mRNA_P-littoralis_Contig1300.2.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Match: A0A6H5L4M4_9PHAE (Resolvase/invertase-type recombinase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M4_9PHAE) HSP 1 Score: 353 bits (907), Expect = 5.380e-111 Identity = 177/195 (90.77%), Postives = 187/195 (95.90%), Query Frame = 1
Query: 1 MAYVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQALRSEESRLCARKIAKERRNASRIDIGYARVSSAKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL*RCIMQEQIDRVLVAYKDRLCRFAFEIIQFVCDENNTELVVLNQNENGSAETELMEDLMAVVHVFSSRLYG 585
MA+VNTKTAIERLGVSNV LRKW K EAIPTI TPGGQR+YDIETFQKTQALRSEE+RLCAR++AK+++NASRIDIGYARVS +KQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL RCIMQ QIDRVLVAYKDRLCRFAFEIIQF+CDENNTELVVLNQNENGSAE ELMEDLMAVVHVFSSRLYG
Sbjct: 1 MAFVNTKTAIERLGVSNVTLRKWDKLEAIPTIRTPGGQRVYDIETFQKTQALRSEEARLCARRMAKDKKNASRIDIGYARVSFSKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKLLRCIMQGQIDRVLVAYKDRLCRFAFEIIQFICDENNTELVVLNQNENGSAEAELMEDLMAVVHVFSSRLYG 195
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Match: A0A1W9L0A6_9GAMM (DNA invertase n=1 Tax=Beggiatoa sp. IS2 TaxID=1934247 RepID=A0A1W9L0A6_9GAMM) HSP 1 Score: 156 bits (395), Expect = 5.100e-45 Identity = 79/195 (40.51%), Postives = 119/195 (61.03%), Query Frame = 1
Query: 1 MAYVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQALRSEESRLCARKIAKERRNASRIDIGYARVSSAKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL*RCIMQEQIDRVLVAYKDRLCRFAFEIIQFVCDENNTELVVLNQNENGSAETELMEDLMAVVHVFSSRLYG 585
MAYVNT+TA RLGV + LR W + I T+ TPGG RLYD+++ + + R YARVSS QK+DL Q ++++ P ++ DIGSGLNFKRKG L +M Q+ ++V +KDRLCRF +E+I+ + +N+ +++VL++++ S + EL+ DL++++HVFS RLYG
Sbjct: 1 MAYVNTRTACNRLGVHSNTLRNWDRDGKIKTMRTPGGIRLYDLDSLE-----------------------SDRRKFIYARVSSRNQKDDLNSQIEYLKTRFPNHELIEDIGSGLNFKRKGLNTLLELVMSGQVSEIIVTHKDRLCRFGYELIEAIATKNSCKIMVLDESKL-SPQAELVNDLLSIIHVFSCRLYG 171
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Match: A0A1U7N6P8_9CYAN (DNA invertase n=11 Tax=Moorena TaxID=1155738 RepID=A0A1U7N6P8_9CYAN) HSP 1 Score: 151 bits (382), Expect = 4.550e-43 Identity = 82/195 (42.05%), Postives = 119/195 (61.03%), Query Frame = 1
Query: 1 MAYVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQALRSEESRLCARKIAKERRNASRIDIGYARVSSAKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL*RCIMQEQIDRVLVAYKDRLCRFAFEIIQFVCDENNTELVVLNQNENGSAETELMEDLMAVVHVFSSRLYG 585
M YV + A E LGVS LR W + I TI TP QR YD+++ + E +N + I YARVS+ +QKEDL RQ F++ P ++ DIGSGLN++RKG K L ++ + ++VA+KDR+ RF FE+I+++C++N +VVL+Q+ N S E E++ED++A+VHVFS RLYG
Sbjct: 1 MRYVPPRKAREILGVSERTLRYWEQEGKIKTIRTPSNQRRYDVDS------------------VLGEVKN--KPTIIYARVSTRRQKEDLERQAAFLQGKFPNAEVIKDIGSGLNYRRKGLKALLGRVLSRDVSEIVVAHKDRMARFGFELIEWICEQNGCRIVVLDQS-NLSPEREMVEDILAIVHVFSCRLYG 174
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Match: A0A6P0SSH2_9CYAN (IS607 family transposase n=5 Tax=unclassified Moorena TaxID=2683338 RepID=A0A6P0SSH2_9CYAN) HSP 1 Score: 150 bits (380), Expect = 1.380e-42 Identity = 86/193 (44.56%), Postives = 118/193 (61.14%), Query Frame = 1
Query: 7 YVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQALRSEESRLCARKIAKERRNASRIDIGYARVSSAKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL*RCIMQEQIDRVLVAYKDRLCRFAFEIIQFVCDENNTELVVLNQNENGSAETELMEDLMAVVHVFSSRLYG 585
