mRNA_P-littoralis_Contig130.124.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig130.124.3 vs. uniprot
Match: D7FSB2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSB2_ECTSI) HSP 1 Score: 710 bits (1832), Expect = 2.210e-246 Identity = 347/440 (78.86%), Postives = 376/440 (85.45%), Query Frame = 1
Query: 1 LQVFREESLQRQDPASEEEEDERTRFADLAGGTDIFLGSAVQDSATAEWIATVVEEAGVKTRFSAGCPPELARASALGAFRPFPPAPALVRMLPDFLRDLVGGASSGTKKDRVLWDTLTGFYERNSSEDLTFLSLVLADSYVTTVPRVTGIGKDSNPDTLDCMLDNCKQEVINCAKDPACRACISCLTACPPNDQARQKIIKKIIIIKSGGREREKKKSYLYHMYRVCAYRCITSYETESMEKFSLCVLQKHNCMCNSAEIPVLPDPAPQTKFRGQALTHETAQDLFMGWLGKEAFSWKVVCGQNPAYDFFPSQHQIFYRGRGKGQMWYDPVFKVVTIKGEEVWRRRHYRVKSAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGALLVSRDGDWPEEKEMERVEKAFDSCGIKLWELFPV 1320
++VFREESL++ +S ER RF DLA +D+F+GSA+QD ATAEWIA+V+E+A + TRFSAGCPPELAR S +G FRP PPAPALVR+LPDFLRDL+GG +SGTKKDRVLWDTL FYERNSSEDLTFLSLVL DSYVTTVPRVTGIGKDSNPDT+DCM++NCKQEVI+CAKD CRACISCLTACPPNDQ VCAYRCITSYET++ME FSLCVLQK+NCMCNSAEIP LPDP Q FRG+ LTHETAQDLFMGWLGKEA+SWKVVCGQNPAYDFFPSQHQIFYRGRG+GQMWYDPVFKVVTIKGEEVWRRRHYRVK AVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTG+LLVSRDGDWPE+KEMERVEKAFDSCGIKLWELFPV
Sbjct: 71 MKVFREESLRKDKDSS----GERARFNDLAARSDVFVGSAIQDPATAEWIASVIEKADITTRFSAGCPPELARTSLVGKFRPDPPAPALVRILPDFLRDLIGGPNSGTKKDRVLWDTLNNFYERNSSEDLTFLSLVLVDSYVTTVPRVTGIGKDSNPDTVDCMMENCKQEVIDCAKDADCRACISCLTACPPNDQ-------------------------------VCAYRCITSYETKTMEMFSLCVLQKNNCMCNSAEIPTLPDPPAQATFRGKPLTHETAQDLFMGWLGKEAYSWKVVCGQNPAYDFFPSQHQIFYRGRGEGQMWYDPVFKVVTIKGEEVWRRRHYRVKPAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGSLLVSRDGDWPEQKEMERVEKAFDSCGIKLWELFPV 475
BLAST of mRNA_P-littoralis_Contig130.124.3 vs. uniprot
Match: A0A835Z990_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z990_9STRA) HSP 1 Score: 415 bits (1066), Expect = 3.850e-132 Identity = 206/413 (49.88%), Postives = 264/413 (63.92%), Query Frame = 1
Query: 94 GTDIFLGSAVQDSATAEWIATVVEEAGVKTRFSAGCPPELARASALGAFRPFPPAPALVRMLPDFLRDLVGGASSGTKKDRVLWDTLTGFYERNSSEDLTFLSLVLADSYVTTVPRVTGIGKDSNPDTLDCMLDNCKQEVINCAKDPACRACISCLTACPPNDQARQKIIKKIIIIKSGGREREKKKSYLYHMYRVCAYRCITSYETESMEKFSLCVLQKHNCMCNSAEIPVLPDPAPQTKFRGQALTHETAQDLFMGWLGKE-----AFSWKVVCGQNPAYDFFPSQHQIFYRGRGKGQMWYDPVFKVVTIKGEEVWRRRHYRVKSAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGALLVSRDGDWPEEKEMERVEKAFDSCGIKLWELFP 1317
