mRNA_P-littoralis_Contig1301.10.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1301.10.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE) HSP 1 Score: 297 bits (761), Expect = 9.840e-96 Identity = 147/220 (66.82%), Postives = 168/220 (76.36%), Query Frame = 1
Query: 4 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSPLYFSLVYLLRRPENH---LLLFTFAS-------------DSVRKDIECFFGRLKGRF 615
+VLGVLQVLGRGNCFADVANFSLMS++TAE+SFHRFC CFA GLW W+RLPEG+ L++VES Y LG+PGAVGS DCTHV WERCA+SET HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV+RDLSV R++ EEPW SYKYE+Y D T + +L+ H LL+ F +SVRKDIEC FGRLKGRF
Sbjct: 210 KVLGVLQVLGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMY--DETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRF 427
BLAST of mRNA_P-littoralis_Contig1301.10.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 276 bits (707), Expect = 5.650e-89 Identity = 134/218 (61.47%), Postives = 162/218 (74.31%), Query Frame = 1
Query: 4 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSPLYFSLVYL----LRRPENHLLLFTFASD----------SVRKDIECFFGRLKGRF 615
+VLGVLQVLGRGNCFADVA SLMS+ TAEKSFHRFCDCF+ GLWHQWV LPEG+ LK+V Y +G PGAV S DCTH++W C +SETN HKGKEGYT++V+EA CDH+GRI++STKG+PGAENDKTVVKRDLSV R++ EEPWASYK+ L+ L+G ++ + + R P +AS+ S+RKDIEC FGRLKGRF
Sbjct: 112 KVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRF 329
BLAST of mRNA_P-littoralis_Contig1301.10.1 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE) HSP 1 Score: 262 bits (669), Expect = 1.120e-85 Identity = 136/220 (61.82%), Postives = 154/220 (70.00%), Query Frame = 1
Query: 4 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSPLYFSLVYLLRRPENH---LLLFTFAS-------------DSVRKDIECFFGRLKGRF 615
QVLGVLQ LGRGNCFADVANFSLMS++TAE+SFHRFC CFA GLW W+RLPEG+DL++VES Y LG+PGAVGS DCTHV WERCA+SET HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV YKYE+Y D T + +L+ H LL+ F +SVRKD+EC FGRLKGRF
Sbjct: 5 QVLGVLQALGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVV----------------IYKYEMY--DETGDVTKHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDMECLFGRLKGRF 206
BLAST of mRNA_P-littoralis_Contig1301.10.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE) HSP 1 Score: 258 bits (658), Expect = 2.260e-83 Identity = 126/197 (63.96%), Postives = 146/197 (74.11%), Query Frame = 1
Query: 73 MSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSPLYFSLVYLLRRPENH---LLLFTFAS-------------DSVRKDIECFFGRLKGRF 615
MS++TAE+SFHRFC CFA GLW W+RLPEG+DL++VES Y LG+PGAVGS DCTHV WERCA+SET HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV+RDLSV R++ EEPW SYKYE+Y D T + +L+ H LL+ F +SVRKDIEC FGRLKGRF
Sbjct: 1 MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMY--DETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRF 195
BLAST of mRNA_P-littoralis_Contig1301.10.1 vs. uniprot
Match: A0A6H5K8G0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8G0_9PHAE) HSP 1 Score: 249 bits (637), Expect = 4.590e-80 Identity = 111/161 (68.94%), Postives = 133/161 (82.61%), Query Frame = 1
Query: 7 VLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSS 489
VLGVLQVLGRGNCFADVA SLMS+ TAEKSFHRFCDCF+ GLWHQWV LPEG+ LK+V Y + PG V S DCTH++ C +SETN HKGKEGYT++V+EA CDH+GRI++STKG+PGAENDKTVVKRDLSV R++ EEPWA YK+ L+ L+G ++
Sbjct: 101 VLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMVCPGVVASVDCTHISLPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWARYKFVLFDLEGNTT 261
BLAST of mRNA_P-littoralis_Contig1301.10.1 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE) HSP 1 Score: 201 bits (511), Expect = 1.310e-61 Identity = 95/195 (48.72%), Postives = 131/195 (67.18%), Query Frame = 1
Query: 73 MSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSPL----------YFSLVYLLRRPENHLLL----FTFASDSVRKDIECFFGRLKGRF 615
MS +TAEKSFH FC+ F+ LW WV+LP GD+LK+VE ++ + G+PGA+ S DCTH W SE ++ GKEGY +VV EA CDH GRIIA+TK YPG+ENDKT+++RD S+ RI+ EEPW+S KY+LY DG+ + Y + L+ ++H + ++ +S+RKDIEC +GR+KGRF