YV + A RLGVS L +W + I I TPGGQR YD+ + ++RSE+ R R I YARVSS QK DL +Q QF++ P I+ DIGSGLNFKRKG + L ++ V+VA+KDRLCRF F++I ++C + T+++VL++ N S E E++ED++AV+HVFS RLYG
Sbjct: 7 YVPPRVASNRLGVSTKTLERWLESGKIQGIKTPGGQRRYDLNSVV---SIRSEKIR------------TDRSTILYARVSSRSQKNDLEQQVQFLQSRYPDAEIIKDIGSGLNFKRKGLQALLDRVIGGSCKYVVVAHKDRLCRFGFDLISWLCSKFQTKILVLDEK-NLSPEQEMVEDVLAVIHVFSCRLYG 183
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Match: A0A846H8F0_9CYAN (IS607 family transposase n=1 Tax=Hassallia byssoidea VB512170 TaxID=1304833 RepID=A0A846H8F0_9CYAN) HSP 1 Score: 150 bits (380), Expect = 1.380e-42 Identity = 83/193 (43.01%), Postives = 111/193 (57.51%), Query Frame = 1
Query: 7 YVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQALRSEESRLCARKIAKERRNASRIDIGYARVSSAKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL*RCIMQEQIDRVLVAYKDRLCRFAFEIIQFVCDENNTELVVLNQNENGSAETELMEDLMAVVHVFSSRLYG 585
YV+ A LGV+ LR+W K E I I T GGQR YDI F R + YARVSS KQ+EDL RQ ++ P I+++IG GLN+KRK F L +MQ I+R+++AYKDRL RF F+ ++C N+ E+VVLNQ E S E E++ED++A++H FS+RLYG
Sbjct: 5 YVSPADAARTLGVNERTLRRWEKEEKITAIRTVGGQRRYDITAFTTKPV---------------------RCTVIYARVSSPKQREDLQRQCDYLESKYPNSEIIAEIGGGLNYKRKKFLALLERVMQGDIERIVIAYKDRLARFGFDFFAWLCSLNSCEIVVLNQVEL-SPEREMVEDILAILHCFSARLYG 175
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Match: A0A6M0GB08_9CYAN (IS607 family transposase n=1 Tax=Symploca sp. SIO2E6 TaxID=2607809 RepID=A0A6M0GB08_9CYAN) HSP 1 Score: 150 bits (379), Expect = 1.680e-42 Identity = 78/193 (40.41%), Postives = 121/193 (62.69%), Query Frame = 1
Query: 7 YVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQALRSEESRLCARKIAKERRNASRIDIGYARVSSAKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL*RCIMQEQIDRVLVAYKDRLCRFAFEIIQFVCDENNTELVVLNQNENGSAETELMEDLMAVVHVFSSRLYG 585
++ + A LGV L +W + I I TP GQR YD+E++QK E ++SR+ I YARVSS KQK DL RQ + + P ++DIGSGLN+KR+G +L + +++ ++ +++A+KDRL RF FE+I+++C ENN ++++LNQ E S E E++ED++++VH+FS RLYG
Sbjct: 5 FLPPREAAAALGVHRRTLTRWEQQGKIVAIRTPSGQRRYDVESYQKKNLNYGEAHT-----------DSSRLTITYARVSSRKQKVDLDRQVAVLTNLYPHGKSITDIGSGLNYKRQGLIQLLKFVLEGKVKLIIIAHKDRLVRFGFELIEWLCTENNCKIIILNQ-ETLSPEKEMIEDILSIVHIFSCRLYG 185
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Match: A0A839HLC5_9GAMM (IS607 family transposase n=2 Tax=Thiospirillum jenense TaxID=1653858 RepID=A0A839HLC5_9GAMM) HSP 1 Score: 148 bits (374), Expect = 8.500e-42 Identity = 83/193 (43.01%), Postives = 112/193 (58.03%), Query Frame = 1
Query: 7 YVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQALRSEESRLCARKIAKERRNASRIDIGYARVSSAKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL*RCIMQEQIDRVLVAYKDRLCRFAFEIIQFVCDENNTELVVLNQNENGSAETELMEDLMAVVHVFSSRLYG 585
YV T+ A +RLG LR+W IP I T GQR YD++ + + Q RI I Y RVSS KQ+ DL RQ QF+R+ P I+ DIGSGLNFKRKG K + M+ +++VA++DRL RF +E+IQ V + N ELVVL+Q + S E EL +DL+ ++HVFS R++G
Sbjct: 4 YVTTREAAKRLGCHPETLRRWANAGKIPHIRTSSGQRRYDVDAYLRIQT--------------------QRIVISYCRVSSFKQRHDLDRQVQFMRNQYPQAEIIKDIGSGLNFKRKGLKTILERAMRGDCIQLVVAHRDRLARFGYELIQQVIEHNGGELVVLDQTSH-SPEHELTKDLLNILHVFSYRMHG 175
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Match: UPI0005A2CEF3 (IS607 family transposase n=1 Tax=Allocoleopsis franciscana TaxID=2886352 RepID=UPI0005A2CEF3) HSP 1 Score: 148 bits (374), Expect = 9.830e-42 Identity = 80/193 (41.45%), Postives = 112/193 (58.03%), Query Frame = 1
