralis_Contig131 174374..174499 +
1680789597.4912744-CDS-P-littoralis_Contig131:175077..1751641680789597.4912744-CDS-P-littoralis_Contig131:175077..175164Pylaiella littoralis U1_48CDSP-littoralis_Contig131 175078..175164 +
1680789597.5043592-CDS-P-littoralis_Contig131:175775..1758921680789597.5043592-CDS-P-littoralis_Contig131:175775..175892Pylaiella littoralis U1_48CDSP-littoralis_Contig131 175776..175892 +
1680789597.514415-CDS-P-littoralis_Contig131:176688..1767961680789597.514415-CDS-P-littoralis_Contig131:176688..176796Pylaiella littoralis U1_48CDSP-littoralis_Contig131 176689..176796 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig131.24.1

>prot_P-littoralis_Contig131.24.1 ID=prot_P-littoralis_Contig131.24.1|Name=mRNA_P-littoralis_Contig131.24.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=576bp
AKVDIGKAQLANRRAREDAAVRSLARKRDAQHLKISSGANRSRHKWEVRL
QDSHLLESRGSWEKRKDSGGSVFYYCLSEEGLPEPFSWDPPECWDAMDPS
VLALAEAAAAAAEEGSSIGGGGSEAEGPLTDQLSSFRLLELAPGQQEQQG
DDGVNNNSSSSGKEKQQHDDFTTPRPLTEEEKLSLAVTRLAENENLLGAL
AWRLGIPLADVRPDGREPPLARDRGEDEEELDENREKIELLDHDDASDSD
GERGDARDPPGPMPQDHSDLRRIRIAERRRKSQVAEGYGHKQPKRQSIVP
RLPIAEAPHDGGAASLGGEVGGLGWRRLARADLGQKFLERVVNPRMQGPA
PEAVNTRPKPRPTSTTDPSKATKHFEEWSMPVETMFIADVVQEHARVLEE
AERRLRQEELLDDSSLGPFDPASFSANGPQEFTTMERRMMALAENDGRSK
EEVEEEEKKAKAVIAAKTGNLPDLEGLLYENVPPDTKDSNGNSLLLLAAQ
QGNKRIMKFLLRKGATMNLQNLDGNTVLHFCYSQGRQARCDLADYLKAKG
ADDSLLNSEGCTCYEGLQADRVANI*
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mRNA from alignment at P-littoralis_Contig131:169699..176796+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig131.24.1 ID=mRNA_P-littoralis_Contig131.24.1|Name=mRNA_P-littoralis_Contig131.24.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7098bp|location=Sequence derived from alignment at P-littoralis_Contig131:169699..176796+ (Pylaiella littoralis U1_48)
GCCAAGGTGGACATCGGCAAGGCACAGCTTGCTAACAGGAGGGCGAGGGA
GGACGCAGCGGTTCGCTCATTGGCGAGAAAGGTAGAGGCATTCGTCTTCT
TCACTTTCCGCGCTAATGTGGTTTTGTTTTTTGTTTAGAAGAATTTTTCA
CGATGGTAAGGCTCGTGATGTGCATATGATACCACCTTTGTGGTCGTCGT
GCTGTGATCCACCGTTCGCTCATTGAATGGTCAGGTCACCAGCATGATAG
CAGATGCTCGGGGTGGTGGTAGAAGGGTGGTGTATTGTTGTCGTACACTT
GGGGATACTCTAACCAAGTCGTAGATAGCAACGTGGGCGAATTCAAGGAA
TGACCAGTAACAATATAAACCGTAAGCACCGAGAAGGCAGACAATAACTG
