prot_P-littoralis_Contig1300.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1300.2.1
Unique Nameprot_P-littoralis_Contig1300.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length125
Homology
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Match: A0A6H5L4M4_9PHAE (Resolvase/invertase-type recombinase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M4_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 3.890e-65
Identity = 110/124 (88.71%), Postives = 119/124 (95.97%), Query Frame = 0
Query:    1 MAYVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQALRSEESRLCARKIAKERRNASRIDIGYARVSSAKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL 124
            MA+VNTKTAIERLGVSNV LRKW K EAIPTI TPGGQR+YDIETFQKTQALRSEE+RLCAR++AK+++NASRIDIGYARVS +KQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL
Sbjct:    1 MAFVNTKTAIERLGVSNVTLRKWDKLEAIPTIRTPGGQRVYDIETFQKTQALRSEEARLCARRMAKDKKNASRIDIGYARVSFSKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL 124          
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Match: UPI001906EF99 (IS607 family transposase n=1 Tax=Chromatium weissei TaxID=626372 RepID=UPI001906EF99)

HSP 1 Score: 97.4 bits (241), Expect = 7.040e-23
Identity = 52/122 (42.62%), Postives = 66/122 (54.10%), Query Frame = 0
Query:    3 YVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQALRSEESRLCARKIAKERRNASRIDIGYARVSSAKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL 124
            Y+ ++ A +RLG     LRKW     IP I T  GQR YD++ + +TQ                      RI I Y RVSS KQ++DL RQ QF+R+  P   I+ DIGSGLNFKRKG K +
Sbjct:    2 YIPSREAAKRLGCHPCTLRKWADAGKIPHIRTDSGQRRYDVDAYLRTQP--------------------QRIVISYCRVSSFKQRDDLERQVQFMREKYPQAEIIKDIGSGLNFKRKGLKAI 103          
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Match: A0A839HLC5_9GAMM (IS607 family transposase n=2 Tax=Thiospirillum jenense TaxID=1653858 RepID=A0A839HLC5_9GAMM)

HSP 1 Score: 96.3 bits (238), Expect = 2.080e-22
Identity = 52/122 (42.62%), Postives = 64/122 (52.46%), Query Frame = 0
Query:    3 YVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQALRSEESRLCARKIAKERRNASRIDIGYARVSSAKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL 124
            YV T+ A +RLG     LR+W     IP I T  GQR YD++ + + Q                      RI I Y RVSS KQ+ DL RQ QF+R+  P   I+ DIGSGLNFKRKG K +
Sbjct:    4 YVTTREAAKRLGCHPETLRRWANAGKIPHIRTSSGQRRYDVDAYLRIQT--------------------QRIVISYCRVSSFKQRHDLDRQVQFMRNQYPQAEIIKDIGSGLNFKRKGLKTI 105          
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Match: A0A1W9L0A6_9GAMM (DNA invertase n=1 Tax=Beggiatoa sp. IS2 TaxID=1934247 RepID=A0A1W9L0A6_9GAMM)

HSP 1 Score: 95.1 bits (235), Expect = 5.310e-22
Identity = 51/124 (41.13%), Postives = 67/124 (54.03%), Query Frame = 0
Query:    1 MAYVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQALRSEESRLCARKIAKERRNASRIDIGYARVSSAKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL 124
            MAYVNT+TA  RLGV +  LR W +   I T+ TPGG RLYD+++ +                       + R    YARVSS  QK+DL  Q ++++   P   ++ DIGSGLNFKRKG   L
Sbjct:    1 MAYVNTRTACNRLGVHSNTLRNWDRDGKIKTMRTPGGIRLYDLDSLE-----------------------SDRRKFIYARVSSRNQKDDLNSQIEYLKTRFPNHELIEDIGSGLNFKRKGLNTL 101          
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Match: A0A839HD67_9GAMM (IS607 family transposase n=1 Tax=Thiospirillum jenense TaxID=1653858 RepID=A0A839HD67_9GAMM)