Sbjct: 1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAISSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKIPLLIPPIKHHATVEEHDWSRRLESMRKDIECCYGRVKGRF 195
BLAST of mRNA_P-littoralis_Contig1301.10.1 vs. uniprot
Match: A0A6H5JJM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM8_9PHAE) HSP 1 Score: 185 bits (470), Expect = 1.430e-56 Identity = 79/139 (56.83%), Postives = 104/139 (74.82%), Query Frame = 1
Query: 73 MSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSS 489
MS +TAEKSFH FC+ F+ LW WV+LP GD+LK+VE ++ + G+PGA+GS DCTH W SE ++ GKEGY +VV EA CDH GRIIA+TK YPG+ENDKT+++RD S+ RI+ EEPW + KY+LY DG+ +
Sbjct: 1 MSVATAEKSFHHFCEKFSAALWDTWVKLPIGDELKEVERVFRKSGYPGAIGSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWNTLKYKLYNADGSET 139
BLAST of mRNA_P-littoralis_Contig1301.10.1 vs. uniprot
Match: A0A6H5KW69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW69_9PHAE) HSP 1 Score: 186 bits (471), Expect = 2.700e-56 Identity = 79/139 (56.83%), Postives = 104/139 (74.82%), Query Frame = 1
Query: 73 MSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSS 489
MS +TAEKSFH FC+ F+ LW WV+LP GD+LK+VE ++ + G+PGA+GS DCTH W SE ++ GKEGY +VV EA CDH GRIIA+TK YPG+ NDKT+++RD S+ RI+ EEPW+S KY+LY DG+ +
Sbjct: 1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAIGSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSANDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSET 139
BLAST of mRNA_P-littoralis_Contig1301.10.1 vs. uniprot
Match: A0A6H5K1K5_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K5_9PHAE) HSP 1 Score: 184 bits (468), Expect = 3.480e-56 Identity = 78/139 (56.12%), Postives = 104/139 (74.82%), Query Frame = 1
Query: 73 MSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSS 489
MS +TAEKSFH FC+ F+ LW WV+LP GD+LK+VE ++ + G+PGA+GS DCTH W SE ++ GKEGY +VV EA CDH G IIA+TK YPG+ENDK++++RD S+ RI+ EEPW+S KY+LY DG+ +
Sbjct: 1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAIGSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGHIIAATKSYPGSENDKSIIQRDKSIWRIRDEEPWSSLKYKLYNADGSET 139
BLAST of mRNA_P-littoralis_Contig1301.10.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 186 bits (473), Expect = 4.520e-54 Identity = 94/220 (42.73%), Postives = 132/220 (60.00%), Query Frame = 1
Query: 4 QVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSPLYFSLVYLLRRPENHL----------------LLFTFASDSVRKDIECFFGRLKGRF 615
QVL LQ+L RGN FAD+ + S +S T +FHRFC FA L+ ++V LP G+DL++V Y+++GFPGAVGS D TH+ W C Y++ I+ GKEG +V F+ DH+GR++A T+G+ GA NDKT+++ D +V RI+ + + KY+LY DG YLL H L+F+ +S RKD+EC+FG LKGRF
Sbjct: 83 QVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEE--KGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRF 300 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1301.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1301.10.1 >prot_P-littoralis_Contig1301.10.1 ID=prot_P-littoralis_Contig1301.10.1|Name=mRNA_P-littoralis_Contig1301.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=205bp KQVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVback to top mRNA from alignment at P-littoralis_Contig1301:34447..35926+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1301.10.1 ID=mRNA_P-littoralis_Contig1301.10.1|Name=mRNA_P-littoralis_Contig1301.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1480bp|location=Sequence derived from alignment at P-littoralis_Contig1301:34447..35926+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1301:34447..35926+ >mRNA_P-littoralis_Contig1301.10.1 ID=mRNA_P-littoralis_Contig1301.10.1|Name=mRNA_P-littoralis_Contig1301.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=615bp|location=Sequence derived from alignment at P-littoralis_Contig1301:34447..35926+ (Pylaiella littoralis U1_48)back to top |