prot_P-littoralis_Contig131.10.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig131.10.2
Unique Name	prot_P-littoralis_Contig131.10.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	294

Homology

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BLAST of mRNA_P-littoralis_Contig131.10.2 vs. uniprot
Match: A0A6H5L313_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L313_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 3.430e-9
Identity = 34/73 (46.58%), Postives = 45/73 (61.64%), Query Frame = 0

Query:   24 WTFAANSKGEVLWYCPSGGSEDERCGNRPHLQDYWKKHYGSTAKFPADQFTFKAEGAPSSFKRVD---PDKGT 93
            WT+ +  K  VLWYCP GG E +RC NR  LQ Y ++ YG+  + P  QFTF  + AP  ++RVD   PD G+
Sbjct: 1011 WTYGSFDKERVLWYCPPGGREADRCTNREQLQAYLRERYGN-GRVPG-QFTFSGKDAPPHWERVDAHCPDNGS 1081

[Close]

BLAST of mRNA_P-littoralis_Contig131.10.2 vs. uniprot
Match: D8LQA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA3_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 4.800e-8
Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 0

Query:   24 WTFAANSKGEVLWYCPSGGSEDERCGNRPHLQDYWKKHYGSTAKFPADQFTFKAEGAPSSFKRVD---PDKGT 93
            WT+ +  K  VLWYCP GG E +RC +   LQ Y ++ YG+  + P  QFTF  + AP  ++RVD   PD G+
Sbjct: 1037 WTYGSFGKERVLWYCPPGGGEADRCTSSEQLQAYLRERYGN-GRVPG-QFTFSGKDAPPQWERVDARRPDNGS 1107

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig131.10.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig131.10.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L313_9PHAE	3.430e-9	46.58	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LQA3_ECTSI	4.800e-8	43.84	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..160

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig131	contig	P-littoralis_Contig131:89093..93418 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig131.10.2	mRNA_P-littoralis_Contig131.10.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig131 88950..93418 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig131.10.2 ID=prot_P-littoralis_Contig131.10.2|Name=mRNA_P-littoralis_Contig131.10.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=294bp
MSSRSSGRRQGRHSPRCSPSLTTWTFAANSKGEVLWYCPSGGSEDERCGN
RPHLQDYWKKHYGSTAKFPADQFTFKAEGAPSSFKRVDPDKGTEYEEDEG
QESDGSGGVGGGDGGGSSSGGSGGGGGGREGGESTSSSHFTAGQGQNKST
GSSSPPNSKERRGETSQDAGTGAAASDTAASPLGGAEAGESSDDDASCSA
EMPPRCVPGREDDGEGGGLALSNASSPEDQEDGRSIGSSSTAEEAEEAGD
DSDGPEKFSTTQLDDGGGAEEAEPAQLESAGPEPEPVISPGDIG