mRNA_P-littoralis_Contig130.102.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig130.102.1
Unique NamemRNA_P-littoralis_Contig130.102.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig130.102.1 vs. uniprot
Match: D8LC79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC79_ECTSI)

HSP 1 Score: 1164 bits (3012), Expect = 0.000e+0
Identity = 592/868 (68.20%), Postives = 682/868 (78.57%), Query Frame = 1
Query:    1 MHLEIVEVLALAGEGAGSQHWSRNAAQPRYSLSGDDAKESSCIHSFTCFDVAERVEADHDVVFAGRSNGAVVLWRMVTRNLFGGANKNDRVEETLVTSSPHRGAVTCLIHTRPGTYSALAGPLVFSGSNDHTIKVWNAWASAPFKETCLQTIAEHRGGVTALAFAGDATLISTARDGSVRLWRPQRGRNLLRFPFFCCVKCLSLYP-AIGGGKSRSIGVGQPRVFADVWATAACIAGGDTWTLYCGDSDGTISVFQRAPASAAERLANARRKHSDSLAMEQLADNEVTLRRRWTHLHSLAITGLVLVSEHNFLLSMGNDGACRVLDYIQGNTFMTIENNDHHIFTSVAWDLAHEQLVLADDAGVVQVWNTYTESLLLKTKVAKAVSSTGPRKGQALKALLGFHSSKADDMLYGMSPSEGCFFRWKMVKADGSTLIGRHDDSILGLDFQGAAALAGQQNC---DGYLDRTTVDVTTAERQLDGEKLVVKQKNGGGTSVTKSSQKRVEQRFSAQDG----------HSSAGGVGRDDGSDKEATEDDGED--------------EVSFGLVVLSASMDGTISAWEMLGKSEKYRMRQPAGVEVTSMLVLTGGSVLVTGTDDGSVRFWRLDTGAGESFKTHENTVSALAAYRDRQGSITLASAGFEGSIAIWRARAKDGLKQKTIPTVDFSVHRAHGTTNGEDAEILCLAFVAADMPLLISAGNDRLIRCWSFREHSCTLISILEGHKDSIEALVADGLFLLSGSYDGEVRVWNFSSVEQKDKSNIGMSTSSRDEVGETDATAALGVIKAHPNGVAGMAIMASSRKSCANFVEGREKGEDAGGFLVTCGNTEGVVRIWDYTHVCDGSTCGR 2520
            MHLE+VEVLALAGEGA   HWSRN A+PRYSL  D+AK++S  HSFTCFDVAERVEADHD+VFAGRSNGAVVLWRMV RN+FGGANKNDRV+E L+T+SPHRGAVTCL HTR GTY +L GPL+FSGS DHT+KVWNAWA  PFKE CLQT+AEHRGGVTALAFAGD TLISTARDGSVRLWRPQRGR LLRFPFFCCVKCLS+YP A+G G SRSIG GQP  F  VW TAAC+AGG+TWT YCGDS+GT+SVFQRAP SAA+RLANAR K SD L M QLAD+EVTL RRWTHLHSLAITGLVLV+EHNFLLS+GNDGACRVLDY+QGNTFMTIE++ H +FTSVAWDLAHEQLVLAD +GVVQVWNTYTESLLLK KVAKAV+  GPRKGQ+LKAL+GFHSSKAD M+YGMSPSEGCFFRWK+VKA+ S LIGRHDDSILGL FQGA+A   ++N    DG +D         + +   EK  V + +G  T+V  ++ K +E      DG          H S GGV     SD EA+E+                  E  FGLVVLSASM+G I AWE LGKSEKY MR   GVEVTSMLVL GGSVLVTGTDDGSVRFW+LDTGAGESF+ H+NTVSALAAYRD+ GS+ LASAGFEG+I IWRA AKDGLK+  +PTVD+ V  AHG  +G D EILCLAFVA+D+P+L SAGNDR++RCW  RE +C L+ +LEGH+DSIEALV+DGLFL SGS DG VR+WN S++  +D  ++G ++  R E+G T+ T  +G  KAHPNGV+GMA+M S R S  + V    + ++AGG + TCG  EG+V+IWDYTHV D  TCGR
Sbjct:    1 MHLEVVEVLALAGEGAAGSHWSRNTARPRYSLGTDEAKQASFHHSFTCFDVAERVEADHDIVFAGRSNGAVVLWRMVARNMFGGANKNDRVQEPLITASPHRGAVTCLTHTRQGTYGSLIGPLMFSGSADHTVKVWNAWAGPPFKEACLQTMAEHRGGVTALAFAGDTTLISTARDGSVRLWRPQRGRKLLRFPFFCCVKCLSVYPTAVGRGMSRSIGAGQPGAFVHVWPTAACVAGGETWTFYCGDSNGTVSVFQRAPTSAAKRLANAR-KTSDILTMNQLADDEVTLHRRWTHLHSLAITGLVLVAEHNFLLSVGNDGACRVLDYLQGNTFMTIESDGHSLFTSVAWDLAHEQLVLADASGVVQVWNTYTESLLLKKKVAKAVTYIGPRKGQSLKALMGFHSSKADGMMYGMSPSEGCFFRWKLVKAESSVLIGRHDDSILGLGFQGASAFPSRRNAPSNDGGIDVAGRAGNVQKLEDRSEKKNVYESDGSCTAVVGTTCKELEGTGLESDGDKRPTDQRGSHGSMGGVAEIHNSDTEASEEXXXXXXXXXXXXXXXXXXEAGFGLVVLSASMNGVIRAWETLGKSEKYCMRHSGGVEVTSMLVLPGGSVLVTGTDDGSVRFWQLDTGAGESFQAHDNTVSALAAYRDQLGSLVLASAGFEGAIIIWRAHAKDGLKKDRVPTVDYCVRDAHGALDGLDGEILCLAFVASDVPVLASAGNDRVVRCWRLRERTCILLLVLEGHEDSIEALVSDGLFLFSGSCDGAVRIWNVSNLGHEDNVSLGDNSRHRGEMGRTE-TMMVGAFKAHPNGVSGMAVMTSERNSRVDVVYAGRESQEAGGLIATCGKAEGIVKIWDYTHVEDDGTCGR 866          
BLAST of mRNA_P-littoralis_Contig130.102.1 vs. uniprot
Match: A0A6H5JSR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR9_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 4.640e-88
Identity = 174/400 (43.50%), Postives = 208/400 (52.00%), Query Frame = 1
