mRNA_P-littoralis_Contig131.1.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig131.1.1
Unique NamemRNA_P-littoralis_Contig131.1.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig131.1.1 vs. uniprot
Match: D8LM69_ECTSI (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM69_ECTSI)

HSP 1 Score: 449 bits (1156), Expect = 1.010e-152
Identity = 215/235 (91.49%), Postives = 226/235 (96.17%), Query Frame = 3 
Query:  450 MMAEECILVDANDKPTGSASKVETHLTSKGLLLHRAFSVFLFDKEGRVLMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDNYASVGDAAVTGATRAAVRKLGQELGIPAAQLPLEDFSFLTKVHYIANSGTTWGEHEIDYVYLIQADVDLDPNPNEVSDAVFLGKEGLRSLLAEAERGEVEFTPWSAYIIDKFVFGWWDHVGDKEKLASFRDNVIHRVGSCADEEE 1154
            MMAEECILVD ND+PTGSASKVETHLTSKGLLLHRAFSVFLFDK+GRVLMQRRADSKHTFAG+WTNTCCSHPLWNDVEMGTD+TTP+G+  AS GDAA+ GATRAAVRKLGQELGIPAAQLPLEDFSFLTKVHYIANSG+TWGEHEIDYVYLIQADVDL+PNPNEVSDA FL K+GLRSLLA AERGEVEFTPWSAYIIDKFVFGWWDHVGDKEKLAS RD+VIHRVGSCADEEE
Sbjct:    1 MMAEECILVDRNDRPTGSASKVETHLTSKGLLLHRAFSVFLFDKKGRVLMQRRADSKHTFAGYWTNTCCSHPLWNDVEMGTDMTTPRGEKSASEGDAAIAGATRAAVRKLGQELGIPAAQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVYLIQADVDLEPNPNEVSDAEFLDKDGLRSLLARAERGEVEFTPWSAYIIDKFVFGWWDHVGDKEKLASLRDSVIHRVGSCADEEE 235
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BLAST of mRNA_P-littoralis_Contig131.1.1 vs. uniprot
Match: A0A835Z702_9STRA (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z702_9STRA)

HSP 1 Score: 290 bits (742), Expect = 1.120e-89
Identity = 142/247 (57.49%), Postives = 176/247 (71.26%), Query Frame = 3 
Query:  408 FAEELGVLDEEQAAMMAEECILVDANDKPTGSASKVETHLTSKGLLLHRAFSVFLFDKEGRVLMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGD-NYASVGDAAVTGATRAAVRKLGQELGIPAAQLPLEDFSFLTKVHYIANSGT-TWGEHEIDYVYLIQADVDLDPNPNEVSDAVFLGKEGLRSLLAEAERGEVEFTPWSAYIIDKFVFGWWDHVGDKEKLASFRDNVIHRVGSCA 1142
            F +ELG +D EQAAMM E CI+VD +DKP   A+KV+ HL S+GL LHRAFSVFLFD  GR+L+QRRA SKHTF G+WTN CCSHPLWND EMG D     GD + +S  +AA  GA RAA RKL QELG+PA QLP      +T++HY A S    WGEHE+DY++L QADVD+ PN NEV++A ++ +  LR+LLA A+ G+  FTPWS ++ID F   WWD +G+   L +  D VIHRVG CA
Sbjct:   55 FTDELGQIDPEQAAMMEELCIVVDRDDKPLAPATKVQAHLCSEGLALHRAFSVFLFDSSGRMLLQRRALSKHTFPGYWTNACCSHPLWNDFEMGLD-----GDADSSSALEAAARGARRAAARKLEQELGVPAGQLPESALRLMTRIHYRAESEDGVWGEHEVDYIFLAQADVDVAPNANEVAEAAYVTRAELRALLARADAGDARFTPWSRHVIDAFAHAWWDALGNAAALDALADEVIHRVGDCA 296
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BLAST of mRNA_P-littoralis_Contig131.1.1 vs. uniprot
Match: A0A7S2UUE2_9STRA (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUE2_9STRA)

HSP 1 Score: 262 bits (669), Expect = 2.100e-78
Identity = 133/246 (54.07%), Postives = 171/246 (69.51%), Query Frame = 3 
Query:  420 LGVLDEEQAAMMAEECILVDANDKPTGSASKVETHLTSKGLLLHRAFSVFLFDKEGRVLMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDNYASVGDAAVTGATRAAVRKLGQELGIPAAQLPLEDFSFLTKVHYIANSGTTWGEHEIDYVYLIQADVDLDPNPNEVSDAV-FLGKEGLRSLLAEAERGEVEFTPWSAYIIDKFVFGWWDHVGDKEKLASFRDN--VIHRVGSCADE 1148
