mRNA_P-littoralis_Contig1300.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1300.1.1 vs. uniprot
Match: A0A6H5L4M4_9PHAE (Resolvase/invertase-type recombinase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M4_9PHAE) HSP 1 Score: 249 bits (636), Expect = 5.470e-74 Identity = 119/126 (94.44%), Postives = 121/126 (96.03%), Query Frame = 1
Query: 1 SKSKLTKGWRNVSKRIANLVNEMHNKVALYLVRNYDVIMVGRLSKGVMKTKSHRNQKLLHASLKHYQFRQRLLNKANDHGKKVAIVPEQLTTKLCDRCGFINWKMKAEEVFNCPKCKHSCDRDIHS 378
SKSKLTKGWR VSKRIANLVNEMHNKVALYLVRNYD+IMVGRLS GVMKTKSHRNQKLLHASLKHYQFRQRL+N NDHGKKVAIVPEQLTTKLCDRCGFINWKMKAEEVF CPKCKHSCDRDIHS
Sbjct: 448 SKSKLTKGWRKVSKRIANLVNEMHNKVALYLVRNYDIIMVGRLSNGVMKTKSHRNQKLLHASLKHYQFRQRLINNGNDHGKKVAIVPEQLTTKLCDRCGFINWKMKAEEVFTCPKCKHSCDRDIHS 573
BLAST of mRNA_P-littoralis_Contig1300.1.1 vs. uniprot
Match: A0A349JKJ7_9CYAN (Transposase n=3 Tax=unclassified Microcoleaceae TaxID=2053578 RepID=A0A349JKJ7_9CYAN) HSP 1 Score: 84.7 bits (208), Expect = 4.530e-17 Identity = 45/122 (36.89%), Postives = 67/122 (54.92%), Query Frame = 1
Query: 43 RIANLVNEMHNKVALYLVRNYDVIMVGRLSKGVMKTKSHRNQKLLHA----SLKHYQFRQRLLNKANDHGKKVAIVPEQLTTKLCDRCGFINWKMKAEEVFNCPKCKHSCDRDIHSGRFIWL 396
+I NLV+E+HNK A YLV Y +I + M K R A +L HY+F+Q L ++A +G V V E+ T+K C +CG ++ K+ + F CP+C H+ DRD++ I L
Sbjct: 114 KIKNLVSELHNKTANYLVSKYKLIFLPTFETQQMVNKGKRKLTTKTARAMVTLSHYRFKQTLKHQATKYGCVVVDVTEEYTSKTCSKCGHVHRKLSGSKTFKCPECGHTLDRDLNGAFNILL 235
BLAST of mRNA_P-littoralis_Contig1300.1.1 vs. uniprot
Match: A7RAM2_PBCVA (Uncharacterized protein C068R n=1 Tax=Paramecium bursaria Chlorella virus AR158 TaxID=380598 RepID=A7RAM2_PBCVA) HSP 1 Score: 85.5 bits (210), Expect = 1.300e-16 Identity = 51/140 (36.43%), Postives = 78/140 (55.71%), Query Frame = 1
Query: 4 KSKLTKGWR-NVSKRIANLVNEMHNKVALYLVRNYDVIMVG--RLSKGVMKTKSHRNQKL------LHASLKHYQFRQRLLNKANDHGKKVAIVPEQLTTKLCDRCGFINWKMKAEEVFNCPKCKHSCDRDIHSGRFIWL 396
K K T+G R + +R+ NLV+EMH K+A L +YD I++ K K K+ R +K+ + L HY+FR+RL++ AN G +V I E+ T+K C CG +N + + + F CP+C DRD + R I +
Sbjct: 404 KDKRTRGKRLRLERRVGNLVDEMHWKIARELATDYDTIIIPPFETQKMAKKWKNGRYRKINKTAVRMMLRLAHYRFRERLIHVANKLGTRVVICTEEYTSKTCGNCGVVNADLGSAKKFKCPRCHIHVDRDGNGARNILI 543
BLAST of mRNA_P-littoralis_Contig1300.1.1 vs. uniprot
Match: K9YGA5_HALP7 (Transposase, IS605 OrfB family n=3 Tax=Halothece sp. (strain PCC 7418) TaxID=65093 RepID=K9YGA5_HALP7) HSP 1 Score: 78.2 bits (191), Expect = 4.090e-14 Identity = 48/133 (36.09%), Postives = 70/133 (52.63%), Query Frame = 1
Query: 10 KLTKGWRNVSKRIANLVNEMHNKVALYLVRNYDVIMVGRL--SKGVMKTKSHRNQKLLHA--SLKHYQFRQRLLNKANDHGKKVAIVPEQLTTKLCDRCGFINWKMKAEEVFNCPKCKHSCDRDIHSGRFIWL 396
K+ K + RI NLV ++HNKVA +LV Y VI + S+ V+K K N K + +L H++F + LL+KA G V E T+K C CG I+ ++ + F CP C ++ RD + R I L