G D+F+ + V D + A IA V AGV TR PEL + LG +RP A + R L F L GG+ DR L+ + FYER S+EDL F++L L ++YVT VP G+GK S + C+L C+ +++ C ++P C+ACI+CL CPPNDQ VC+YRCITSYET + E+FSLC++ KHNCM N AE+P PDPAP T +RG+ L HET +D+ +GWLG E +SWKV CGQNPAYD+FP+QHQIFYRG+ +G MWYDPVF+V T+ GE+VWRRRHYRV+ PGTF FSVLDNGV S EYWRI+ ++DLSW YY+GAA AAGQ+Y GALL++ DG+WP ME V AF +CGI++WEL+P
Sbjct: 41 GADVFIATGVTDRSEAGAIAAAVRAAGVATRLVFDSAPELDTLTKLGNYRPAAFA-GVPRRLSIFRAALRGGSGD----DRALYTLVKTFYERCSAEDLAFMALSLVNAYVTEVPAAQGLGKKSGVGMVACILTKCRAQLLACVREPTCKACITCLNKCPPNDQ-------------------------------VCSYRCITSYETATFEQFSLCLMTKHNCMGNHAEMPASPDPAPMTHYRGRPLDHETGEDILIGWLGGEDQGLRPWSWKVACGQNPAYDYFPNQHQIFYRGKREGTMWYDPVFQVNTLAGEKVWRRRHYRVRRGTAPGTFFFSVLDNGVTSKEYWRIVAAAEDLSWACVYYSGAAAAAGQAYAGALLITPDGEWPAPAAMEEVTAAFATCGIEMWELYP 417
BLAST of mRNA_P-littoralis_Contig130.124.3 vs. uniprot
Match: A0A5B8MGQ5_9CHLO (VDE domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MGQ5_9CHLO) HSP 1 Score: 363 bits (931), Expect = 2.500e-113 Identity = 179/339 (52.80%), Postives = 227/339 (66.96%), Query Frame = 1
Query: 313 SSGTKKDRVLWDTLTGFYERNSSEDLTFLSLVLADSYVTTVPRVT--GIGKDSNPDTLDCMLDNCKQEVINCAKDPACRACISCLTACPPNDQARQKIIKKIIIIKSGGREREKKKSYLYHMYRVCAYRCITSYETESMEKFSLCVLQKHNCMCNSAEIPVLPDPAPQTKFRGQALTHETAQDLFMGWLGKEAFSWKVVCGQNPAYDFFPSQHQIFYRGRGKGQMWYDPVFKVVTIKGEEVWRRRHYRVKSAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGALLVSRDGDWPEEK-EMERVEKAFDSCGIKLWELFPV 1320
++ +K +L +T+ YER S++DL +L LVL D+ V VPRV+ G S P + CML NC +EV +C D CRA + CL C NDQ VC+Y+CI SYE+E EKFS CVLQKHNCM SA++P LP+ P +FRG ALTHE A+++ +GWLG+E SWKVV GQN AYD FP+QHQIFYRG+ K WYDPVF+ T G+ VWRRRHYRV+ +PGTF FSVLDNGV+S+EYWRI D +DDLSW V YY+GAA+AAGQ+YTGA+ VSR G WP+++ ++ER+E+A D CGIK+WELF V
Sbjct: 60 TTARRKRALLLETVRTLYERKSADDLLYLVLVLIDACVRPVPRVSMDASGGSSLP-LVWCMLTNCGREVWDCVSDETCRAALDCLAGCGLNDQ-------------------------------VCSYQCIVSYESELFEKFSKCVLQKHNCMRKSAKVPRLPEVEPMHEFRGSALTHEVAEEILIGWLGEERHSWKVVTGQNAAYDVFPNQHQIFYRGKRKRSFWYDPVFQARTFDGDLVWRRRHYRVRRGRSPGTFHFSVLDNGVISDEYWRIADAADDLSWAVLYYSGAASAAGQAYTGAVFVSRTGRWPDDRSQLERIERAHDKCGIKMWELFEV 366
