prot_P-littoralis_Contig130.113.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig130.113.4
Unique Name	prot_P-littoralis_Contig130.113.4
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	589

Homology

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BLAST of mRNA_P-littoralis_Contig130.113.4 vs. uniprot
Match: A0A6H5KM79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM79_9PHAE)

HSP 1 Score: 541 bits (1394), Expect = 4.010e-184
Identity = 296/462 (64.07%), Postives = 339/462 (73.38%), Query Frame = 0

Query:   74 GPKGLTSLSISRNDSLSPAAYSTESGERAIKETVPAAFVNTLESRYLSPSTRCLTPDHERAAKGLHSPGPGTYYPSFEAWDFAPPYEWNRVNKAEKACRNSKTRTYNTKLPWGEPTMPRSPHPARAAEMPTEEERAWLSKRRGSIRPSTAPRCIWVSGVSTRGGLQAWGDIATKTGPIHVGRKGDCSHPWDRPTPRRGPDSQRRGPVHSCEARATSPGFREVRHLNHDLTRQTAGAAMETPGPGQYNIRPPLQRGTSFAGPRPATACSANRNNLLARTVGLFEASAKLSVAS-ARAGETERGSAAGRRRACRPSPPAARSQRLSAPLMGRESPGPAYKLPSDFDQKLVNKKTFHPPRCDGGKTKSSRSTDKPRKKGGNANSGSAHEP---AREGRAEGLPRARRELSNF-LAQSGGCGAVGRALAVPVSTSMGRGFLLRIRADNMVFVRLPWGVLYTAEFLT 530
            G  GLTSLS   N  +SPA Y+T+ GERA+KE  PAA VNTLESRYLSPSTRCLTP HER AKG  SPGP  YYP  EAWDF PP  WNRVNK++K  R   +R++N K+ WGE TMPR P+P +AA++PT+EERAWLSKRRG+ RPSTAPRC+W++GV+TRGGLQAWGD+AT TGPIHVG KG+C+ PWDRPTPRRGPDSQRRGP+HS E RATSPGFRE R+LN DLTR+ A  A +TPGPGQY+IRPPL+RGTSFAGPR  T CS       A TV    ASAK   AS  +    + G   G  R  RPS   A SQRLS PL GRESPGPAY LPSDFDQK VNKKTFHPPRC G    S   T++PR  G +AN     +     R  + + LP+ARRE S+  +A+SG   A+GRAL VPV+T MGRG LLRIRAD M FVRLPWGVLYT E LT
Sbjct:  107 GTAGLTSLSAG-NAFVSPATYTTQPGERAVKEKAPAAVVNTLESRYLSPSTRCLTPSHEREAKGAQSPGPAVYYPH-EAWDFGPPKHWNRVNKSDKPGRMPSSRSFNAKVTWGEATMPRPPNPVKAAQIPTKEERAWLSKRRGTARPSTAPRCMWLNGVNTRGGLQAWGDVATNTGPIHVGNKGNCASPWDRPTPRRGPDSQRRGPIHSREVRATSPGFRETRYLNRDLTRKGACKATDTPGPGQYSIRPPLERGTSFAGPRRPTKCSK------AATVNAMVASAKGRAASYEKTSGAKNGMVRGGDRQSRPS--TAPSQRLSIPLKGRESPGPAYALPSDFDQKFVNKKTFHPPRCTG---TSPFGTEEPRGTGRSANLAPRADEDGHVRAKQTKRLPKARREASSGPVAKSGRVDAIGRALGVPVNTCMGRGILLRIRADGMTFVRLPWGVLYTTEVLT 555

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig130.113.4 vs. uniprot

BLAST of mRNA_P-littoralis_Contig130.113.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KM79_9PHAE	4.010e-184	64.07	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 416..446
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 563..588
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 370..470
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 545..588
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..337

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig130	contig	P-littoralis_Contig130:463391..468306 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig130.113.4	mRNA_P-littoralis_Contig130.113.4	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig130 463225..468539 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig130.113.4 ID=prot_P-littoralis_Contig130.113.4|Name=mRNA_P-littoralis_Contig130.113.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=589bp
MVLFGAYNTAERFVDDDRLAAHFPGPGSYPFKSVVEGAPVPRYAKKLVED
GVVRPDGSAIVFRERDGWVRGVEGPKGLTSLSISRNDSLSPAAYSTESGE
RAIKETVPAAFVNTLESRYLSPSTRCLTPDHERAAKGLHSPGPGTYYPSF
EAWDFAPPYEWNRVNKAEKACRNSKTRTYNTKLPWGEPTMPRSPHPARAA
EMPTEEERAWLSKRRGSIRPSTAPRCIWVSGVSTRGGLQAWGDIATKTGP
IHVGRKGDCSHPWDRPTPRRGPDSQRRGPVHSCEARATSPGFREVRHLNH
DLTRQTAGAAMETPGPGQYNIRPPLQRGTSFAGPRPATACSANRNNLLAR
TVGLFEASAKLSVASARAGETERGSAAGRRRACRPSPPAARSQRLSAPLM
GRESPGPAYKLPSDFDQKLVNKKTFHPPRCDGGKTKSSRSTDKPRKKGGN
ANSGSAHEPAREGRAEGLPRARRELSNFLAQSGGCGAVGRALAVPVSTSM
GRGFLLRIRADNMVFVRLPWGVLYTAEFLTRVHVVSGRASVSSIDPDVPN
SDSGGMGHVAEDSVASTKKEGRRHEDVQFTLDSPADKA*