Sbjct: 272 KMRKAATQIRHRIQNLVKDLHNKVAKFLVSCYKVIFLPTFNTSEMVLKDKRKINSKTARSMMTLSHHKFAEHLLHKAKRKGVLVVRCNESYTSKTCPECGHIHDRLGGSKKFKCPSCGYTVHRDWNGARNIML 404
BLAST of mRNA_P-littoralis_Contig1300.1.1 vs. uniprot
Match: A0A845YEN4_9CYAN (Transposase n=2 Tax=Symploca sp. SIO2G7 TaxID=2607798 RepID=A0A845YEN4_9CYAN) HSP 1 Score: 76.3 bits (186), Expect = 1.570e-13 Identity = 44/132 (33.33%), Postives = 66/132 (50.00%), Query Frame = 1
Query: 13 LTKGWRNVSKRIANLVNEMHNKVALYLVRNYDVIMVGRLSKGVMKTKSHRN--QKLLHASL--KHYQFRQRLLNKANDHGKKVAIVPEQLTTKLCDRCGFINWKMKAEEVFNCPKCKHSCDRDIHSGRFIWL 396
+ K + ++I NLV ++HNK A +LV NY V+ + M KS R +K L H++F+Q LL A V + E T+K C CG I+ K+ + F CP+C +S RD + R I +
Sbjct: 213 MRKASHRIRRKIQNLVKDLHNKAARFLVDNYKVVFLPTFDTSEMVVKSKRKLAKKTARNMLTWSHFKFKQHLLQMAQRERVIVVLCNESYTSKTCPECGHIHSKLGGNKKFQCPQCGYSAHRDWNGARNIMI 344
BLAST of mRNA_P-littoralis_Contig1300.1.1 vs. uniprot
Match: UPI001E1D2CBE (uncharacterized protein LOC123543738 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2CBE) HSP 1 Score: 76.3 bits (186), Expect = 2.110e-13 Identity = 40/128 (31.25%), Postives = 67/128 (52.34%), Query Frame = 1
Query: 43 RIANLVNEMHNKVALYLVRNYDVIMVGRLSKGVMKTKSHRNQKLLHASL-----KHYQFRQRLLNKANDHGKKVAIVPEQLTTKLCDRCGFINWKMKAEEVFNCPKCKHSCDRDIHSGRFIWLGYHGL 411
++ V+++H K+ YLV+NY ++++G++S + K N + +HY+FRQRLL++ D + E+ T+K C CG N K+ +E F C C + RD++ R I Y GL
Sbjct: 346 KLKTYVDDVHLKLCSYLVKNYKLVVLGKISVSSIVRKDRPNHLAKKGNRDLLCWQHYRFRQRLLHRVRDTDCEAVAQDERYTSKTCGNCGVKNNKLGGKETFICESCNYKTHRDVNGARNILCKYLGL 473
BLAST of mRNA_P-littoralis_Contig1300.1.1 vs. uniprot
Match: UPI001E1DA77B (uncharacterized protein LOC123544810 isoform X1 n=5 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DA77B) HSP 1 Score: 76.3 bits (186), Expect = 2.150e-13 Identity = 41/128 (32.03%), Postives = 70/128 (54.69%), Query Frame = 1
Query: 43 RIANLVNEMHNKVALYLVRNYDVIMVGRLSKGVMKTKSHRNQ--KLLHASL---KHYQFRQRLLNKANDHGKKVAIVPEQLTTKLCDRCGFINWKMKAEEVFNCPKCKHSCDRDIHSGRFIWLGYHGL 411
++ V+++H K+ YLV+NY ++++G++S + K +N K + L +HY+FRQRLL++ + E+ T+K C CG N K+ +E F+C C + RD++ R I Y GL
Sbjct: 366 KLKTYVDDVHLKLCSYLVKNYKLVVLGKISVSSIVRKDRQNHLPKSANRDLLCWQHYRFRQRLLHRVRGTDCEAVAQDERYTSKTCGNCGVKNNKLGGKETFHCKSCNYITHRDVNGARNILCKYLGL 493
BLAST of mRNA_P-littoralis_Contig1300.1.1 vs. uniprot
Match: B5VXV0_LIMMA (Transposase, IS605 OrfB family n=2 Tax=Limnospira TaxID=2596745 RepID=B5VXV0_LIMMA) HSP 1 Score: 75.9 bits (185), Expect = 2.940e-13 Identity = 47/137 (34.31%), Postives = 71/137 (51.82%), Query Frame = 1
Query: 4 KSKLTKGWRNVSKRIANLVNEMHNKVALYLVRNYDVIMVGRLSKGVMKTKSHRNQKLLHASLK------HYQFRQRLLNKANDHGKKVAIVPEQLTTKLCDRCGFINWKMKAEEVFNCPKCKHSCDRDIHSGRFIWL 396