Query: 1531 HSSAGGVGRDDGSDKEATEDDGED--------------EVSFGLVVLSASMDGTISAWEMLGKSEKYRMRQPAGVEVTSMLVLTGGSVLVTGTDDGSVRFWRLDTGAGESFKTHENTVSALAAYRDRQGSITLASAGFEGSIAIWRARAKDGLKQKTIPTVDFSVHRAHGTTNGEDAEILCLAFVAADMPLLISAGNDRLIRCWSFREHSCTLISILEGHKDSIEALVADGLFLLSGSYDGEVRVWNFSSVEQKDKSNIGMSTSSRDEVGETDATAALGVIKAHPNGVAGMAIMASSRKSCANFVEGREKGEDAGGFLVTCGNTEGVVRIWDYTHVCDGSTCGRLVAEVRSHDEALFTCVACTQDPSGEPLLFAGTNKGSILQLAFDSIEDDGINGDREE 2688
            H S GGV     SD+EA+E+                  E  FGLVVLSAS++G I AWE LGKSEKY MR   G EVTSMLVL GGSVLVTGTDDGSVRFW+LDTGAGESFK H+NTVSALAAYRD+ GS+ LASAGFEG+I IWRA AKDGLK+  +PTV++ V  AHG  +G D EILCLAFVA+D+P+L SAGNDR++RCW  RE +C L+ +LE                                                                                                                          +  RL++E RS DE+LF CVACTQD  G+PLLFAGTN+GSI+QLAF  I++  I  + E+
Sbjct:   52 HGSVGGVAEIHNSDREASEEXXXXXXXXXXXXXXXXXGEAGFGLVVLSASLNGVIRAWETLGKSEKYCMRHSGGAEVTSMLVLPGGSVLVTGTDDGSVRFWQLDTGAGESFKAHDNTVSALAAYRDQLGSLVLASAGFEGAIIIWRAHAKDGLKKDRVPTVEYCVRDAHGVLDGLDGEILCLAFVASDVPVLASAGNDRVVRCWRLRERTCILLLVLE-------------------------------------------------------------------------------------------------------------------------VSLARLISEFRSQDESLFNCVACTQDTLGKPLLFAGTNEGSIIQLAFSGIDEGHIEDEHED 330          
BLAST of mRNA_P-littoralis_Contig130.102.1 vs. uniprot
Match: A0A2P4YF63_9STRA (WD40 repeat-like protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YF63_9STRA)

HSP 1 Score: 147 bits (370), Expect = 6.190e-33
Identity = 174/681 (25.55%), Postives = 284/681 (41.70%), Query Frame = 1
Query:  184 VFAGRSNGAVVLWRMVTRNLFGGANKNDRVEETLVTSSPHRGAVTCLIHTRPGTYSALAGP--LVFSGSNDHTIKVWNAWAS--APF----KETCLQTIAEHRGGVTALAFAGDAT--LISTARDGSVRLWRPQRGRNLLRFPFFCCVKCLSLYPAIGGGKSRSIGVGQPRVFADVWATAACIAGGDTWTLYCGDSDGTISVFQRAPASAAERLANARRKHSDSLAMEQLADN-----EVTLRRRWTHLHSLAITGLVLVSEHNFLLSMGNDGACRVLDYIQGNTFMTIENNDHHIFTSVAWDLAHEQLVLADDAGVVQVWNTYTESLLLKTKVAKAVSSTGPRKGQALKALLGFHS----SKADDMLYGMSPSEGCFFRWKMVKADGSTLIGRHDDSILGLDFQG-AAALAGQQNC-DGYLDRTTVDVTTAERQLD---GEKLVVKQKNGGGTSVTKSSQKRVEQRFSAQDGHSSAGGVGRDDGSDKEATEDDGEDEVSFGLVVLSASMDGTISAWEM----LGKSEKYR--MRQPAGVEVTSM-------LVLTGGSVLVTGTDDGSVRFWRLDTGAGE-SFKTHENTVSALAAYRDRQGSITLASAGFEGSIAIWRARAKDGLKQKTIPTVDFSVHR--AHGTTNGEDAEILCLAFVAADMPLLISAGNDRLIRCWSF 2106
            +F GR +GA++ W +           N        T   H GAV  L       ++   GP  L+FSGS D +IK+W+ W     P     +  C+QT++EH G V  L      +  +IS + D +V+ W P  GR LL +P++   + +S                QP      W +A C+  G   TL+ GDS G ISV+  +   A E + +      D +  +QL D+     +  LRR+++H HSL I+ L +V+++ F++S+G D   +++D I G    TI +     F S  WD   + L+L D AG V +WN + + LL + ++     +T P       A++G HS    S  D +L G +       +W   +  G      H DS+     Q  + +L G   C D Y  + + +    + ++      K   K   G    V K         +S   G  S   + R     K A        V    ++L+  +DGT+S WE+    + ++  ++  +++    EVTS+       L   G    + G   G +  W     A   SFK H N V +LA +        L S   +  + +W              T +  V R  +  +++G  + I+CL  V     L++SA  D  +  W +
Sbjct:   19 IFGGRHDGAIMHWPISPTPSVTTPCAN--------TMRGHAGAVLTL------DFAPDLGPEGLLFSGSADRSIKIWDPWGGLDTPLPSRNRYACVQTLSEHCGSVVCLRVLTHQSHAIISCSLDRTVKTWYPTEGRGLLLYPWYLPAQSIS----------------QP---GSSWPSAFCVRSGANGTLFIGDSAGGISVYANSSGKANEIVPD---NAIDIVDYKQLGDHFDEKFQWALRRKFSHFHSLGISKLQVVADNCFVVSLGFDEKAQIIDAISGALSATISSAGAARFISCTWDDQGQILLLGDVAGYVHLWNMFDDKLLARRQMI----TTAPL------AIVGMHSFTGTSGGDFLLIGQASGVK---QWLCNRNVGYVNCNGHSDSVSAKTSQFFSVSLDGSIRCWDSYEMKVSFEFEEKDSEITCMVASKQFHKLFTGHDCGVVKV--------WSIYAGKLSELSLER-----KNAITCLAVGVVRNQEILLAGGIDGTVSTWEINCDDISRAGPFQPTLQKEKKEEVTSLAFCKGSFLAQDGQEFFIVGYSSGQIVMWNFSKKAVVCSFKAHNNGVCSLALH-----GCFLFSGSDDTLLRMWNMF-------NPPETYELGVLRPPSSSSSSGSGSPIVCLDVVPF-RGLVLSAAADGTLLVWDY 624          