AAGTACTATAAACATATTTTTGCAACGAATAAACTCCGTGGGGACGCAAA
CGCATATTCACACAGAGTTATGTACAAGAAGAACATCGGGGGGTACATAT
GGGCTACATACATAAATGTTAACGGCGTCACCGTTTAATTTTAAAAACCA
TAATATGAGTATTGGAAACCAAAACCCAATTGCACGGTCCTTGCACCAGA
GGGATGCTCAGCACCTGAAAATTTCGTCCGGCGCCAACCGGAGTCGGCAT
AAGTGGGAAGTGCGACTGCAGGACTCGCACCTCTTGGAAAGCCGGGGCTC
CTGGGAAAAACGAAAAGATTCGGGAGGTAGCGTATTCTACTACTGCTTGT
CGGAGGAGGGCCTCCCGGAACCGTTCAGGTGCTTGTGCTCGTTTTGCGTT
TTTTTAATTTGGCCGGGCATTCGATACCGTAAAAGCGCAACGCCAATCCA
GTCAGATGACGCTGATCGATGTACGGGGTCTCCTACAAAACGCGTGAGGA
ACGGAAAATAGAGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGTGGTCAG
GGTTACAGAGAGAGGTACTGTAAAGAGAGAAACCGTTCGTTGGCCGTGCT
CTCAAGGCGTTACAGTGGACGGAACAACGTGAAAATATATGGACTATCGG
CACGATAATCAAGCTGCTTCTCGCGAGTTTTTTACTCCCTTCTTGCCCTT
GTGCCATCCCTCACGGCAATAGTACCCTTTTCATTTACTATCTTACCTCA
AGCACGTATATGGTACACTTGGTTTGTTTTTTACCCCGAGAAACAGAGAT
TCCAAAGCAATCCAACCCAGCCGCATGGCGCCGGTGAAAGCCCTAAGCGT
AGCCTGTGCCCCTCGGAACTGCGACCGCTGCGCGATCGTGAATATACTCC
CGCCCCCAACCCACCCCTCTCCCCCATCAACCGCCCGTTGTCGACTACCG
ACACCAACACCAACACCAACATCATAATCACTTTAGCTGGGACCCTCCAG
AGTGTTGGGACGCCATGGATCCCTCCGTGTTGGCGTTGGCGGAGGCAGCA
GCAGCAGCAGCAGAGGAAGGGTCCAGCATTGGGGGGGGTGGAAGCGAAGC
GGAAGGTCCTCTCACGGACCAACTCTCTAGGTAAGTGAGGCATGTGGTAA
ACAATGCTAGCACGTATTCAAGAACTTCCTTGGAAGCGAGCAGGGGGTGG
TGGAAATTTACGCCTGGTTCACTAGACCACCCGGCCAGCGCTGGCTGAGC
GGTGCGGTGGATAGGTCCATCTCTAGAGAACAGGGGGTACTGAACGCCCG
TCGAACCTGAACAAAATGTCAGCTCACCGTGTGTTCGCCTCCCTCTCGTC
CTTGCCAGTGCGTACACGACGTAACAGCTTGCGCCTGGTAAGAGTTGACA
CGAACGACAAGGACACCCCCCTACAGTAGCGCTTTCTATTTATGTCCCTG
CTCAACGTACGCGCAACCGCTTGCGGTGCTGTGTCACGGTTCACACGGAA
AGTCCTCAGAATGGATCTGTACGGCCAACAACACCCGCCACGGAGGGTAC
AGACTCGAGCCTTCTACCCCCGACATTCACCACAATCACCCCGCAACTAC
ACATCAGAACATTCATTTTTCTTCCGTGTCAAACTTGCCTCCAACCTGAC
TCCCCCCATCGATTTCCTTCTTCAACACGGTCGCGCGCACACACACAAAC
AACACACACCAACGCACAACCAGCTTTCGTTTGCTAGAGCTTGCCCCGGG
CCAGCAAGAACAACAAGGTGACGACGGCGTTAACAACAACAGCAGCAGTA
GTGGTAAGGAGAAACAGCAGCACGACGATTTCACTACCCCTCGGCCCCTC
ACGGAGGAGGAAAAGCTTTCCTTGGCGGTTACGCGCCTCGCCGAGAACGA
GAATCTCTTGGGGGCTCTGGCGTGGCGGCTGGGGATACCGCTGGCCGACG
TCCGACCCGACGGGAGAGAGCCACCCCTAGCCCGAGATCGTGGTGAGGAC
GAGGAGGAGCTGGACGAAAACAGGGAGAAAATCGAGGTGCAGTAGGTAAA
GGTTGTTTCTGTGGTTTGTTGTTGTTGGTGGTGAGTGGTTGAGGATGTGG
TGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGAT
GTTGTTGTCGTTGTTGTTGTTGTTGTTGCTGCTGTTGTTGGTGCTGTTGC