BLAST of mRNA_P-littoralis_Contig130.124.3 vs. uniprot
Match: A0A2K1K5M2_PHYPA (VDE domain-containing protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K5M2_PHYPA) HSP 1 Score: 358 bits (918), Expect = 4.310e-109 Identity = 177/359 (49.30%), Postives = 229/359 (63.79%), Query Frame = 1
Query: 283 DFLRDLVGGASSGTKKDRV-LWDTLTGFYERNSSEDLTFLSLVLADSYVTTVPRVTGIGKDSNPDTLDCMLDNCKQEVINCAKDPACRACISCLTACPPNDQARQKIIKKIIIIKSGGREREKKKSYLYHMYRVCAYRCITSYETESMEKFSLCVLQKHNCMCNSAEIPVLPDPAPQTKFRGQALTHETAQDLFMGWLGKE---------AFSWKVVCGQNPAYDFFPSQHQIFYRGRGKGQMWYDPVFKVVTIKGEEVWRRRHYRVKSAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGALLVSRDGDWPEEKEMERVEKAFDSCGIKLWELFPVRTA 1329
D + ++G +KD + + + +ER SS+D+ F LVL DSYVT V + + S ++ CM+ NC+ ++++C DP CR ++CL +C P DQ VC+YRCI SYE+E +E F+LCVLQKHNC+ SA+I + PD P FRG +THE A+DLF+GWLG+ +SW+VV GQN AYD FP Q QIFYRG+ KG MWYDPVF+V T+ G+ VWRRRHYRVK V PGTF F+VLDNGV+S E+WRI+DV DDLSWG+FYY+GAA AAGQSYTGA+LV++DG WP E E R+ A D CGIK+WEL+ V A
Sbjct: 207 DQVEKMLGSFPGSKRKDAMKVLSLVEEAWERKSSDDVRFALLVLIDSYVTPVTLLKNLRATSLA-SVQCMVKNCRSQILSCILDPNCRQALNCLQSCAPTDQ-------------------------------VCSYRCIVSYESEKLEAFTLCVLQKHNCLGLSADILMQPDVQPMKLFRGNPVTHEIAEDLFIGWLGRPNPDSLATPLKYSWRVVAGQNAAYDQFPCQFQIFYRGKAKGSMWYDPVFQVQTLDGKLVWRRRHYRVKRDVVPGTFYFTVLDNGVISKEFWRIVDVKDDLSWGLFYYSGAAAAAGQSYTGAILVTQDGSWPPESEAIRLNSALDKCGIKVWELYRVNNA 533
BLAST of mRNA_P-littoralis_Contig130.124.3 vs. uniprot
Match: A0A7S2Z7P6_9CHLO (Hypothetical protein n=2 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z7P6_9CHLO) HSP 1 Score: 355 bits (912), Expect = 1.490e-108 Identity = 176/344 (51.16%), Postives = 219/344 (63.66%), Query Frame = 1
Query: 295 DLVGGASSGTKKDRVLWDTLTGFYERNSSEDLTFLSLVLADSYVTTVPRV--TGIGKDSNPDTLDCMLDNCKQEVINCAKDPACRACISCLTACPPNDQARQKIIKKIIIIKSGGREREKKKSYLYHMYRVCAYRCITSYETESMEKFSLCVLQKHNCMCNSAEIPVLPDPAPQTKFRGQALTHETAQDLFMGWLGKEAFSWKVVCGQNPAYDFFPSQHQIFYRGRGKGQMWYDPVFKVVTIKGEEVWRRRHYRVKSAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGALLVSRDGDWPEEKEMERVEKAFDSCGIKLWELFPV 1320
DL GG + + + L +++ + R + +DL FL L+L D+ V VPRV T G + + CML NC++EV+ C DP C+A + CLT C NDQ VC+Y+CI S+E+ E+FS CVLQ+HNCM N+AE+P P P +FRGQ LTHE A+++ +GWLGKE SWKVV GQN AYD FP+QHQIFYRG+ K WYDPVF+ GE VWRRRHYRV+ PGTF FSVLDNGV+SNE+WRI D +DDL+W V YYAGAA+AAGQ+YTGA+ +RDG WP E E RVE A CGIKLWELF V