BLAST of mRNA_P-littoralis_Contig130.102.1 vs. uniprot
Match: A0A835ZBD8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBD8_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.890e-31
Identity = 142/558 (25.45%), Postives = 196/558 (35.13%), Query Frame = 1
Query:  835 EQLADNEVTLRRRWTHLHSLAI--------------TGLVLVSEHNFLLSMGNDGACRVLDYIQGNTFMTIENNDHH----------------------------IFTSVAWDLAHEQLVLADDAGVVQVWNTYTESLLLKTKVAKAVSSTGPRKGQALKALLGFHSSKA--------DDMLYGMSPSEGCF-------------------FRWKMVKADGSTLIGRHDDSILGLDFQGAAALAGQQNC---DGYLDRTTVDVTTAERQLDGEKLVVKQKNGGGTSVTKSSQKRVEQRFSAQDGHSSAGGVGRDDGSDKEATEDDGEDEVSFGLVVLSASMDGTISAWEMLGKSEKYRM-------------------------------------------RQPAGVEVTSMLVLTGGSVLVTGTDDGSVRFWRLDTGAGESFKTHENTVSALAAYRDRQ-GSITLASAGFEGSIAIWRARAKDGLKQKTIPTVDFSVHRAHGTTNGE-----------------DAEILCLAFVAADMPLLISAGNDRLIRCWSFR 2109
            E +   +V   +RW  LH+L                T L +V+EH FL S G DG  RVLD  +G +FM +    HH                            ++T +AWDL HEQL+L D  G V+VWN Y E+LLL+ +VA+ ++  G R G A+  L G   S A        D ++Y +SP+                         W+      S                    L  ++ C     + D  T  +T   R                T+                            DGSD  A         S    V++ S+D T+ AW+  G +  +R                                            R  A  E+    +L  G VL  GT+ G V+FW L T        H NTVSA+AA  D   G I LA+  ++G +A+W   AKDG     +P ++  V  AHG  +                   D E+L LAFV     LL S GND  +RCW  R
Sbjct:  411 EHMPSYQVHATKRWERLHALGXXXXXXXXXXXXXXXTALAVVAEHGFLCSAGADGRARVLDLARGTSFMDL----HHPVRGRGXXXXXXXXXXXXXXXXXGARAGVYTGLAWDLRHEQLILCDGFGNVEVWNAYAETLLLRKRVARPLAPRGARAGDAVPGLSGVRVSAAGVRVSTAEDTVVYALSPAAXXXXXXXXXXXXXXXXXXXXRALHWRR-STTRSRXXXXXXXXXXXXXXXXXCRLTERRGCRRLGAHGDAVTAILTQQPRTXXXXXXXXXXXXXXATAADA-------------------------DGSDGAARGASAAQHCS----VMTVSLDSTVRAWDADGDARGWRSSASXXXXXXXXXXXXXXXXXXXWQRVQKRKSAXXXXXXXXXXXRAAADAELACACLLPVGRVLAAGTEAGDVQFWMLGTSTCTVHAAHANTVSAIAAGEDASCGDILLATGSYDGDLALWGLHAKDGPVANRLPKLEQRVAGAHGRRDASLSAAAAATPLSDAAALVDTEVLALAFVGR-AGLLASGGNDGAVRCWCAR 933          
BLAST of mRNA_P-littoralis_Contig130.102.1 vs. uniprot
Match: R1CYG8_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CYG8_EMIHU)

HSP 1 Score: 141 bits (356), Expect = 4.720e-31
Identity = 175/716 (24.44%), Postives = 276/716 (38.55%), Query Frame = 1
Query:  280 TLVTSSPHRGAVTCLIHTRPGTYSALAGPLVFSGSNDHTIKVWNAWASAPFKETCLQTIAEHRGGVTALAFA--------GDATLISTARDGSVRLWRPQRGRNLLRFPFFCCVKCLSLYPA-------------IGGGKSRSIGV---------------GQPRVFADV--WATAACIAGGDTWTLYCGDSDGTISVFQRAPASAAERLANARRKHSDSLAMEQLADNEVTLRRRWTHLHSLAITGLVLVSEHNFLLSMGNDGACRVLDYIQGNTFMTIENNDHHIFTSVAWDLAHEQLVLADDAGVVQVWNTYTESLLL--------------KTKVAKA---------VSSTGPRKGQALKALLGFHSSKADDMLYGMSPSEGCFFRWKMVKADGSTLIGRHDDSILGLDFQGAAALAGQQNCDGYLDRTTVDVTTAERQLDGEKLVVKQKNGGGTSVTKSSQKRVEQRFSAQDGHSSAGGVGRDDGSDKEATEDDGEDEVSFGLVVLSASMDGTISAWE---MLGKSEKYRMRQPAGVEVTSMLVLTGGSVLVTGTDDGSVRFWRLDTGAGESFKTHENTVSALAAYRDRQG-SITLASAGFEGSIAIWRARAKDGLKQKTIPTVDFSVHRAHGTTNGEDAEILCLAFVAADM-PLLISAGNDRLIRCWSFREHSCTLISILEGHKDSIEALVADGLFLLSGSYDGEVRVWN 2229