TGTTGTTGCTGTTGTTGATGTTGTATTCACATTCAAAGCGATCGTCTACA
CCTGTCATTGGTGAGAGACGGCTTACACACATACGTACACAGAGACAGAC
AAAGAGACCGACAGACAGACAGACAGACATATTATACGTGGTTGACGGCT
AGCGCGCTGGAATAGGTAATCAGTAGCCTCCCTCTCTCTCTCTCTCTATC
TCTCTTGAACCCTCTCTCTCTATATATGTACTTCGTATATATATTTTTCT
CGCCCGTGTTGGCGCACGGCGCGCAAACAAACCAACACAAAACAATACGA
CCCACAGCTGCTAGACCACGACGACGCCTCGGATAGCGATGGCGAGAGGG
GCGACGCGAGAGACCCACCGGGACCGATGCCTCAAGACCACTCCGACCTC
CGTCGCATCCGAATTGCAGAGCGAAGAAGAAAGTCTCAGGTAATCAATAC
GAACTACGAAGTACTCCGGAGTACTTCGTAGTGGATAGAGGAGGCAACGT
TAAATTGCTCATCGTTCAGCATGGAAGTCTTTGGAGGCAACACACACTGC
ATGACACACACAGATATACACAGAACAAAGGGTCACAGGCTTGAACAACA
TATATAGCCCTCAGGCGGTCATCATGGCTACTGTTTGCTTGCTTGTTTGG
TATCCGCTATGTAGAGCACCCACCAACTCGCACACCCGGCCCTTGCGACC
CCCATTCTGTACACAGACCGATCCTTCGCTGCACGCGCTCGTTAACATGC
ATACATATTATGCAGGTGGCAGAGGGCTACGGGCACAAACAGCCCAAGCG
TCAGTCCATTGTGCCGAGGCTGCCCATTGCCGAGGCACCGCACGACGGTG
GCGCCGCGAGTTTAGGGGGCGAGGTTGGGGGACTGGGGTGGAGGCGGCTT
GCGAGAGCAGACCTCGGGCAGAAGTTCTTAGAGAGGGTTGTGAACCCCAG
GTGAGATACCTGAGACTTTCCAAACACACATGGATATGTCCACATTCATT
TCTGCTTCGATAATTTCGACCACCCCACCCACCTACACATATTGCTTTAT
GAATAGAACACTTATTCAACGTGTTTTTGCAACACGAAAACTTCGAACAG
AAGAGACCAGAGCCAATCAAAATTTCGTGAACCAACCGAATGACGTAACC
AGGATGCAAGGACCGGCGCCAGAGGCCGTCAACACTCGCCCCAAGCCGCG
CCCCACGTCCACCACGGACCCTTCCAAGGCCACGAAGCATTTCGAGGAGT
GGTCCATGCCGGTGGAAACCATGTTCATCGCGGACGTCGTGCAAGAGCAC
GCCAGGGTTTTGGAGGAGGCGGAGAGGCGTTTAAGGCAAGAGGAGCTGCT
CGACGACAGTTCGTTGGGGCCGTTCGACCCGGCCTCATTCTCCGCCAATG
GCCCGCAGGTATATTCCACACATCATACTCTAACACACAGTACAATTATC
ATGCTTTCTGGGAGAAATTCAATCGAAGCTGATTTTGTTGAAAAAGTGGG
TGTTTCTTCATGAGTCGGCCCGTACTCTGTTTGCCATGCGCCGCATGTAC
TTTATCCCACATGCATTTTATTTATAGGTACTCAAGAGTGTAAAAAGTTC
GCAGTGTTTTCGTTCATTGTTTGGAATCATTGTCTGACCTCTTCTTGTTG
TCACTAATCACGTGTGTGTGCCCATCGTTTTTTATCGTGTGGTTCAATGT
ACTATGTATGTCTTTGCCCGTTGTTGTAGTGTTCATTGTCTCGCCCGTTT
TGCCGACGCATCACAGCATGAAAGGCCAGGCCGGGAGGGGGGGGGGCGTT
CGGCGCAGTCGTATCTCTTTTCCGCGAACGGGCTCCACGCACGCAACAAA
TACTTCTCAACAATACTGCCAGTGCAACGGATCGACAATGTACACAATAC
CACAACATGGCCAAACGGGTGCAGAATAAATGTTGAACCAGCGCTGCTCG
ATCGGCTCCTAGGCGCTCCAAGTTTTCGGTACAGCATTCCTCTTGATGGT
CGAGAACAAAGCCTTCATCTTCCTCCCTTTTACATGCATGCATGCCTTGT
GTGAATAACCTGTGATACAAATAAGGAATTCACGACGATGGAAAGGCGAA
TGATGGCGCTGGCGGAGAACGACGGGCGAAGCAAGGAGGAAGTCGAGGAG
GAAGAGAAAAAGGCCAAGGCCGTCATTGCCGCAAAGACGGGCAACCTTCC