            +G  D+EQ  MM E  I VD +DK  G ASK ETHL S GL LHRAFSVFLFD +GR+L+Q+R+  K TF  +WTNTCCSHPL    E+GTD+      N      AA  G  RAA+RKL QELGI  ++L ++DF +LTK+HYIANS   WGEHE+DYV+  Q DV+L+ N NEV D V ++  + LR ++ +A+RGE++ TPWS YIID+F+F WW  VGD++ L +  D+  VIHRVG CA+E
Sbjct:   69 VGQYDDEQIQMMEERVITVDRHDKVVGEASKAETHLVSHGLKLHRAFSVFLFDTQGRLLLQQRSRDKITFPWYWTNTCCSHPLSVPSELGTDVLEAGTHNQDQ---AATLGCQRAAIRKLEQELGISPSELSVDDFIYLTKIHYIANSDPDWGEHEVDYVFFAQKDVNLNLNLNEVEDVVKYVTADELRDMMDQADRGEIKLTPWSRYIIDEFIFKWWPLVGDRKALEAQADDFSVIHRVGPCAEE 311
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BLAST of mRNA_P-littoralis_Contig131.1.1 vs. uniprot
Match: A0A0E9NIV4_SAICN (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NIV4_SAICN)

HSP 1 Score: 223 bits (569), Expect = 5.930e-65
Identity = 114/236 (48.31%), Postives = 153/236 (64.83%), Query Frame = 3 
Query:  432 DEEQAAMMAEECILVDANDKPTGSASKVETHLTSK--GLLLHRAFSVFLFDKEGRVLMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDNYASVGDAAVTGATRAAVRKLGQELGIPAAQLPLEDFSFLTKVHYIANSGTTWGEHEIDYVYLIQADVDLDPNPNEVSDAVFLGKEGLRSLLAEAERGEVEFTPWSAYIIDKFVFGWWDHVGDKEKLASFRDNV-IHRV 1130
            D EQ  +M E CI++D NDKP GSASK   HL       LLHRAFSVFLFD+E R+L+Q+RAD K TF G WTNTCCSHPL    E G+DL             +AV G  RAA+RKL QELGIPA+Q+P++ F++LT++HY+A S   WGEHEIDY+  I+  V    NPNE+ D  ++ +E ++S+  +    E +FTPW   I + F+F WW  + +K+ LA+ +D   IH++
Sbjct:   18 DPEQVKLMEEVCIVIDENDKPLGSASKKTCHLMENINNNLLHRAFSVFLFDEENRLLLQQRADEKITFPGMWTNTCCSHPLSIPSETGSDL------------PSAVLGVKRAAIRKLDQELGIPASQVPIDKFTYLTRIHYVAPSDGLWGEHEIDYILFIRVPVTHAANPNEIKDVKYVSREEMQSMFVDPAY-EGKFTPWFKLICETFLFKWWKELEEKDDLAAVKDEENIHKL 240
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BLAST of mRNA_P-littoralis_Contig131.1.1 vs. uniprot
Match: A0A1Y2CTN6_9FUNG (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CTN6_9FUNG)

HSP 1 Score: 221 bits (564), Expect = 2.030e-64
Identity = 116/236 (49.15%), Postives = 154/236 (65.25%), Query Frame = 3 
Query:  432 DEEQAAMMAEECILVDANDKPTGSASKVETHLTS---KGLLLHRAFSVFLFDKEGRVLMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDNYASVGDAAVTGATRAAVRKLGQELGIPAAQLPLEDFSFLTKVHYIANSGTTWGEHEIDYVYLIQADVDLDPNPNEVSDAVFLGKEGLRSLLAEAERGEVEFTPWSAYIIDKFVFGWWDHVGDKEKLASFRDNVIHRV 1130
            DEEQ  +M+E CILVD NDKP G+ SK E HL +   KGLL HRAFSVFLF+ EG++L+Q+RAD K TF G++TNTCCSHPL    E               V +A   GA RAA RKL  ELGI A Q+PL+ F FLTK+ Y+A S   WGEHEIDY++ ++ADVDL+PNPNEV    ++ ++ L+ + A  ++  +  TPW   I + F++ WWD++ +   LA    +VIHR+
Sbjct:   10 DEEQVRLMSEMCILVDTNDKPIGAESKKECHLMTNINKGLL-HRAFSVFLFNSEGKLLLQQRADEKITFPGYYTNTCCSHPLAVQDE---------------VEEAEQIGARRAAQRKLEHELGIKAEQVPLDKFQFLTKIQYLAPSDGLWGEHEIDYIFFVKADVDLEPNPNEVKSVKYITQDELKQMFATMDQTGISMTPWFKLICENFLYKWWDNLDNVTSLAE--PDVIHRM 227
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BLAST of mRNA_P-littoralis_Contig131.1.1 vs. uniprot
Match: A0A2B7XXX0_9EURO (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Polytolypa hystricis UAMH7299 TaxID=1447883 RepID=A0A2B7XXX0_9EURO)

HSP 1 Score: 221 bits (564), Expect = 7.000e-64
Identity = 120/240 (50.00%), Postives = 149/240 (62.08%), Query Frame = 3 