            T V       AVTC    RP    A    L  +G  +  + ++ +       ET  + +  H G V  L F         G   L+S + D +VR+W P         P   CV+ L  +               + G    ++ +                + +V  DV  W  A  +   +  TLY GD  G ISV++  PA  A RL+  R++                       +HSL +T L+LV     L+S   D   +VLD   G     I++     FT++ WD A  +L+L D++G + +W+   E  L                 KVA A         + STGPR G+   +  G       +    +S S      W++V    S     H  +++ +   G AA+     CD   +R +    + E  L                 T+SS+  V                                          SAS+DGTI AW+   M   S  + +R     E+  ++       LVTG DDG++R W +D+G+  +   H NTV+ L+   D +G S+ L S+ F+G++  W    +   + + +    F+ H         + E+L +   AA++ P  ++AG+   I+ WS   H+  L+  L GH + +  L  DG FLLSGS DG VR+W+
Sbjct:   13 TYVVEQDSSSAVTCHASHRPRRGGATE--LTAAGLANGAVALFTSRGEPSCAETKPRMLRGHSGLVCGLLFVSGPEVGGHGGYLLLSCSADRTVRVWDPASSE-----PEPACVQTLRGHGGTVTDLAITDTGMLVTGSTDSTVRIWRADPARTVMLHPWFSEVQVLRDVSGWINALALHSKEE-TLYVGDERGHISVYR--PAGGAMRLSRWRQQ---------------------PRVHSLGVTRLLLVPGERVLVSASYDCTAKVLDTRSGAVTRIIDSPHRSRFTALCWDGARSELLLGDESGHLSIWDVGGEGCLKCERLWGDGALPKQGGEKVAAALANAVRVSRIDSTGPRVGKPGPSQGGLRHLALAEGGRLLSSSGTAVDAWRVVHGISSVRAAAHSAAVVAVAGPGTAAV-----CDEGEERRSDAARSPEAALS----------------TRSSESAV-----------------------------------------YSASLDGTIRAWDPQDMSCTSIFHEVRS----EIACLIHCPRCERLVTGHDDGAIRLWHVDSGSTVTLSGHSNTVTCLSV--DTRGKSVRLLSSSFDGTVGAWDISGQRPPRLELL----FAAH---------EEEVLAVR--AAELTPRYVTAGSGAPIKIWSLDTHA--LLGQLRGHTEPVGHLAVDGHFLLSGSDDGSVRLWD 612          
BLAST of mRNA_P-littoralis_Contig130.102.1 vs. uniprot
Match: A0A225VLV2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VLV2_9STRA)

HSP 1 Score: 141 bits (356), Expect = 5.050e-31
Identity = 171/682 (25.07%), Postives = 290/682 (42.52%), Query Frame = 1
Query:  184 VFAGRSNGAVVLWRMVTRNLFGGANKNDRVEETLVTSSPHRGAVTCLIHTRPGTYSALAGP--LVFSGSNDHTIKVWNAWASA----PFKE--TCLQTIAEHRGGVTALAFAGDAT--LISTARDGSVRLWRPQRGRNLLRFPFFCCVKCLSLYPAIGGGKSRSIGVGQPRVFADVWATAACIAGGDTWTLYCGDSDGTISVFQRAPASAAERLANARRKHSDSLAMEQLADN-----EVTLRRRWTHLHSLAITGLVLVSEHNFLLSMGNDGACRVLDYIQGNTFMTIENNDHHIFTSVAWDLAHEQLVLADDAGVVQVWNTYTESLLLKTKVAKAVSSTGPRKGQALKALLGFHSSKADDMLYGMSPSEGCFFRWKMVKADGSTLIGRHDDSILGLDFQG-AAALAGQQNC-DGYLDRTTVDVTTAERQLD---GEKLVVKQKNGGGTSVTK----SSQKRVEQRFSAQDGHSS-AGGVGRDDGSDKEATEDDGEDEVSFGLVVLSASMDGTISAWEM----LGKSEKYR--MRQPAGVEVTSMLVLTGGSV-------LVTGTDDGSVRFWRLDTGAGE-SFKTHENTVSALAAYRDRQGSITLASAGFEGSIAIWRARAKDGLKQKTIPTVDFSVHR--AHGTTNGEDAEILCLAFVAADMPLLISAGNDRLIRCWSF 2106
            +F GR +GA++ W + +       + N        T   H G V  L       ++   GP  L+FSGS D TIK+W+ W +     P +   TC+QT+ EH G V  +         ++S + D +V+ W P  GR L+ +P++   + + L P    G S              W +  C+  G   TL+ GDS G ISV+  +  +  + ++N      DS+  +QL D      +  LRR+++H HSL ++ L +V+++ F++S+G D   +V+D I G    TI ++    F S  WD   + L+L D AG V +WN + + LL K    K + ST P    A+  +L F  +   D L  +  + G   +W   +  G      H DS+     Q  +A+L G   C D Y  + + +      ++      K   K   G    V K     + K +E  F + +  +  A G+ R+                    ++L+  +DG++S WE+    + ++  ++  +++    EVTS+   TG  +        + G   G +  W     A   SFK H + V  L  +        L S   +  + +W              T +  V R  +  +++G  + I+CL  VA    L++SA  D  +  W +
Sbjct:   78 IFGGRHDGAIMHWSISSIPSVTIPSAN--------TMRGHTGVVLSL------DFAPDLGPQGLLFSGSADRTIKIWDPWGTPDTPLPTRSSYTCVQTLTEHCGSVVCVRILTHQNHGIVSCSLDHTVKTWYPTEGRALMLYPWYMPAQSI-LQP----GSS--------------WPSVFCVRSGANGTLFVGDSAGGISVYTHSSDNTHDMVSNT---PLDSVDAKQLGDQLSMKFQFGLRRKFSHFHSLGVSTLQMVADNCFVVSLGFDEKAQVVDAISGALSSTICSSSGTRFISCTWDDRGQLLLLGDIAGYVHLWNMFEDKLLAK----KQLISTSPL---AVVGMLSFVGTTGGDFLL-IGQANGVK-QWFCNRNVGYVNCNGHSDSVSDKTSQFFSASLDGSIRCWDSYEMKVSFEFEEKGTEITCMVASKQFHKLFTGHDCGVVKVWSIHAGKLLELSFGSSNAVTCLAVGIVRNQ------------------EILLAGCIDGSVSMWEVNITGITRAVPFQPTLQKEKKEEVTSLAFCTGSFLSQEGQEFFIAGFFSGQIVMWNFAKKAVVCSFKAHNDAVCCLTLH-----GCFLFSGSDDTLLRMWNMF-------NPSETYELGVLRPPSSPSSSGSGSPIVCLD-VAPFRGLVLSAAADGTLIVWDY 683          