Sbjct: 203 DLFGGLA---RAEAALAESVRELWRRKNFDDLLFLLLLLIDACVEPVPRVSMTAGGGGGSLGLIWCMLTNCREEVVACVTDPECKAALDCLTGCGLNDQ-------------------------------VCSYQCIVSHESPLFERFSQCVLQRHNCMKNAAEVPAEPVVEPMAEFRGQPLTHEAAEEILIGWLGKERHSWKVVTGQNAAYDIFPNQHQIFYRGKRKRSFWYDPVFQARKFDGELVWRRRHYRVRRGKVPGTFYFSVLDNGVISNEFWRIADAADDLTWTVLYYAGAASAAGQAYTGAVFATRDGQWPAESEFARVEAAHAKCGIKLWELFEV 512
BLAST of mRNA_P-littoralis_Contig130.124.3 vs. uniprot
Match: A0A2P6V3H5_9CHLO (Violaxanthin de-epoxidase-related n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V3H5_9CHLO) HSP 1 Score: 350 bits (897), Expect = 5.210e-107 Identity = 194/429 (45.22%), Postives = 246/429 (57.34%), Query Frame = 1
Query: 103 IFLGSAVQDSATAEWIATVVEEAGVKTRFSAGCPPELARASALG-------AFRPF--PPAPALVRMLPDFLRDLVGGASSGTKKDRVLWDTLTGFYERNSSEDLTFLSLVLADSYVTTVPRVTGIGKDSNP--DTLDCMLDNCKQEVINCAKDPACRACISCLTACPPNDQARQKIIKKIIIIKSGGREREKKKSYLYHMYRVCAYRCITSYETESMEKFSLCVLQKHNCMCNSAEIPVLPDPAPQTKFRGQALTHETAQDLFMGWLGK--------------EAFSWKVVCGQNPAYDFFPSQHQIFYRGRGKGQMWYDPVFKVVTIKGEEVWRRRHYRVKSAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGALLVSRDGDWPEEKEME-RVEKAFDSCGIKLWEL 1311
+ LG V+D TA +A ++ A +T GC LA A+ L A P P AP L R+ PD T+ D + + Y RNSS+D F+ LVL ++Y+ VP V+ K N D+L CM+ C ++ C DP C+A + CL C NDQ VC YRCITSYE+ +E FSLC++QKHNC +A+IP++PDPAP T +RG+ LTHE A+DLF+GWL + E FSW+V G+N AYDFFP Q Q+FYRG+GKG MWYDP F+V T+ G VWRRRHYRVK PGTFRFSVLDNGV SNEYWRI+D ++DL W VFYY+GAA+ AG SY+GA+L S+DG WP +E R+EK GIK WEL
Sbjct: 74 VVLG--VEDPETAALLAPLLSAA--RTAVPLGCAVPLAGATRLAGRHVGDAADGPTLNPLAPLLQRLFPD----------KQTELDGQVLKIVEDLYRRNSSDDFVFIFLVLTNAYINQVPAVSMTFKQKNAGLDSLACMVGKCGGQIFRCVTDPTCKAALDCLQGCEFNDQ-------------------------------VCTYRCITSYESPLLEDFSLCIIQKHNCFGLTADIPMVPDPAPLTTWRGEPLTHELAEDLFIGWLKEDPSSSLHEEISGAGELFSWRVFAGKNAAYDFFPCQFQLFYRGKGKGGMWYDPTFQVETLNGRRVWRRRHYRVKRGQVPGTFRFSVLDNGVTSNEYWRILDCAEDLGWCVFYYSGAASRAGLSYSGAILASKDGQWPASEEARTRIEKLLAGAGIKPWEL 457
BLAST of mRNA_P-littoralis_Contig130.124.3 vs. uniprot