+ ++ K + +RI NLV+++H KVA +LV +Y +I + + M KS R KL S+K HY+F + L+ +A G V E T+K C CG I+ K+ +VF CP C ++ RD R I L
Sbjct: 349 RDQMRKASHRMRERIRNLVDDLHKKVAHFLVNHYKLIFLPTFNSSQMVLKSRR--KLNSKSVKNLLTWSHYRFAKHLMQQAERKGVLVVRCNESYTSKTCPHCGKIHEKLGGSKVFKCPNCGYTAPRDWVGARNIML 483
BLAST of mRNA_P-littoralis_Contig1300.1.1 vs. uniprot
Match: A0A1V0SEV1_9VIRU (Transposase n=1 Tax=Hokovirus HKV1 TaxID=1977638 RepID=A0A1V0SEV1_9VIRU) HSP 1 Score: 75.9 bits (185), Expect = 3.150e-13 Identity = 40/132 (30.30%), Postives = 75/132 (56.82%), Query Frame = 1
Query: 4 KSKLTKGWRNVSKRIANLVNEMHNKVALYLVRNYD-VIMVGRLSKGVMKTKSHRNQKLLHASLKHYQFRQRLLNKANDHGKKVAIVPEQLTTKLCDRCGFINWKMKAEEVFNCPKCKHSCDRDIHSGRFIWL 396
K KL + ++I N+V E+HNK++LYL +NY+ +I+ + +++ K ++ K + HY+F++ + K+ ++G ++ IV E+ T++ C CG ++ K + C CK DRDI+ R I +
Sbjct: 578 KKKLXXXXXXLEEKIKNMVKEVHNKISLYLCKNYENIILPSFETSKMLRGKLNKKVKTVLQRQSHYKFKEHIKAKSEEYGSQIYIVTEEYTSQSCGICGKLSKNYK-NRIKKCSFCKTKIDRDINGSRNILI 708
BLAST of mRNA_P-littoralis_Contig1300.1.1 vs. uniprot
Match: A0A1V0SKR3_9VIRU (Transposase n=1 Tax=Klosneuvirus KNV1 TaxID=1977640 RepID=A0A1V0SKR3_9VIRU) HSP 1 Score: 75.1 bits (183), Expect = 3.970e-13 Identity = 48/146 (32.88%), Postives = 74/146 (50.68%), Query Frame = 1
Query: 1 SKSKLTKGWRNVSKRIANLVNEMHNKVALYLVRNYDVIMVGRLSKGVM---------KTKSHRNQ-----KLLHASLKHYQFRQRLLNKANDHGKKVAIVPEQLTTKLCDRCGFINWKMKAEEVFNCPKCKHSCDRDIHSGRFIWL 396
+K KL R + I NLV E+HN+ A YLV+NY I++ M K K+ N+ K + L HY+FRQ L NK ++G ++ +V E+ T+ C +CG ++ K E +C C + +RD++ R I L
Sbjct: 204 NKKKLKVKIRLTYRHIKNLVKELHNQTANYLVKNYKKILIPEFKTQEMIKNINLTDNKQKARVNKLDKRVKFVLLMLSHYRFRQHLTNKCVEYGCQIDVVTEEHTSMCCTKCGSLSKKYNGREK-HCDNCGYKINRDVNGARNILL 348 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1300.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1300.1.1 >prot_P-littoralis_Contig1300.1.1 ID=prot_P-littoralis_Contig1300.1.1|Name=mRNA_P-littoralis_Contig1300.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=146bp SKSKLTKGWRNVSKRIANLVNEMHNKVALYLVRNYDVIMVGRLSKGVMKTback to top mRNA from alignment at P-littoralis_Contig1300:2403..2840- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1300.1.1 ID=mRNA_P-littoralis_Contig1300.1.1|Name=mRNA_P-littoralis_Contig1300.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=438bp|location=Sequence derived from alignment at P-littoralis_Contig1300:2403..2840- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1300:2403..2840- >mRNA_P-littoralis_Contig1300.1.1 ID=mRNA_P-littoralis_Contig1300.1.1|Name=mRNA_P-littoralis_Contig1300.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=438bp|location=Sequence derived from alignment at P-littoralis_Contig1300:2403..2840- (Pylaiella littoralis U1_48)back to top |