Query:  417 ELGVLDEEQAAMMAEECILVDANDKPTGSASKVETHLTSK--GLLLHRAFSVFLFDKEGRVLMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDNYASVGDAAVTGATRAAVRKLGQELGIPAAQLPLEDFSFLTKVHYIANSGTTWGEHEIDYVYLIQADVDLDPNPNEVSDAVFLGKEGLRSLLAEAERGEVEFTPWSAYIIDKFVFGWWDHVGDKEKLASFRDNVIHRV 1130
            +L   DEEQ  MM E CI++D ND+P GSASK   HL +     LLHRAFSVFLFDK+ ++L+Q+RA  K TF   WTNTCCSHPL    E GT L            D AV G  RAAVRKL QELGI A Q+PLE F FLT++HY A S   WGEHEIDY+  IQADV+L  NPNEV D+ ++  + L+ +  E     ++FTPW   I + F+F WW  +G +E      D  +HR+
Sbjct:   42 DLDGYDEEQIRMMEEMCIVLDDNDQPIGSASKKTCHLMTNIDRDLLHRAFSVFLFDKDNKLLLQQRATEKITFPDMWTNTCCSHPLGIPGETGTGL------------DEAVEGVRRAAVRKLDQELGIKAEQIPLEKFEFLTRIHYKAPSDGKWGEHEIDYILFIQADVELTINPNEVRDSTWVSADELKKMFEEPG---LKFTPWFKLICNTFLFDWWSKLGTEEFEKFKNDRTLHRM 266
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BLAST of mRNA_P-littoralis_Contig131.1.1 vs. uniprot
Match: A0A7C8PEN1_ORBOL (Isopentenyl-diphosphate Delta-isomerase n=8 Tax=Orbiliaceae TaxID=47021 RepID=A0A7C8PEN1_ORBOL)

HSP 1 Score: 222 bits (565), Expect = 3.680e-63
Identity = 121/239 (50.63%), Postives = 149/239 (62.34%), Query Frame = 3 
Query:  405 AFAEELGVLDEEQAAMMAEECILVDANDKPTGSASKVETHLTS---KGLLLHRAFSVFLFDKEGRVLMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDNYASVGDAAVTGATRAAVRKLGQELGIPAAQLPLEDFSFLTKVHYIANSGTTWGEHEIDYVYLIQADVDLDPNPNEVSDAVFLGKEGLRSLLAEAERGEVEFTPWSAYIIDKFVFGWWDHVGDKEKLASFRD 1112
            A + EL   D EQ  +M E CI++D +DKP GSASK   HL +   KGLL HRAFSVFLFD EGR+L+Q+RAD K TF G WTNTCCSHPL    E G  L            +AA+ G  RAA RKL QELGIPA Q+PL+DF FLT++HY A S   WGEHEIDY+  IQ  VDL PNPNEV D  ++  + L+ +  +     + FTPW   I +  +F WW  + D  K A+ +D
Sbjct:  106 ARSSELEGYDAEQVRLMDEVCIVLDEDDKPIGSASKKTCHLMANIDKGLL-HRAFSVFLFDPEGRLLLQQRADEKITFPGLWTNTCCSHPLGIPGETGDTL------------EAAIVGVRRAAQRKLDQELGIPAKQVPLDDFEFLTRIHYKAPSNGIWGEHEIDYILFIQTTVDLAPNPNEVKDTKYVTADELKEMFQDPA---LSFTPWFKLICETMLFEWWGSLKDLSKYANEQD 328
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BLAST of mRNA_P-littoralis_Contig131.1.1 vs. uniprot
Match: B8MES9_TALSN (Isopentenyl-diphosphate Delta-isomerase n=7 Tax=Eurotiales TaxID=5042 RepID=B8MES9_TALSN)

HSP 1 Score: 219 bits (559), Expect = 4.370e-63
Identity = 119/241 (49.38%), Postives = 151/241 (62.66%), Query Frame = 3 
Query:  417 ELGVLDEEQAAMMAEECILVDANDKPTGSASKVETHLT---SKGLLLHRAFSVFLFDKEGRVLMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDNYASVGDAAVTGATRAAVRKLGQELGIPAAQLPLEDFSFLTKVHYIANSGTTWGEHEIDYVYLIQADVDLDPNPNEVSDAVFLGKEGLRSLLAEAERGEVEFTPWSAYIIDKFVFGWWDHVGDKEKLASFRDNVIHRV 1130
            +L   DEEQ  +M E CI++D +D+P GSASK   HL    S+GLL HRAFSVFLFD + R+L+Q+RA  K TF   WTNTCCSHPL    E G +L+            AAV G  RAAVRKL QELGI A Q+PL+ F FLT++HY+A S   WGEHEIDY+  IQADVD++PNPNEV D  ++  E L+S+ A      ++FTPW   I +  +F WW H G +       +  I R+
Sbjct:   47 DLDGYDEEQVRLMEEVCIVLDNDDRPIGSASKKACHLMTNISRGLL-HRAFSVFLFDSQNRLLLQQRAAEKITFPDLWTNTCCSHPLGIAGETGAELS------------AAVEGVKRAAVRKLDQELGIKAEQVPLDKFKFLTRIHYLAPSDGKWGEHEIDYILFIQADVDINPNPNEVQDTKYVTPEDLKSMFANPA---LKFTPWFKLICNTMLFEWWSHFGTETFDKYLLEKEIRRM 271