Match: A0A8J9SBB6_9CHLO (Probable violaxanthin de-epoxidase, chloroplastic n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SBB6_9CHLO) HSP 1 Score: 349 bits (895), Expect = 2.630e-106 Identity = 183/421 (43.47%), Postives = 246/421 (58.43%), Query Frame = 1
Query: 61 DERTRFADLAGGTDIFLGSAVQDSATAEWIATVVEEAGVKTRFSAGCPPELARASALGAFRPFPPAPALVRMLPDFLRDLVGGAS-SGTKKDRVLWDTLTGFYERNSSEDLTFLSLVLADSYVTTVPRVTGIGKDSNPDTLDCMLDNCKQEVINCAKDPACRACISCLTACPPNDQARQKIIKKIIIIKSGGREREKKKSYLYHMYRVCAYRCITSYETESMEKFSLCVLQKHNCMCNSAEIPVLPDPAPQTKFRGQALTHETAQDLFMGWLGKEAFSWKVVCGQNPAYDFFPSQHQIFYRGRGKGQMWYDPVFKVVTIKGEEVWRRRHYRVKSAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGALLVSRDGDWPEEKEMERVEKAFDSCGIKLWELFPV 1320
D + F A I +Q+ A+ +A A F C P+L + LG P P + L G + + + L ++ +ER+SS+DL L LVL D+++ VPR+ + + S P L M+ NC ++ C DP C+A + CL +C P DQ VC+YRCI S+E++ +E FSLC+LQKHNC+ SA+IP LPDP P FRG+AL+H+ A+ LF+GWLG+E +SW+VV GQN AYD FP Q+QIFYRG+ K +WYDPVF+V T+ G VWRRRHYRV+ A PGTF FSVLDNGV+S E+WRI+DV DDLSW +F Y+GAA+AAGQ YTGA+L + DG WP + + ER+ +A GI+ WELF V
Sbjct: 99 DRQAAFMQSAAAARIVYAEGIQNGEAAKTLAEATGRAPTFVAFD--CVPQLHALNRLGGLPSTDPGP---------WQQLQAGLPWTPAARAQELAKSIQTLWERHSSDDLVSLFLVLIDAFIVKVPRLDSL-RASGPLALARMIKNCGPQIFACVNDPDCKAALDCLQSCSPTDQ-------------------------------VCSYRCIVSHESQLLEDFSLCILQKHNCLGKSADIPALPDPPPMGSFRGRALSHDLAEALFIGWLGREEWSWRVVAGQNAAYDQFPCQYQIFYRGKAKRSLWYDPVFQVRTLDGRTVWRRRHYRVRRAEIPGTFHFSVLDNGVISKEFWRIVDVPDDLSWALFAYSGAASAAGQVYTGAVLCTPDGIWPADSQEERINRALRLSGIEPWELFRV 476
BLAST of mRNA_P-littoralis_Contig130.124.3 vs. uniprot
Match: A0A6J0N021_RAPSA (uncharacterized protein LOC108848422 n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0N021_RAPSA) HSP 1 Score: 348 bits (893), Expect = 8.560e-106 Identity = 175/350 (50.00%), Postives = 222/350 (63.43%), Query Frame = 1
Query: 280 PDFLRDLVGGASSGTKKDRV---LWDTLTGFYERNSSEDLTFLSLVLADSYVTTVPRVTGIGKDSNPDTLDCMLDNCKQEVINCAKDPACRACISCLTACPPNDQARQKIIKKIIIIKSGGREREKKKSYLYHMYRVCAYRCITSYETESMEKFSLCVLQKHNCMCNSAEIPVLPDPAPQTKFRGQALTHETAQDLFMGWLGKEAFSWKVVCGQNPAYDFFPSQHQIFYRGRGKGQMWYDPVFKVVTIKGEEVWRRRHYRVKSAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGALLVSRDGDWPEEKEMERVEKAFDSCGIKLWELFPV 1320
P+ + L G KD+ + T+ +ER +S+D+ F LV+ ++YV VP + + + TL CM+ NC +++NC DP CR + CL C P DQ VC+YRCI SYE+ E FSLCVLQKHNC+ A+IP P P T FRG+ L HETA+DLF+GWLG +SW+VV GQNPAYD FP Q+Q+FYRG+GK WY+PVF+V T++G+ VWRRR Y VK TP TFR SVLDNGVVSNE+W I+DVSDDLSWG+F+Y GAA AGQSYTGA+LV+ DG +PEEKE ER++ A + CGIK WELF V