BLAST of mRNA_P-littoralis_Contig130.102.1 vs. uniprot
Match: G4YZT3_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZT3_PHYSP)

HSP 1 Score: 137 bits (345), Expect = 9.110e-30
Identity = 174/686 (25.36%), Postives = 276/686 (40.23%), Query Frame = 1
Query:  184 VFAGRSNGAVVLWRMVTRNLFGGANKNDRVEETLVTSSPHRGAVTCLIHTRPGTYSALAGP--LVFSGSNDHTIKVWNAWASA----PFKE--TCLQTIAEHRGGVTAL-AFAGDATLISTARDGSVRLWRPQRGRNLLRFPFFCCVKCLSLYPAIGGGKSRSIGVGQPRVFADVWATAACIAGGDTWTLYCGDSDGTISVFQRAPASAAERLANARRKHSDSLAMEQLADNEVTLRRRWTHLHSLAITGLVLVSEHNFLLSMGNDGACRVLDYIQGNTFMTIENNDHHIFTSVAWDLAHEQLVLADDAGVVQVWNTYTESLLLKTKVAKAVSSTGPRKGQALKALLGFHS----SKADDMLYGMSPSEGCFFRWKMVKADGSTLIGRHDDSILGLDFQG-AAALAGQQNC-DGYLDRTTVDVTTAERQLD---GEKLVVKQKNGGGTSVTKSSQKRVEQRFSA---QDGHSS--AGGVGRDDGSDKEATEDDGEDEVSFGLVVLSASMDGTISAWEMLGKSEKYRMRQPAGV-----------EVTSMLVLTGGSV-------LVTGTDDGSVRFWRL-DTGAGESFKTHENTVSALAAYRDRQGSITLASAGFEGSIAIWRARAKDGLKQKTIP-TVDFSV--HRAHGTTNGEDAEILCLAFVAADMPLLISAGNDRLIRCWSF 2106
            +F GR +GA++ W +         + N        T   H GAV  L       ++   GP  L+FSGS D +IK+W+ W  A    P K    C+QT+ EH G V  L        +IS + D +V+ W P  GR LL +P++   + +                 QP      W +A C+  G   TL+ GDS G IS                     D + M+     + +L+R+++H HSL I+ L +V++  F++S+G D   +++D I G    TI +     FTS AWD   + L+L D AG V +WN + + LL K K+  A+             ++G HS       D +L G++       +W   +  G    G H DSIL   FQ  +A+L G   C D Y  + +      + ++      K   K   G  + V K       +       ++G  +  A GV RD                    V+L+ S+DG +S WE    ++ +    P GV           E TS++  +G  +        V G   G +  W         SF+ H + V ++A +        L S   +  + +W            +P T +  V  H    +++G  + I+CL  V     L++SA  D  +  W +
Sbjct:   50 IFGGRHDGAIMHWPISQAPSVTIPSAN--------TLRGHTGAVLTL------DFAPELGPEGLLFSGSADRSIKIWDPWGGADSSLPTKGGYACVQTLTEHCGSVVCLRVLTRSHGIISCSLDRTVKTWYPAEGRALLLYPWYLPAQSIL----------------QP---GSCWPSAFCVRSGANGTLFIGDSGGGISQL------------------GDQVDMKF----QFSLKRKFSHFHSLGISKLEIVADSCFVVSLGFDEKAQIIDAISGALSSTICSASAARFTSCAWDDRGQILLLGDAAGYVHLWNIFEDKLLGKKKMVAAMPL----------GIVGMHSLTGIPAGDFLLTGLANGVK---QWICNRNVGYVSCGGHSDSILTKTFQFFSASLDGSIRCWDSYEMKASFGFEERDSEITCMVASKQFQKIFTGHDSGVVKVWSIHAGEMLELPMERNGSVTCLATGVVRDQ------------------EVLLAGSIDGCVSVWE--ANADGF----PRGVPFQPVLQLEKKEATSLVFCSGNFLAQDGQEFFVAGYSSGQIVMWSFAKKSVFCSFRAHSDAVCSMAVH-----GCFLFSGSDDTLLRMWN--------MCNLPETYELGVLRHPTSTSSSGSSSPIVCLD-VTPMRGLVLSAAADGTLIVWDY 629          
BLAST of mRNA_P-littoralis_Contig130.102.1 vs. uniprot
Match: A0A662WIJ9_9STRA (TrmE-type G domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIJ9_9STRA)

HSP 1 Score: 137 bits (344), Expect = 2.510e-29
Identity = 96/328 (29.27%), Postives = 163/328 (49.70%), Query Frame = 1
Query:  367 LVFSGSNDHTIKVWNAWASA----PFKET--CLQTIAEHRGGVTALAFAGDAT--LISTARDGSVRLWRPQRGRNLLRFPFFCCVKCLSLYPAIGGGKSRSIGVGQPRVFADVWATAACIAGGDTWTLYCGDSDGTISVFQRAPASAAERLANARRKHSDSLAMEQLADNEVTLRRRWTHLHSLAITGLVLVSEHNFLLSMGNDGACRVLDYIQGNTFMTIENNDHHIFTSVAWDLAHEQLVLADDAGVVQVWNTYTESLLLKTKVAKAVSSTGPRKGQALKALLGFHSSKADDMLYGMSPSEGCFFRWKMVKADGSTLIGRHDDSIL 1326
            L+F+GS D +IKVW+ W  A    P + +  C+QT+ EH G V  +         L+S + D +V+ W P  GR LL +P+F   + ++                QP      W +  C+  G + TL+ GDS G ISV+  + A++ +       +H + L  +  +  +  L+R+++H HSL I+ L LV+++ F++S+G D   +V+D I G   +TI N     FTS +WD   + L+L D  G VQVW+ + + L+ K K+  +     P     +  L+G  ++  D +L G++       +W + +  G      H D+I+