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BLAST of mRNA_P-littoralis_Contig131.1.1 vs. uniprot
Match: S8A058_DACHA (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Dactylellina haptotyla (strain CBS 200.50) TaxID=1284197 RepID=S8A058_DACHA)

HSP 1 Score: 221 bits (563), Expect = 5.520e-63
Identity = 132/298 (44.30%), Postives = 170/298 (57.05%), Query Frame = 3 
Query:  405 AFAEELGVLDEEQAAMMAEECILVDANDKPTGSASKVETHLTS---KGLLLHRAFSVFLFDKEGRVLMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDNYASVGDAAVTGATRAAVRKLGQELGIPAAQLPLEDFSFLTKVHYIANSGTTWGEHEIDYVYLIQADVDLDPNPNEVSDAVFLGKEGLRSLLAEAERGEVEFTPWSAYIIDKFVFGWWDHVGDKEKLASFRDNVIHRVGSCADEEE*WILEGGRRWGGGRLGFPA---PSPPAAALQLELE*RKHRPPRGD 1280
            A + EL   D EQ  +M E CI++D NDKP GSASK   HL +   KGLL HRAFSVFLFD EGR+L+Q+RAD K TF G WTNTCCSHPL    E G  L            +AA+ G  RAA RKL QELGI + Q+PL+ F FLT++HY A S   WGEHEIDY+  IQ  VD++PNPNEV D  ++  + L+ +  + +   + FTPW   I +  +F WW  + D  K A+  +  I R+   A   + W+          R+  P     +  A  L LE   RK++P R D
Sbjct:   42 AQSSELEGYDAEQVRLMDEVCIVLDENDKPIGSASKKTCHLMANIDKGLL-HRAFSVFLFDPEGRLLLQQRADEKITFPGLWTNTCCSHPLGIPGETGDTL------------EAAIVGVRRAAQRKLDQELGIASKQVPLDKFEFLTRIHYKAPSDGLWGEHEIDYILFIQTTVDVNPNPNEVKDTKYVTADELKQMFQDPK---LSFTPWFKLICETMLFEWWGSLKDLSKYAN--EQEIRRIPRPAASLDGWLS---------RMHLPPFTKGNRNATWLSLENTSRKNQPQRAD 312
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BLAST of mRNA_P-littoralis_Contig131.1.1 vs. uniprot
Match: C1GZL6_PARBA (Isopentenyl-diphosphate Delta-isomerase n=5 Tax=Paracoccidioides TaxID=38946 RepID=C1GZL6_PARBA)

HSP 1 Score: 217 bits (553), Expect = 3.370e-62
Identity = 119/243 (48.97%), Postives = 149/243 (61.32%), Query Frame = 3 
Query:  411 AEELGVLDEEQAAMMAEECILVDANDKPTGSASKVETHLTS---KGLLLHRAFSVFLFDKEGRVLMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDNYASVGDAAVTGATRAAVRKLGQELGIPAAQLPLEDFSFLTKVHYIANSGTTWGEHEIDYVYLIQADVDLDPNPNEVSDAVFLGKEGLRSLLAEAERGEVEFTPWSAYIIDKFVFGWWDHVGDKEKLASFRDNVIHRV 1130
            +++L   D EQ  +M E CI++D ND+P GSASK   HL S   +GLL HRAFSVFLFD   R+L+Q+RA  K TF   WTNTCCSHPL    E G               +AAV G  RAA RKL  ELGI A Q+PLE F FLT++HY+A S   WGEHEIDY+  IQADVDLD  PNEV D  ++  E L+ +  E E   ++FTPW   I +  +F WW+  G KE      D+++HR+
Sbjct:   45 SDDLEGYDVEQIRLMDEVCIVLDENDQPIGSASKKTCHLKSNIDRGLL-HRAFSVFLFDSNKRLLLQQRASEKITFPDMWTNTCCSHPLSIPGESGVKF------------EAAVQGVKRAAQRKLNHELGIKAEQVPLEKFDFLTRIHYLAPSDGKWGEHEIDYILFIQADVDLDVRPNEVRDTRYVTAEELKQMFQEPE---LKFTPWFKLICNSLLFNWWEKFGTKEFEQHKGDSMLHRM 271
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig131.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM69_ECTSI1.010e-15291.49Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Ec... [more]
A0A835Z702_9STRA1.120e-8957.49Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Tr... [more]
A0A7S2UUE2_9STRA2.100e-7854.07Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Fi... [more]
A0A0E9NIV4_SAICN5.930e-6548.31Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Sa... [more]
A0A1Y2CTN6_9FUNG2.030e-6449.15Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Rh... [more]