Sbjct: 173 PELMNRLGGTDFRSGDKDKEGTEIVKTVGDAWERRNSDDIRFCLLVIINAYVRPVPVLQNL-RSKGFSTLGCMVKNCGPQILNCLLDPNCRKALQCLNKCSPVDQ-------------------------------VCSYRCIASYESPYFEAFSLCVLQKHNCLELDAKIPDKPYVPPMTSFRGKELCHETAEDLFVGWLGDLDWSWRVVAGQNPAYDQFPCQYQLFYRGKGKSSFWYEPVFQVRTLEGKLVWRRRRYSVKRGKTPATFRLSVLDNGVVSNEFWTIVDVSDDLSWGLFHYNGAARVAGQSYTGAVLVAPDGSYPEEKERERLQSALEKCGIKEWELFAV 490
BLAST of mRNA_P-littoralis_Contig130.124.3 vs. uniprot
Match: D8QN47_SELML (VDE domain-containing protein (Fragment) n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QN47_SELML) HSP 1 Score: 345 bits (885), Expect = 2.030e-105 Identity = 188/419 (44.87%), Postives = 245/419 (58.47%), Query Frame = 1
Query: 64 ERTRFADLAGGTDIFLGSAVQDSATAEWIATVVEEAGVKTRFSAGCPPELARASALGAFRPFPPAPALVRMLPDFLRDLVGGASSGTKKDRVLWDTLTGFYERNSSEDLTFLSLVLADSYVTTVPRVTGIGKDSNPDTLDCMLDNCKQEVINCAKDPACRACISCLTACPPNDQARQKIIKKIIIIKSGGREREKKKSYLYHMYRVCAYRCITSYETESMEKFSLCVLQKHNCMCNSAEIPVLPDPAPQTKFRGQALTHETAQDLFMGWLGKEAFSWKVVCGQNPAYDFFPSQHQIFYRGRGKGQMWYDPVFKVVTIKGEEVWRRRHYRVKSAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGALLVSRDGDWPEEKEMERVEKAFDSCGIKLWELFPV 1320
E F+ DI LG + + T WI + + V TR + LG + P + D LR +V G K + D +T + R+SS+++ F LVL DSYV VP + + + ++ + CM NC +E++ C DP+CR + CLT+C PNDQ VC+YRCI SYET ++E SLC+LQK+NC+ SAEI P P KFRGQ LTH A+D+F+GWLG +SW+V GQN AYD F +Q Q++YRG K MWYDPVF+V T++GE VWRRRHYR + PGTF F+VLDNGVVS E+WRI+D +DDLSWG+FYY+GAATAAGQSY+GA+LVS DG WP E+ ERV A CGIKLWE++ V
Sbjct: 54 ENREFSSAVAKADILLGLGLGNPDTVSWINSA--SSSVPTRICFDSTDN--SGTWLGGVKVLP-----LESPVDRLRSIVPGTKLA--KGLKVLDLVTNAWSRHSSDNVCFALLVLIDSYVAPVPLLKNL-RATSLSQIQCMAKNCGKEILACLLDPSCRKALDCLTSCAPNDQ-------------------------------VCSYRCIVSYETPTLEAISLCILQKNNCLGLSAEIQSQPVVKPLEKFRGQELTHTLAEDIFIGWLGTLKWSWRVAAGQNAAYDHFANQIQLYYRGT-KNSMWYDPVFQVETLEGELVWRRRHYRARRGEVPGTFYFTVLDNGVVSKEFWRIVDCADDLSWGLFYYSGAATAAGQSYSGAVLVSPDGMWPGEQHSERVNAALGRCGIKLWEMYTV 428
BLAST of mRNA_P-littoralis_Contig130.124.3 vs. uniprot
Match: A0A2R6RJR5_ACTCC (Violaxanthin de-epoxidase n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6RJR5_ACTCC) HSP 1 Score: 347 bits (891), Expect = 2.390e-105 Identity = 165/333 (49.55%), Postives = 221/333 (66.37%), Query Frame = 1