Sbjct:  245 LLFTGSADRSIKVWDPWGGAETPLPTRSSYSCVQTLIEHSGSVVCVQVMTQQKHGLVSCSLDHTVKTWYPAEGRALLLYPWFLPAQSIA----------------QPGTN---WPSTLCVRSGASDTLFVGDSGGCISVYTSS-ATSMDSDTMLDLQHDEPLGGQSDSRFQFRLKRKYSHFHSLGISSLQLVADNCFVVSLGFDEKAQVIDAISGVLSLTISNASGARFTSCSWDSPSQLLLLGDSTGFVQVWDIFEDKLVGKKKMVVSP----PLAIAGIYVLIG--AAAGDFLLTGLANG---MKQWLINRDVGYRNCSGHSDAIV 543          
BLAST of mRNA_P-littoralis_Contig130.102.1 vs. uniprot
Match: A0A8K1CN86_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CN86_PYTOL)

HSP 1 Score: 136 bits (342), Expect = 3.500e-29
Identity = 97/334 (29.04%), Postives = 154/334 (46.11%), Query Frame = 1
Query:  184 VFAGRSNGAVVLWRMVTRNLFGGANKNDRVEETLVTSSPHRGAVTCLIHTRPGTYSALAGPLVFSGSNDHTIKVWNAWASAPFKET---------CLQTIAEHRGGVTALAFAGDAT--LISTARDGSVRLWRPQRGRNLLRFPFFCCVKCLSLYPAIGGGKSRSIGVGQPRVFADVWATAACIAGGDTWTLYCGDSDGTISVFQRAPASAAERLANARRKHSDSLAMEQLADNE----VTLRRRWTHLHSLAITGLVLVSEHNFLLSMGNDGACRVLDYIQGNTFMTIENNDHHIFTSVAWDLAHEQLVLADDAGVVQVWNTYTESLLLKTKV 1140
            VF GR +G ++ W++  R      N +            H GAV  L  T+    S     L+FSGS D TIKVW+ W  +  ++          C+QTI  H+  VTAL          IS + D ++++W P  GR LL +P+F  V+ +SL                    +  W T+ C+    + +L+ GDS G++S +    +       + +  ++   A+E L D        L+R+ T  HSL +  L L++E++F++S+G D   +VLD        TI N +   FTS AWD   + L LAD  G V +W+ + +  + K K+
Sbjct:   88 VFGGRHDGTILHWKIQQRCSITPLNASHLYG--------HSGAVLALEFTQ----STGKDGLLFSGSADRTIKVWDPWRGSEAEQQLHGKRHDHFCVQTITAHQASVTALKLLTQNRNGFISCSLDQTIKIWHPSEGRGLLLYPWFTLVQSISLT-------------------SGHWPTSLCVRDAASCSLFVGDSSGSVSHYTNGVSF---ETMDDQPDYNGKSALESLHDTSPRDLFKLKRKHTQFHSLGVVQLQLIAENSFVVSLGFDQTAQVLDPTTSVISSTIRNRNPVRFTSCAWDSKAQLLFLADALGYVHLWDIFQDKWIKKEKL 387          
BLAST of mRNA_P-littoralis_Contig130.102.1 vs. uniprot
Match: A0A6G0RZU9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RZU9_9STRA)

HSP 1 Score: 132 bits (332), Expect = 4.860e-28
Identity = 101/327 (30.89%), Postives = 157/327 (48.01%), Query Frame = 1
Query:  184 VFAGRSNGAVVLWRMVTRNLFGGANKNDRVEETLV-TSSPHRGAVTCLIHTRPGTYSALAGP--LVFSGSNDHTIKVWNAW----ASAPFKE--TCLQTIAEHRGGVTALAFAGDAT--LISTARDGSVRLWRPQRGRNLLRFPFFCCVKCLSLYPAIGGGKSRSIGVGQPRVFADVWATAACIAGGDTWTLYCGDSDGTISVFQRA-PASAAERLANARRKHSDSLAMEQL-ADNEVTLRRRWTHLHSLAITGLVLVSEHNFLLSMGNDGACRVLDYIQGNTFMTIENNDHHIFTSVAWDLAHEQLVLADDAGVVQVWNTYTESLL 1125
            +F GR +GA++ W +         ++   V    V T   H GAV  L       ++   GP  L+FSGS D +IKVW+ W    +S P K    C+QT+ EH G V  L         +IS + D +V+ W P  GR LL +P++   + +S                QP      W +A C+  G   TL+ GDS G ISV+  + P+       NA     D    +Q+   ++ +L+R+++H HSL I+ L +V+++ F++S+G D   +++D I G    TI +     F S  WD   + L+L D AG V +WN + +  L
Sbjct:   80 IFGGRHDGAIMHWPI---------SQTPSVTSPCVNTLRGHTGAVLTL------DFAPDLGPEGLLFSGSADRSIKVWDPWGGTDSSLPTKGGYACVQTLTEHCGSVVCLRVLTHQNHGIISCSLDRTVKTWYPAEGRALLLYPWYLPAQSIS----------------QP---GSSWPSAFCVRSGANGTLFVGDSGGGISVYTHSSPSDDTIVPDNALEVVEDKRLGDQVYTKSQFSLKRKFSHFHSLGISKLQVVADNCFVVSLGFDEKAQIIDAISGALSSTICSASAARFNSCTWDSRGQILLLGDAAGYVHLWNIFEDKFL 372          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig130.102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC79_ECTSI0.000e+068.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSR9_9PHAE4.640e-8843.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P4YF63_9STRA6.190e-3325.55WD40 repeat-like protein (Fragment) n=1 Tax=Phytop... [more]