A0A2B7XXX0_9EURO7.000e-6450.00Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Po... [more]
A0A7C8PEN1_ORBOL3.680e-6350.63Isopentenyl-diphosphate Delta-isomerase n=8 Tax=Or... [more]
B8MES9_TALSN4.370e-6349.38Isopentenyl-diphosphate Delta-isomerase n=7 Tax=Eu... [more]
S8A058_DACHA5.520e-6344.30Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Da... [more]
C1GZL6_PARBA3.370e-6248.97Isopentenyl-diphosphate Delta-isomerase n=5 Tax=Pa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig131contigP-littoralis_Contig131:6540..12042 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LM69
Preferred nameIDI1
PFAMsNUDIX
Model size1990
Max annot lvl2759|Eukaryota
KEGG rclassRC00455
KEGG koko:K01823,ko:K21773
KEGG ReactionR01123
KEGG Pathwayko00900,ko01100,ko01110,ko01130,ko04218,map00900,map01100,map01110,map01130,map04218
KEGG ModuleM00095,M00096,M00364,M00365,M00366,M00367
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000287,GO:0003006,GO:0003674,GO:0003824,GO:0004452,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005777,GO:0005829,GO:0006066,GO:0006629,GO:0006644,GO:0006694,GO:0006695,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0007275,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009507,GO:0009536,GO:0009791,GO:0009889,GO:0009890,GO:0009892,GO:0009908,GO:0009987,GO:0010033,GO:0010894,GO:0014070,GO:0016114,GO:0016125,GO:0016126,GO:0016853,GO:0016860,GO:0016863,GO:0019216,GO:0019218,GO:0019222,GO:0019637,GO:0022414,GO:0030145,GO:0032501,GO:0032502,GO:0035634,GO:0042221,GO:0042579,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045337,GO:0045338,GO:0045540,GO:0045541,GO:0045833,GO:0045939,GO:0046165,GO:0046490,GO:0046872,GO:0046890,GO:0046914,GO:0048367,GO:0048519,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050810,GO:0050896,GO:0051055,GO:0061458,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0080090,GO:0090181,GO:0090206,GO:0090407,GO:0090567,GO:0106118,GO:0106119,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1902930,GO:1902931
Exons6
Evalue1.34e-157
EggNOG OGsCOG1443@1|root,KOG0142@2759|Eukaryota
Ec32 ortholog descriptionisopentenyl-diphosphate delta-isomerase type 1
Ec32 orthologEc-18_002690.1
EC5.3.3.2
Descriptionisopentenyl-diphosphate delta-isomerase activity
Cds size1113
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig131.1.1prot_P-littoralis_Contig131.1.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig131 6584..11209 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789595.8273342-UTR-P-littoralis_Contig131:6539..65831680789595.8273342-UTR-P-littoralis_Contig131:6539..6583Pylaiella littoralis U1_48UTRP-littoralis_Contig131 6540..6583 +
1680789595.923887-UTR-P-littoralis_Contig131:11209..120421680789595.923887-UTR-P-littoralis_Contig131:11209..12042Pylaiella littoralis U1_48UTRP-littoralis_Contig131 11210..12042 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789595.8463087-CDS-P-littoralis_Contig131:6583..67881680789595.8463087-CDS-P-littoralis_Contig131:6583..6788Pylaiella littoralis U1_48CDSP-littoralis_Contig131 6584..6788 +