GGTGGGTTTGCTTTTGCTGTCGTTTGTTGTTGGTGGTGTCGTTTGTCGTT
GTCATTGTCGTTGTTGCTGTTGTTGTCGCTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTATTGTTACTGTTATTGCTGTTTTTGGTGGTGGTGGT
GTGGTGTGTTGTATTCTCACTGGGTTTACAAGAAAAACGCTTCGAGATTC
TTTTGGATCATACCGATCTAATGAAGCGATCAAACCTCTTCTGTGTGTTT
TACGCCGTGGATAAAACCCCCCGCAAAAATACCTCTGCGACAACAATTGT
CTGAAATCACGAAGACGAACGAATATCCTTTGCTGCAAAACGCCTCTTGG
TGCTTCCAGGTAGGCAAAGGAAATGAAAATGACGCACGGCGCTCCTTCAT
GGGGTCCGCGCCGCAATCAACACCTGATTGAACCGAGGGCACTTCTGACT
ACTGACGACTCCCTTTTTGCATTATTAGCGTGAACCCCTCCCTTTGAATC
ATCGCTGTCGGCATATCGTTGTCGACGTCTGCCCTTGGTTTCACTTGTTG
CTGCGATACCCTTGCTGTACGGCCTTCAGGATCTGGAGGGTCTGCTGTAC
GAGAACGTGCCTCCGGACACGAAGGACTCCAACGGTAACTCGCTTCTACT
TCTGGCTGCCCAACAGGTAAGTGCCCACACGAGTACGCTCTCCTGGTATC
AATCCGTATTCTGTATAGCCTTGTCTGCCTCTTCTTTCAGCCTTCGCCCG
CGGTCTCGTTCCCTTCTTTTGGTATGTACCTTAAATCGATCCCGCGGGCT
GACAGGGAGTATGTACCTTATGTTGATCCGGCGGGCTAACGGAGGGAGAA
GGGCGTTACCCTCAGAGACCCCCAAACAGTCCTCCCTGCCCTACAAAACC
GTTCGTTGGGCGACGAAAGGTCGCAACTCTTTTCAGACAGCAGGCGCGAG
GATGAACACCACCCCCCCCCGTCTCCTCCCGCCACCTCTGGTATGAATGT
TCAGCACCCCCCCCCTCCCCCGCGCGTGTAGTCTATTCGAAGGCCCCCAC
ACATTATCTCAACCATCGTCTCCACGTCCATTCAACATGTGCCTTGCCTT
CTTGCTACGATCATTATACTTCGGTCTATTTTGGGCGAAGAGCATGGTCC
ACTTCTGGCTTTTTTATTTCATTCCGGTCGGTAAAGAACGAGCCAGAACA
CTCACTATGGTCAAAGTACGTACGTACGCCTATGATACCCACCCAATTTC
ATGTGTGTCACGTCCGAAACAACGCAGGGAAACAAACGAATAATGAAGTT
CCTTCTGCGGAAGGGCGCGACGATGAACCTCCAAAACCTGGACGGAAACA
CGGTGCTTCACTTCTGCTACTCCCAGGGCCGCCAGGCAAGATGCGTGATG
TACTATCGTGGCTGCTGCTGTTTTCTGTTGTAACGAGAGACAGACAGAGA
CAGAGACAGGGAAAGAGAAAGCCACGCAGACAGACAGGCATGTTTGGGGG
TACCCGGTCTTCCCACAAATAAGGTAGACAGACAGACAGACAGACAGCAG
TGGCCGAGGCAAGCCAGCAGAGGCAGAAAGAGTGTAATAATGCCAATACT
TCGTGCCCACGTTCAGCGCGCATCATGCTGCGGCAAACCCCTCAGGCAGA
TATGATCAACTACTTGCGTATGAGGCTCTAACGACGTTATGATGTACCCC
ATGCAGTCGGGAAAAAAAAAGGATGAGGGGCCACGGATCTAGTCGTCAAT
GCGTTGTACTGTATGTACCCTTGAGAGTCAAATCGAAAAAGCTACTTCGT
ATACACTACTGCGTCCCCACCGTTGCCCGCCCCGTGTCCTCCCCTGCCTT
TCAGCACACGTACCTCACGCTAGCCCCGAAGCGATTTATCCGTCCTATGT
TTATTGAGGGGCTCCAACTTTTGTTGTAAAACGCCCGCGTCGAGCAAACA
CACATTTATCATCCACCCATAGTTTCATACTCCAAAGACGTCTCAGTAGC
ATTCGTATACACGACCAGCATCCAGCGGGGTGGCACGTACTGTCCGTCCG
TACTCCTTTTCCAAATTGTGACACTTGACGCAGTGTGTACTCCCTTTCCC
CACGCGGCATTGATCATACGTGCGAGAATGGTCTTAAAACAATGGCTTTG
TTGCCTTTTATATTTTTGTTTGTCCACTTTATGGTTCCAGGATCTGGCGG