HSP 1 Score: 91.7 bits (226), Expect = 7.340e-21
Identity = 53/122 (43.44%), Postives = 65/122 (53.28%), Query Frame = 0
Query:    3 YVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQALRSEESRLCARKIAKERRNASRIDIGYARVSSAKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL 124
            YV T+ A +RLG     LR+W     IP I T  GQR YD++ +     LR E                 RI I Y RVSS KQ++DL RQ QF+R+  P   I+ DIGSGLNFKR G K +
Sbjct:    4 YVTTREAAKRLGCHPETLRRWADAGKIPHIRTSSGQRRYDVDAYL---GLRKE-----------------RIVIIYCRVSSFKQRDDLDRQVQFLRNQYPQAEIIKDIGSGLNFKRTGLKTI 105          
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Match: UPI001A92502B (IS607 family transposase n=1 Tax=Chromatium okenii TaxID=61644 RepID=UPI001A92502B)

HSP 1 Score: 91.7 bits (226), Expect = 1.880e-20
Identity = 47/122 (38.52%), Postives = 64/122 (52.46%), Query Frame = 0
Query:    3 YVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQALRSEESRLCARKIAKERRNASRIDIGYARVSSAKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL 124
            Y+ ++ A +RLG     LRKW     IP I T  GQR YD++ + + Q                      R+ I Y RVSS KQ++DL RQ QF+R+  P   ++ DIG+GLNFKRKG   +
Sbjct:   21 YIPSREAAKRLGCHPCTLRKWADAGKIPHIRTSSGQRRYDVDAYLRIQP--------------------QRVIISYCRVSSFKQRDDLDRQVQFMREKYPQAELIKDIGTGLNFKRKGLNSI 122          
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Match: A0A3B8JQ45_9CYAN (IS607 family transposase n=1 Tax=Cyanobacteria bacterium UBA8553 TaxID=2055771 RepID=A0A3B8JQ45_9CYAN)

HSP 1 Score: 90.9 bits (224), Expect = 2.290e-20
Identity = 53/125 (42.40%), Postives = 68/125 (54.40%), Query Frame = 0
Query:    1 MAYVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQALRSEESRLCARKIAKERRNASRIDIG-YARVSSAKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL 124
            MAY+  + A+E LG+    LRK+     I  I    GQRLYD+E++                     RR A+R  I  Y RVSSAKQ++DL RQ +F+R   P   I+ DIGSGLNFKRKG + L
Sbjct:    1 MAYIPLRKAVEFLGLHPHTLRKYADEGKISHIKNEAGQRLYDVESY---------------------RRGATRCQIVCYCRVSSAKQRDDLARQVEFMRQQYPDAEIIKDIGSGLNFKRKGLQAL 104          
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Match: A0A6P0SSH2_9CYAN (IS607 family transposase n=5 Tax=unclassified Moorena TaxID=2683338 RepID=A0A6P0SSH2_9CYAN)

HSP 1 Score: 90.5 bits (223), Expect = 4.410e-20
Identity = 54/122 (44.26%), Postives = 67/122 (54.92%), Query Frame = 0
Query:    3 YVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQALRSEESRLCARKIAKERRNASRIDIGYARVSSAKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL 124
            YV  + A  RLGVS   L +W +   I  I TPGGQR YD+ +     ++RSE+ R              R  I YARVSS  QK DL +Q QF++   P   I+ DIGSGLNFKRKG + L
Sbjct:    7 YVPPRVASNRLGVSTKTLERWLESGKIQGIKTPGGQRRYDLNSVV---SIRSEKIR------------TDRSTILYARVSSRSQKNDLEQQVQFLQSRYPDAEIIKDIGSGLNFKRKGLQAL 113          
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Match: A0A1Z4IYJ5_9CYAN (ISSoc2, resolvase n=1 Tax=Scytonema sp. HK-05 TaxID=1137095 RepID=A0A1Z4IYJ5_9CYAN)