1680789595.8572538-CDS-P-littoralis_Contig131:8055..83181680789595.8572538-CDS-P-littoralis_Contig131:8055..8318Pylaiella littoralis U1_48CDSP-littoralis_Contig131 8056..8318 +
1680789595.867362-CDS-P-littoralis_Contig131:8869..90151680789595.867362-CDS-P-littoralis_Contig131:8869..9015Pylaiella littoralis U1_48CDSP-littoralis_Contig131 8870..9015 +
1680789595.8789668-CDS-P-littoralis_Contig131:9420..96041680789595.8789668-CDS-P-littoralis_Contig131:9420..9604Pylaiella littoralis U1_48CDSP-littoralis_Contig131 9421..9604 +
1680789595.8964024-CDS-P-littoralis_Contig131:10391..104931680789595.8964024-CDS-P-littoralis_Contig131:10391..10493Pylaiella littoralis U1_48CDSP-littoralis_Contig131 10392..10493 +
1680789595.909361-CDS-P-littoralis_Contig131:10996..112091680789595.909361-CDS-P-littoralis_Contig131:10996..11209Pylaiella littoralis U1_48CDSP-littoralis_Contig131 10997..11209 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig131.1.1

>prot_P-littoralis_Contig131.1.1 ID=prot_P-littoralis_Contig131.1.1|Name=mRNA_P-littoralis_Contig131.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=371bp
MLLSRSALASVLAVLLFVTACPAAGFFLPGSQSFSAGHSPALQQEQHDAI
SPRTRGGARLSASSTNEVETRPPGLPLSRRRRRPEHRNNNAQRRTACTLG
ASASASASTAAAAAAAATAGAFAEELGVLDEEQAAMMAEECILVDANDKP
TGSASKVETHLTSKGLLLHRAFSVFLFDKEGRVLMQRRADSKHTFAGFWT
NTCCSHPLWNDVEMGTDLTTPKGDNYASVGDAAVTGATRAAVRKLGQELG
IPAAQLPLEDFSFLTKVHYIANSGTTWGEHEIDYVYLIQADVDLDPNPNE
VSDAVFLGKEGLRSLLAEAERGEVEFTPWSAYIIDKFVFGWWDHVGDKEK
LASFRDNVIHRVGSCADEEE*
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mRNA from alignment at P-littoralis_Contig131:6540..12042+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig131.1.1 ID=mRNA_P-littoralis_Contig131.1.1|Name=mRNA_P-littoralis_Contig131.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5503bp|location=Sequence derived from alignment at P-littoralis_Contig131:6540..12042+ (Pylaiella littoralis U1_48)
GTCGCCGAGTGTGTGTGCCCCACCACCCAAATTAAGGAGAGAGGATGCTG
CTCTCACGAAGTGCACTTGCCAGTGTTCTGGCCGTACTACTGTTCGTGAC
TGCCTGCCCCGCGGCAGGCTTCTTCTTGCCGGGCTCGCAATCATTCTCGG
CAGGACACTCGCCCGCTCTGCAGCAGGAGCAACATGATGCGATATCGCCG
AGAACAAGAGGAGGGGCACGTCTCTCCGCTTCGTCCACCAATGAAGTAGG
TGCGAATGGCTGGTGTGTCTGAATGTACGTGCGTGCAGTTTCTCTTTGCT
TCCGTGTATCTCTTTGTACAGTACACATGTGCTCTCGATTTTGCAATTCT
GTCTACTGGCATACCTTGTATTCTTCGTATGTAAGGAGTATGTGTAACCG
CGTGTGATCTGCACATACAACAGCAGCGCTGCCGGTGCCGAACCTTGTGC
AGTAATTGTTCAACCTAAGGCATGCTCATCAGCATACAGATACACGACGG
CGGTACAGCAGCACTACCGCGGCGGGGTGAACCGCCAGTAGCCAATGGGA
TGCCTCCAAAGCATATTCCGGGTGATAAAGGCGATACTGCATCTACATAC
TCGCATGATACGAAAGGTGTCGCCTGCGGTCGGATCAAAACTTGGCTCCG
GTAAATACGCTCAACAAATCTACAGCCGGCGACAGGACAGCAGCATATTT
GTATGATGCATATTTCGTGTAAATACTACAGTAAATAGGTGCTGCTGTAT
CATCATTCGTACCTGGTACTCGTATCATACAGAGTATACACCTCCAACAA
TTGCATGGCCAGATCCACAGAAGCTCCATGTTAATTAGCCCCAGGGCAGC
AGAAGCACTGGTGTTTGCTTACCGTATTCCCTTGGGGTACAAGGTACATG
TCTTTCCCATAAACCGAGTGTACCCAATTTCTCATCACGGGGCTTGCTCT
GCTGCTGTACATATTTTACCGGTATCCAGGTGCGGTCTGGTCTGTACATC
TCATCTCTCTCTCTCTCTCTCTTTCTCTCTTTCTCTCTCTCTTCCTCCAC