ACTACCTCAAGGCCAAGGGCGCGGACGATTCCTTGCTCAACAGCGAGGGC
TGTACGTGCTACGAGGGGCTTCAGGCAGATCGGGTCGCAAATATATAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig131:169699..176796+

>mRNA_P-littoralis_Contig131.24.1 ID=mRNA_P-littoralis_Contig131.24.1|Name=mRNA_P-littoralis_Contig131.24.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1728bp|location=Sequence derived from alignment at P-littoralis_Contig131:169699..176796+ (Pylaiella littoralis U1_48)
GCCAAGGTGGACATCGGCAAGGCACAGCTTGCTAACAGGAGGGCGAGGGA
GGACGCAGCGGTTCGCTCATTGGCGAGAAAGAGGGATGCTCAGCACCTGA
AAATTTCGTCCGGCGCCAACCGGAGTCGGCATAAGTGGGAAGTGCGACTG
CAGGACTCGCACCTCTTGGAAAGCCGGGGCTCCTGGGAAAAACGAAAAGA
TTCGGGAGGTAGCGTATTCTACTACTGCTTGTCGGAGGAGGGCCTCCCGG
AACCGTTCAGCTGGGACCCTCCAGAGTGTTGGGACGCCATGGATCCCTCC
GTGTTGGCGTTGGCGGAGGCAGCAGCAGCAGCAGCAGAGGAAGGGTCCAG
CATTGGGGGGGGTGGAAGCGAAGCGGAAGGTCCTCTCACGGACCAACTCT
CTAGCTTTCGTTTGCTAGAGCTTGCCCCGGGCCAGCAAGAACAACAAGGT
GACGACGGCGTTAACAACAACAGCAGCAGTAGTGGTAAGGAGAAACAGCA
GCACGACGATTTCACTACCCCTCGGCCCCTCACGGAGGAGGAAAAGCTTT
CCTTGGCGGTTACGCGCCTCGCCGAGAACGAGAATCTCTTGGGGGCTCTG
GCGTGGCGGCTGGGGATACCGCTGGCCGACGTCCGACCCGACGGGAGAGA
GCCACCCCTAGCCCGAGATCGTGGTGAGGACGAGGAGGAGCTGGACGAAA
ACAGGGAGAAAATCGAGCTGCTAGACCACGACGACGCCTCGGATAGCGAT
GGCGAGAGGGGCGACGCGAGAGACCCACCGGGACCGATGCCTCAAGACCA
CTCCGACCTCCGTCGCATCCGAATTGCAGAGCGAAGAAGAAAGTCTCAGG
TGGCAGAGGGCTACGGGCACAAACAGCCCAAGCGTCAGTCCATTGTGCCG
AGGCTGCCCATTGCCGAGGCACCGCACGACGGTGGCGCCGCGAGTTTAGG
GGGCGAGGTTGGGGGACTGGGGTGGAGGCGGCTTGCGAGAGCAGACCTCG
GGCAGAAGTTCTTAGAGAGGGTTGTGAACCCCAGGATGCAAGGACCGGCG
CCAGAGGCCGTCAACACTCGCCCCAAGCCGCGCCCCACGTCCACCACGGA
CCCTTCCAAGGCCACGAAGCATTTCGAGGAGTGGTCCATGCCGGTGGAAA
CCATGTTCATCGCGGACGTCGTGCAAGAGCACGCCAGGGTTTTGGAGGAG
GCGGAGAGGCGTTTAAGGCAAGAGGAGCTGCTCGACGACAGTTCGTTGGG
GCCGTTCGACCCGGCCTCATTCTCCGCCAATGGCCCGCAGGAATTCACGA
CGATGGAAAGGCGAATGATGGCGCTGGCGGAGAACGACGGGCGAAGCAAG
GAGGAAGTCGAGGAGGAAGAGAAAAAGGCCAAGGCCGTCATTGCCGCAAA
GACGGGCAACCTTCCGGATCTGGAGGGTCTGCTGTACGAGAACGTGCCTC
CGGACACGAAGGACTCCAACGGTAACTCGCTTCTACTTCTGGCTGCCCAA
CAGGGAAACAAACGAATAATGAAGTTCCTTCTGCGGAAGGGCGCGACGAT
GAACCTCCAAAACCTGGACGGAAACACGGTGCTTCACTTCTGCTACTCCC
AGGGCCGCCAGGCAAGATGCGATCTGGCGGACTACCTCAAGGCCAAGGGC
GCGGACGATTCCTTGCTCAACAGCGAGGGCTGTACGTGCTACGAGGGGCT
TCAGGCAGATCGGGTCGCAAATATATAG
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