HSP 1 Score: 90.5 bits (223), Expect = 5.020e-20
Identity = 49/118 (41.53%), Postives = 66/118 (55.93%), Query Frame = 0
Query:    3 YVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQALRSEESRLCARKIAKERRNASRIDIGYARVSSAKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKG 120
            YV  + A +RLGV    +R+W     +P+I T G QRL+DI+++ K                  E+    R  I Y RVSS KQ++DL RQ +F+R   P   I++DIGSGLNFKRKG
Sbjct:    4 YVPLRVACDRLGVHANTIRRWADTGQLPSIRTQGNQRLFDIDSYLK------------------EKEGEKRRKICYCRVSSHKQRDDLERQVEFMRRRYPNHEIITDIGSGLNFKRKG 103          
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Match: A0A1C0VE84_9CYAN (DNA invertase n=9 Tax=Limnothrix TaxID=132605 RepID=A0A1C0VE84_9CYAN)

HSP 1 Score: 89.0 bits (219), Expect = 1.280e-19
Identity = 51/124 (41.13%), Postives = 69/124 (55.65%), Query Frame = 0
Query:    1 MAYVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQALRSEESRLCARKIAKERRNASRIDIGYARVSSAKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL 124
            MAY+  + A+E LG+    LRK+     I TI    GQRLY++E++ + +A RS                     + Y RVSS KQ++DL RQ QF+RD  P   I+ DIGSGLNF+RKG + L
Sbjct:    1 MAYIPLRKAVEFLGLHPNTLRKYADEGKIETIRNEAGQRLYNVESYGR-KATRS-------------------TVVCYCRVSSPKQRDDLARQVQFMRDRYPEAEIIQDIGSGLNFQRKGLQSL 104          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4M4_9PHAE3.890e-6588.71Resolvase/invertase-type recombinase catalytic dom... [more]
UPI001906EF997.040e-2342.62IS607 family transposase n=1 Tax=Chromatium weisse... [more]
A0A839HLC5_9GAMM2.080e-2242.62IS607 family transposase n=2 Tax=Thiospirillum jen... [more]
A0A1W9L0A6_9GAMM5.310e-2241.13DNA invertase n=1 Tax=Beggiatoa sp. IS2 TaxID=1934... [more]
A0A839HD67_9GAMM7.340e-2143.44IS607 family transposase n=1 Tax=Thiospirillum jen... [more]
UPI001A92502B1.880e-2038.52IS607 family transposase n=1 Tax=Chromatium okenii... [more]
A0A3B8JQ45_9CYAN2.290e-2042.40IS607 family transposase n=1 Tax=Cyanobacteria bac... [more]
A0A6P0SSH2_9CYAN4.410e-2044.26IS607 family transposase n=5 Tax=unclassified Moor... [more]
A0A1Z4IYJ5_9CYAN5.020e-2041.53ISSoc2, resolvase n=1 Tax=Scytonema sp. HK-05 TaxI... [more]
A0A1C0VE84_9CYAN1.280e-1941.13DNA invertase n=9 Tax=Limnothrix TaxID=132605 RepI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.1660.10coord: 3..61
e-value: 1.8E-5
score: 26.5
IPR006119Resolvase, N-terminal catalytic domainPFAMPF00239Resolvasecoord: 76..124
e-value: 7.9E-7
score: 29.2
IPR006119Resolvase, N-terminal catalytic domainPROSITEPS51736RECOMBINASES_3coord: 74..124
score: 12.701468
IPR036162Resolvase-like, N-terminal catalytic domain superfamilyGENE3D3.40.50.1390coord: 74..124
e-value: 2.4E-9
score: 39.2
IPR036162Resolvase-like, N-terminal catalytic domain superfamilySUPERFAMILY53041Resolvase-likecoord: 76..124
IPR006118Recombinase, conserved sitePROSITEPS00397RECOMBINASES_1coord: 78..86
IPR009061Putative DNA-binding domain superfamilySUPERFAMILY46955Putative DNA-binding domaincoord: 3..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1300contigP-littoralis_Contig1300:4127..4501 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1300.2.1mRNA_P-littoralis_Contig1300.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1300 3917..4501 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1300.2.1 ID=prot_P-littoralis_Contig1300.2.1|Name=mRNA_P-littoralis_Contig1300.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=125bp
MAYVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQ
ALRSEESRLCARKIAKERRNASRIDIGYARVSSAKQKEDLGRQEQFIRDS
CPGISILSDIGSGLNFKRKGFKKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006119Resolv_N
IPR036162Resolvase-like_N_sf
IPR006118Recombinase_CS
IPR009061DNA-bd_dom_put_sf