CGCCCCATGATTGCAAAGCAACTGCTGCCTCTGGAACATGATATGCACGA
TATGATACCGTAATCATGCGAGTCATCGCACCCCCGTGTTAGCTTTTTTG
CATTCCGTATTGCTCCATAACCAGGAGAGTGCGAACACCAAACGACCCGT
CATACGAAAGCTCTCGACGAGGTCTTTCCAAAACCACCCTTTTCGGCAGT
GGTACTCTCCTGGTTGTGGAGCAATACGGAATGCAAAAAAGCTAACACGG
GGGTGCGATGACTCGCATGATTACGGTGCACGAAAATATCGGACCGCTGT
ATCGCAGGTGCCATGGACTCCGCGTTTTGTCCTGTCACGCGCAGCAACAC
GAGGCAGACAGGTTGACGACTACGCTGCTGTACCGCAGGTAAAAAACATG
TGCTGCGCATACTTTGTAGCTCTCAAATCCTCTTCCCCGATGCACGCTGA
CTGTTGTGTGTTGCAGAAACGCGACCGCCGGGGCTTCCGCTCTCGCGCCG
AAGGCGACGGCCAGAGCACCGCAACAACAATGCACAGCGACGAACGGCGT
GCACCTTGGGAGCGTCGGCGTCAGCATCGGCATCAACGGCGGCGGCGGCG
GCGGCGGCGGCAACAGCGGGCGCATTCGCAGAGGAGCTGGGCGTGCTGGA
CGAGGAGCAGGCGGCCATGATGGCCGAGGAGTGCATCCTGGTGGACGCGA
ACGACAAGCCTACGGGCAGCGCTAGCAAGGTGGGACGGCAATGCTCGAAT
GCTCGAAGTACACAGCAATAGTAGCAATGGTTTGGTTGTACTGCATGAAC
TGTCTACGCGCTTTGTCGGGCTTCGGCGTTTGAGCGCGAGCGGGGTGAGT
GATGTACCATTGGTCAGTAACGCACGTCTTTACTTTTTCGAGATTCTCTA
GGTGTACTCACGGGCAGTAAGCACAAAACGTTCGTCCGGGAAACGGGTGT
TCGTATCATGTGTGCGCGTGCGTGTCTGGGCGTTTACCTGTTGGGCCGAT
GTAGGAGAAGAAGCTACGACATGATACGTGTGATAAATGTATTACTACAA
TATATACGAAAAACGCACTTTCCCTGTAACGAACTTTAACTTTACAACAT
ATCAAACATGATCGTGGCTCATCCATCACCGAATGAACGAAATTTGATTC
GCCTCCTTGGCGGCACCATCCTCAATTTTCACTTGTACGTTCTTGCGTGC
GCGCCCGTGCGTGCGTGCGTACTGCGTGCGTGTGTGTGTGTGGCGTATTG
CTCCAAAACGAACGGGACGGAACAAAAAAGGTGGAGACACACCTCACCAG
CAAGGGGTTGCTGCTGCACCGGGCCTTCTCTGTGTTCCTCTTCGACAAAG
AGGGGAGGGTCTTGATGCAAAGAAGGGCGGACTCCAAACACACCTTCGCG
GGTTTCTGGACCAACACGTGCTGCAGGTGTGTGCCCCGGCCGGCGGCACT
ACTTTACAGTACAGCAGTATTGCTGCTGTGTTTTTTGTTCCATACAGTAC
GTGAAATACATCCTCGCGGTTTTGATTCATCACAAGGCTCACTGCTGTAG
AGAGAGTTTTTTCTTTATAACAGAAGGATGATATGATATGCATGCGACGA
TGATCGCAAGGGCTGTTCCCACGTCGACTTCGGCACTGCCTACATACTTT
CGCGAGTGCCGTCGTTGGACCGTGATCGTCTTTCATGTTATCTCGTTTCT
TCCTGGTCCTCCCTCATTTCGACCGCCCAGCACCCAACCCCTCCGTCCCC
TCATCCCTGCACCCCCTGGACCCCCTGCTCCGCCCCAACTCCATCACCCC
ACGCTGGCGGCGTGATGTTGTCTACATGCAGCCACCCTCTTTGGAACGAC
GTCGAGATGGGGACGGACTTGACCACGCCCAAAGGCGACAACTACGCCAG
CGTGGGAGATGCCGCTGTCACAGGGGCGACTCGGGCGGCGGTGAGAAAGC
TGGGGCAGGAGCTGGGCATCCCTGCCGCTCAACTGCCGTTGGAAGACTTT
TCCTTCCTTACTAAGGTAGGCTTGTCTCGCGTGCGTTCGTGTGTCTTGTT
TCGTGTGTGTGGGTGTGCTTGTGTTCCTTTTTTGTGTGTGTTTTTGTGCG
TGGTCTCTGGTGTGTGCGTGTCTGTTTGTGTATGTGCGTGTGTTTTGCGT
TTGTGTATGTGCGTGTGTTTGTCTTCTGCGGGTTCATGGAGCCAGACAAA
GAGTTTTCTGCTGTTGTGTACGCACGTGTTTTGCGAATCATTTTTGGGCA
CTGCTGTACATCAGGTGCGGTATGGTTCTGAATACAGCGGTAGTTCGCGG
AGGTTCTTGAGATGTTTGGCGGCCTTGACATTCCAGCAACGACGAGGTTA
AGGGTCCGACCACTGCAAAAGTGTAAAATTGTCCTTCGAAGCAAGATATC
TCCGTTAGGTTGCTTTTAATATTTTAAAGTAATACGTTTTCAATATTTGA
TAATAGCAAATGAATTATACACACCGCTGTTCTCGCAACGGTCCCCTTCG
ACGGTGTTGCTCATGTCATTTTTGGATAACTCTATGTGTACCCCAGGGCT
GCGGCACCAGCAGTCACAGAAACGGAACGGTAGGGTCGCTAACAGGGTGA
AAAAGCTGCGCGACGACGTAGGCACTACCGTTTTATATGTTTGATGAAGC
CTCAGGTACGTAAGACTCTTGTCTAATGCTGCAATTAAGGTATTCCGATA
GCTTCTCCCCCCCCCCCAAACATTGCCGCCCTTTTGACCCCCGAAACGCC
TTTCTTCTGGCATTTCTCGCCATTCTACGGTTGTGCGACTGGAAAACCGT
AGGTGCACTACATCGCTAACTCGGGCACGACCTGGGGAGAGCACGAGATC
GACTACGTCTACTTGATACAGGCGGACGTTGACCTTGACCCCAACCCCAA
CGAGGTGCGCATTGGTTTCGCTGGTGTTTTTTTGTCTTACCGGAAGTAGG
GGTACACAGAGTGCGGCAAGGAGTGCTGCGTCGTCGTTGTCCAGACTTTG