Query: 7 YVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQALRSEESRLCARKIAKERRNASRIDIGYARVSSAKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL*RCIMQEQIDRVLVAYKDRLCRFAFEIIQFVCDENNTELVVLNQNENGSAETELMEDLMAVVHVFSSRLYG 585
+V + A RLGVS L +W + I TPGGQR YD+++ + RI I YARVSS QK DL Q F++ P I+ DIGSGLN++RKGF L I+ + V+VA+KDRLCRF F+++ ++C+ EL+VLNQ+ + S E E++ED++A++HVFS RLYG
Sbjct: 7 HVPPRVAAARLGVSTKTLERWLEAGKIKAFITPGGQRRYDLDSIIPAG-------------------DTERISIIYARVSSRSQKNDLLTQIDFLQSHYPNAKIIQDIGSGLNYRRKGFLSLLERILSNDVGLVVVAHKDRLCRFGFDLVAWLCERQKCELLVLNQS-HLSPEREMVEDILAIIHVFSCRLYG 179
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Match: A0A6P0SVG0_9CYAN (IS607 family transposase n=2 Tax=unclassified Moorena TaxID=2683338 RepID=A0A6P0SVG0_9CYAN) HSP 1 Score: 148 bits (374), Expect = 1.140e-41 Identity = 80/193 (41.45%), Postives = 115/193 (59.59%), Query Frame = 1
Query: 7 YVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQALRSEESRLCARKIAKERRNASRIDIGYARVSSAKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL*RCIMQEQIDRVLVAYKDRLCRFAFEIIQFVCDENNTELVVLNQNENGSAETELMEDLMAVVHVFSSRLYG 585
YV + A RLGVS L +W + I I TPGGQR YD+++ +++ R I YARVSS QK DL +Q QF++ P I+ D+GSGLNFKRKG + L ++ ++VA+KDRLCRF F++I ++C + T+++VL++ N S E E++ED++AV+HVFS RLYG
Sbjct: 7 YVPPRVASIRLGVSTRTLERWLEEGKIQGIKTPGGQRRYDLDSVVSIPTKKTD--------------RGDRATILYARVSSRSQKNDLEQQVQFLKSRYPKAEIIKDVGSGLNFKRKGLQSLLDRVLNGTCKYIVVAHKDRLCRFGFDLISWLCSKFQTKILVLDEK-NLSPEQEMVEDVLAVIHVFSCRLYG 184
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Match: A0A1U7MZ12_9CYAN (DNA invertase n=12 Tax=Moorena TaxID=1155738 RepID=A0A1U7MZ12_9CYAN) HSP 1 Score: 148 bits (373), Expect = 1.390e-41 Identity = 81/193 (41.97%), Postives = 119/193 (61.66%), Query Frame = 1
Query: 7 YVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQALRSEESRLCARKIAKERRNASRIDIGYARVSSAKQKEDLGRQEQFIRDSCPGISILSDIGSGLNFKRKGFKKL*RCIMQEQIDRVLVAYKDRLCRFAFEIIQFVCDENNTELVVLNQNENGSAETELMEDLMAVVHVFSSRLYG 585
YV + A +RLGVS L +W + I I TPGGQR YD+++ AK +R+ I YARVSS QK DL +Q +F++ PG ++ DIGSGLNFKRKG + L ++ + ++VA+KDRLCRF F++I ++C + T+++VL++ + S E E++ED++A+VHVFS RLYG
Sbjct: 5 YVPPRVAAQRLGVSTRTLERWLEAGKIKGIKTPGGQRRYDLDSVVSIPP-------------AKPKRDI----ILYARVSSRSQKSDLEQQVRFLKSRYPGCEVIFDIGSGLNFKRKGLQSLLDRVLSNTCELIVVAHKDRLCRFGFDLISWLCGKFETKILVLDET-HLSPEQEMVEDILAIVHVFSCRLYG 179 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1300.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1300.2.1 >prot_P-littoralis_Contig1300.2.1 ID=prot_P-littoralis_Contig1300.2.1|Name=mRNA_P-littoralis_Contig1300.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=125bp MAYVNTKTAIERLGVSNVNLRKWGKPEAIPTIGTPGGQRLYDIETFQKTQback to top mRNA from alignment at P-littoralis_Contig1300:3917..4501- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1300.2.1 ID=mRNA_P-littoralis_Contig1300.2.1|Name=mRNA_P-littoralis_Contig1300.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=585bp|location=Sequence derived from alignment at P-littoralis_Contig1300:3917..4501- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1300:3917..4501- >mRNA_P-littoralis_Contig1300.2.1 ID=mRNA_P-littoralis_Contig1300.2.1|Name=mRNA_P-littoralis_Contig1300.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=375bp|location=Sequence derived from alignment at P-littoralis_Contig1300:3917..4501- (Pylaiella littoralis U1_48)back to top |