A0A835ZBD8_9STRA1.890e-3125.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
R1CYG8_EMIHU4.720e-3124.44Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A225VLV2_9STRA5.050e-3125.07Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
G4YZT3_PHYSP9.110e-3025.36Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A662WIJ9_9STRA2.510e-2929.27TrmE-type G domain-containing protein n=2 Tax=Noth... [more]
A0A8K1CN86_PYTOL3.500e-2929.04Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0RZU9_9STRA4.860e-2830.89Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig130contigP-littoralis_Contig130:430708..437719 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LC79
PFAMsDUF3337,WD40
Model size2712
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0032182,GO:0043130,GO:0044424,GO:0044464
Exons13
Evalue0.0
EggNOG OGsKOG0308@1|root,KOG0308@2759|Eukaryota
Descriptionregulation of protein monoubiquitination
Cds size2712
COG categoryT
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig130.102.1prot_P-littoralis_Contig130.102.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig130 430708..437719 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789592.5144598-CDS-P-littoralis_Contig130:430707..4309051680789592.5144598-CDS-P-littoralis_Contig130:430707..430905Pylaiella littoralis U1_48CDSP-littoralis_Contig130 430708..430905 +
1680789592.529109-CDS-P-littoralis_Contig130:431331..4315351680789592.529109-CDS-P-littoralis_Contig130:431331..431535Pylaiella littoralis U1_48CDSP-littoralis_Contig130 431332..431535 +
1680789592.5421078-CDS-P-littoralis_Contig130:432031..4322781680789592.5421078-CDS-P-littoralis_Contig130:432031..432278Pylaiella littoralis U1_48CDSP-littoralis_Contig130 432032..432278 +
1680789592.5505195-CDS-P-littoralis_Contig130:432574..4327641680789592.5505195-CDS-P-littoralis_Contig130:432574..432764Pylaiella littoralis U1_48CDSP-littoralis_Contig130 432575..432764 +
1680789592.5586905-CDS-P-littoralis_Contig130:433045..4331901680789592.5586905-CDS-P-littoralis_Contig130:433045..433190Pylaiella littoralis U1_48CDSP-littoralis_Contig130 433046..433190 +
1680789592.5669286-CDS-P-littoralis_Contig130:433407..4335421680789592.5669286-CDS-P-littoralis_Contig130:433407..433542Pylaiella littoralis U1_48CDSP-littoralis_Contig130 433408..433542 +
1680789592.5764258-CDS-P-littoralis_Contig130:433878..4340341680789592.5764258-CDS-P-littoralis_Contig130:433878..434034Pylaiella littoralis U1_48CDSP-littoralis_Contig130 433879..434034 +
1680789592.5871437-CDS-P-littoralis_Contig130:434457..4349441680789592.5871437-CDS-P-littoralis_Contig130:434457..434944Pylaiella littoralis U1_48CDSP-littoralis_Contig130 434458..434944 +
1680789592.6026034-CDS-P-littoralis_Contig130:435131..4353281680789592.6026034-CDS-P-littoralis_Contig130:435131..435328Pylaiella littoralis U1_48CDSP-littoralis_Contig130 435132..435328 +
1680789592.6117327-CDS-P-littoralis_Contig130:435812..4359951680789592.6117327-CDS-P-littoralis_Contig130:435812..435995Pylaiella littoralis U1_48CDSP-littoralis_Contig130 435813..435995 +
1680789592.6272144-CDS-P-littoralis_Contig130:436142..4362511680789592.6272144-CDS-P-littoralis_Contig130:436142..436251Pylaiella littoralis U1_48CDSP-littoralis_Contig130 436143..436251 +
1680789592.6365626-CDS-P-littoralis_Contig130:436676..4369441680789592.6365626-CDS-P-littoralis_Contig130:436676..436944Pylaiella littoralis U1_48CDSP-littoralis_Contig130 436677..436944 +