CACCCTGTTGGCTATGCTACCGTTCCGTTGCTGTGACTCTTGGGGTTTAA
TTTGTCGTGTAAGGTCTCAGGAGGTCATGTCCAGGTTTGCATCATTCGTG
CACGTCGGGCCGAACTTTGCCGTTTTACCTCCGTTTTATCGGGGTTACTT
GGTACAGGGCATACTGTGCGTGACCACGGAGGCCGTTTATTTTGCTGACA
AGATGAGTAGTGGGTAGGTCGGGTGCAGAACGGCTAAACTGAAGATGACA
GCACCGTCGCCAGCATTTACATCGTTTTTTTGTTACAGAGTTGCCGATGT
TTTCTTTGTTGCTCACCTCGAAAGTTCGTCACACCCCGTACCCCTCCACT
TCTCCCCCCCCCCTCCCCGCCCCCGCCCCCACACCGTGACCTGAAATGGA
ACAACAGGTTTCCGACGCGGTTTTCTTAGGCAAGGAAGGATTGCGCTCGC
TCTTGGCGGAAGCCGAGCGAGGAGAGGTGGAGTTCACGCCATGGTCGGCT
TACATCATCGACAAGTTCGTTTTCGGTTGGTGGGACCACGTGGGTGACAA
GGAGAAGCTTGCGTCCTTCCGGGACAATGTCATTCACCGAGTCGGCTCGT
GTGCGGACGAGGAAGAATAGTGGATACTGGAGGGAGGGCGTCGGTGGGGG
GGGGGACGGCTTGGTTTCCCTGCCCCCTCTCCCCCGGCCGCCGCGCTTCA
ATTGGAGCTGGAGTGAAGAAAGCACCGACCTCCTCGGGGAGATTGGTGTC
CTTCCGTACGGTACCCCTGTACGCAATCTTGTTTCCTACAACAGCAGTGT
CGGAAGCGAAGGACCGGAAACGAGAAACGGGGGGTAGGTGGCGTGTGGTG
GTTTGGTCACCCTGACTTTCTGTTGTGTGGCAGGAGCTGTTGAGTTCACG
AGGGTCGTGCCTGTGTGCCGGGTGCGCAGTACTCTGTACTCTGGTCATGT
TGTCGTTTGGCCGCGCTCGTGCGCCCTGTTCCTTTTCATGCGATTTTTCG
GAGCAGAAACGTGGGCCCCGCTCGTGGCGTTATGTATAGACCAATGGAGG
AAGTGTGATTCCCGCATCAGGTTCGACTTTTGCTCCAGGCCACAAGTGCT
TTTTTCGTTGCATGTGTTCTCCATCCACGTCATGTTGTTTCATTTGGAAT
CCTTAACAACGAAGGGTTGAGTACGCTACACACGCGACGTATTTCATGAG
GGAGATAAATCGCTTTCTCATCATTGCTGCTGCACGGCGGTACACATTTG
CAGGAAATGAAGGGATGGTCTGCTCAGTGCAACGTGTACGCCTGAAAGCC
TCCCCCCACCCCCCCCCTCCCCTGAGTCCTGGCGGTCCTTTTTTGATATC
TAATCGCACCGGTGCCTGAGCTGCGAAGGAACGTTTTTGTTTTTGCTTTG
AAGAAGCGTTATTGTTTTTGCCTTCTGAAAAATCTTCGTATTTCTGAAAC
CGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig131:6540..12042+

>mRNA_P-littoralis_Contig131.1.1 ID=mRNA_P-littoralis_Contig131.1.1|Name=mRNA_P-littoralis_Contig131.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1113bp|location=Sequence derived from alignment at P-littoralis_Contig131:6540..12042+ (Pylaiella littoralis U1_48)
ATGCTGCTCTCACGAAGTGCACTTGCCAGTGTTCTGGCCGTACTACTGTT
CGTGACTGCCTGCCCCGCGGCAGGCTTCTTCTTGCCGGGCTCGCAATCAT
TCTCGGCAGGACACTCGCCCGCTCTGCAGCAGGAGCAACATGATGCGATA
TCGCCGAGAACAAGAGGAGGGGCACGTCTCTCCGCTTCGTCCACCAATGA
AGTAGAAACGCGACCGCCGGGGCTTCCGCTCTCGCGCCGAAGGCGACGGC
CAGAGCACCGCAACAACAATGCACAGCGACGAACGGCGTGCACCTTGGGA
GCGTCGGCGTCAGCATCGGCATCAACGGCGGCGGCGGCGGCGGCGGCGGC
AACAGCGGGCGCATTCGCAGAGGAGCTGGGCGTGCTGGACGAGGAGCAGG
CGGCCATGATGGCCGAGGAGTGCATCCTGGTGGACGCGAACGACAAGCCT
ACGGGCAGCGCTAGCAAGGTGGAGACACACCTCACCAGCAAGGGGTTGCT
GCTGCACCGGGCCTTCTCTGTGTTCCTCTTCGACAAAGAGGGGAGGGTCT
TGATGCAAAGAAGGGCGGACTCCAAACACACCTTCGCGGGTTTCTGGACC
AACACGTGCTGCAGCCACCCTCTTTGGAACGACGTCGAGATGGGGACGGA
CTTGACCACGCCCAAAGGCGACAACTACGCCAGCGTGGGAGATGCCGCTG
TCACAGGGGCGACTCGGGCGGCGGTGAGAAAGCTGGGGCAGGAGCTGGGC
ATCCCTGCCGCTCAACTGCCGTTGGAAGACTTTTCCTTCCTTACTAAGGT
GCACTACATCGCTAACTCGGGCACGACCTGGGGAGAGCACGAGATCGACT
ACGTCTACTTGATACAGGCGGACGTTGACCTTGACCCCAACCCCAACGAG
GTTTCCGACGCGGTTTTCTTAGGCAAGGAAGGATTGCGCTCGCTCTTGGC
GGAAGCCGAGCGAGGAGAGGTGGAGTTCACGCCATGGTCGGCTTACATCA
TCGACAAGTTCGTTTTCGGTTGGTGGGACCACGTGGGTGACAAGGAGAAG
CTTGCGTCCTTCCGGGACAATGTCATTCACCGAGTCGGCTCGTGTGCGGA
CGAGGAAGAATAG
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