Query: 322 TKKDRVLWDTLTGFYERNSSEDLTFLSLVLADSYVTTVPRVTGIGKDSNPDTLDCMLDNCKQEVINCAKDPACRACISCLTACPPNDQARQKIIKKIIIIKSGGREREKKKSYLYHMYRVCAYRCITSYETESMEKFSLCVLQKHNCMCNSAEIPVLPDPAPQTKFRGQALTHETAQDLFMGWLGKEAFSWKVVCGQNPAYDFFPSQHQIFYRGRGKGQMWYDPVFKVVTIKGEEVWRRRHYRVKSAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGALLVSRDGDWPEEKEMERVEKAFDSCGIKLWELFPV 1320
T + + T++ +ER++S+D+ F L++ ++Y+ VP + + + TL+CM+ NC +++NC DP CR + CL C P DQ VC YRCI SYE++++E+FSLCVLQKHNC+ A+IP P P KF+G+ L+HE A+DLF+GWLGK +SW+VV GQNPAYD FP Q+Q+FYRG+ +G WY+PVF+V+T++GE VWRRR YRVK PGTF FSVLDNGVVSNE+W I+DVSDD SWG+F+Y GAA AGQSYTGA+LVS +G++P E+E + A D CGIK WELF V
Sbjct: 206 TNESMEVIGTISEAWERHNSDDIRFCLLIIVNAYIRPVPILKNL-RAKGFSTLNCMVTNCGSQILNCLLDPNCRKALQCLNQCSPVDQ-------------------------------VCNYRCIASYESQTLEEFSLCVLQKHNCLELDAKIPTKPQVPPMVKFQGEDLSHEIAEDLFVGWLGKLEWSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFQVMTLEGELVWRRRKYRVKRGKIPGTFYFSVLDNGVVSNEFWTIVDVSDDFSWGLFHYHGAARVAGQSYTGAVLVSPNGEYPNERERLSLVSALDRCGIKEWELFTV 506 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig130.124.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig130.124.3 >prot_P-littoralis_Contig130.124.3 ID=prot_P-littoralis_Contig130.124.3|Name=mRNA_P-littoralis_Contig130.124.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=381bp MLPDFLRDLVGGASSGTKKDRVLWDTLTGFYERNSSEDLTFLSLVLADSYback to top mRNA from alignment at P-littoralis_Contig130:501329..506347- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig130.124.3 ID=mRNA_P-littoralis_Contig130.124.3|Name=mRNA_P-littoralis_Contig130.124.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=5019bp|location=Sequence derived from alignment at P-littoralis_Contig130:501329..506347- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig130:501329..506347- >mRNA_P-littoralis_Contig130.124.3 ID=mRNA_P-littoralis_Contig130.124.3|Name=mRNA_P-littoralis_Contig130.124.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1143bp|location=Sequence derived from alignment at P-littoralis_Contig130:501329..506347- (Pylaiella littoralis U1_48)back to top |