1680789592.6472592-CDS-P-littoralis_Contig130:437526..4377191680789592.6472592-CDS-P-littoralis_Contig130:437526..437719Pylaiella littoralis U1_48CDSP-littoralis_Contig130 437527..437719 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig130.102.1

>prot_P-littoralis_Contig130.102.1 ID=prot_P-littoralis_Contig130.102.1|Name=mRNA_P-littoralis_Contig130.102.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=904bp
MHLEIVEVLALAGEGAGSQHWSRNAAQPRYSLSGDDAKESSCIHSFTCFD
VAERVEADHDVVFAGRSNGAVVLWRMVTRNLFGGANKNDRVEETLVTSSP
HRGAVTCLIHTRPGTYSALAGPLVFSGSNDHTIKVWNAWASAPFKETCLQ
TIAEHRGGVTALAFAGDATLISTARDGSVRLWRPQRGRNLLRFPFFCCVK
CLSLYPAIGGGKSRSIGVGQPRVFADVWATAACIAGGDTWTLYCGDSDGT
ISVFQRAPASAAERLANARRKHSDSLAMEQLADNEVTLRRRWTHLHSLAI
TGLVLVSEHNFLLSMGNDGACRVLDYIQGNTFMTIENNDHHIFTSVAWDL
AHEQLVLADDAGVVQVWNTYTESLLLKTKVAKAVSSTGPRKGQALKALLG
FHSSKADDMLYGMSPSEGCFFRWKMVKADGSTLIGRHDDSILGLDFQGAA
ALAGQQNCDGYLDRTTVDVTTAERQLDGEKLVVKQKNGGGTSVTKSSQKR
VEQRFSAQDGHSSAGGVGRDDGSDKEATEDDGEDEVSFGLVVLSASMDGT
ISAWEMLGKSEKYRMRQPAGVEVTSMLVLTGGSVLVTGTDDGSVRFWRLD
TGAGESFKTHENTVSALAAYRDRQGSITLASAGFEGSIAIWRARAKDGLK
QKTIPTVDFSVHRAHGTTNGEDAEILCLAFVAADMPLLISAGNDRLIRCW
SFREHSCTLISILEGHKDSIEALVADGLFLLSGSYDGEVRVWNFSSVEQK
DKSNIGMSTSSRDEVGETDATAALGVIKAHPNGVAGMAIMASSRKSCANF
VEGREKGEDAGGFLVTCGNTEGVVRIWDYTHVCDGSTCGRLVAEVRSHDE
ALFTCVACTQDPSGEPLLFAGTNKGSILQLAFDSIEDDGINGDREESRRV
VFS*
back to top

mRNA from alignment at P-littoralis_Contig130:430708..437719+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig130.102.1 ID=mRNA_P-littoralis_Contig130.102.1|Name=mRNA_P-littoralis_Contig130.102.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7012bp|location=Sequence derived from alignment at P-littoralis_Contig130:430708..437719+ (Pylaiella littoralis U1_48)
ATGCATCTGGAAATAGTTGAAGTTTTAGCATTGGCAGGTGAAGGGGCTGG CAGCCAGCATTGGTCCCGAAATGCTGCTCAACCTCGATACTCGCTGAGTG GGGATGACGCCAAGGAGTCGAGCTGTATCCACTCCTTCACCTGTTTTGAC GTCGCGGAGCGAGTGGAGGCGGATCATGATGTTGTGTTCGCGGGACGGGT GCGTTGATGTTACAGCTGTAGTTCTGTCTCTCGTGCCCTACAGCATGTGG TGTGTAAAATAAACTACCTACCAAATATTTCCGTCTGCTTTACAGCAGTG CGATATCCTATTTGATACCTGGTACAAGGTGTTGTTGGTGAAAGGGACTC GTGCTTGACACCCACATACATGCTGCCGTGATAGGTGTATGGTGTCAAGA AACGTACTCGTCACTTTGATAGCATATTCGTAGTTTAATTATCTTCCAGG TCAAGATTGCATCCACAGCAGTACTGTAGAGCAGTATAGCGATCAACTTT CCGCCCGTACCGCGCAAACCTACGGTACATCGTGCACCTCACGGACGAAT CGCATTTCCGTGTGCTAAGTGACATACTTGTATTACTTGCTGGCGTCCAT CACCCTGCAACTTCATTAATACAGAGTAATGGGGCAGTTGTGCTCTGGCG GATGGTCACACGTAACTTGTTTGGCGGGGCGAACAAAAACGACCGCGTGG AGGAGACTCTTGTGACATCCTCGCCGCATCGAGGTGCCGTCACCTGCCTG ATACATACCCGTCCCGGCACTTACAGCGCCTTGGCGGGGCCATTAGTTTT CAGTGGATCGAACGATCATACGATCAAGGTGGGTATCGTTCACACTAAAC CTGCCTGCCAAAGCCAATACACGGTGTCTCCAGTGCGTTTAGTGGCTGAC TGAGTAAGAATTGGCCTCTAAACCAAGCTTCCAATGCGTGTACCCCGGAG TGCGTCACGGTAGTTTTGCACGCCCCGAGTGTAGCGATTAGCGTTGAGGT CCTGCAGTGGCCAGGTGATGAAATCGATGCCGGCATCTCCGCGGTTGTCC TTTTTCTGACAACAGCGTGTGTAATCATCTTGTTACGTGGATTTGACGCA AGTCGGCGAACAACGGGAGAATCGAGACCCCGGCGTGCGACAAGGAAGAC ATTGGAGTGGGTGAGGCAGAGAGGGGCCCTGCCGTTACCCGAGTCGGAAT TTGAATGTTTGGCCGATGTCCGGAGAGCAGACTGAATAAATAAAATTATT TTCGTCGACAACAAATTAATGTCCCTCTACGTCTGCCTCATTTCGACCCA TCTTCTTCATGCCGTACAAGGAAGGTGTGGAACGCATGGGCTAGTGCTCC GTTCAAAGAAACCTGCCTTCAGACCATAGCAGAGCACAGGGGAGGAGTGA CGGCCCTAGCCTTCGCCGGGGATGCAACACTCATCTCTACCGCGAGGGAC GGGAGCGTGCGATTATGGCGACCACAGCGAGGTCGAAACCTCTTGCGGTT CCCCTTCTTCTGTTGCGTCAAGTGCCTATCGTTGTATCCTGCCATAGGAG GGGGAAAGTCGAGGTCAATCGGTAAGGAGGGTAGGGATCTCGTAGAACCA TTATTGAGGGCGTCCACCACATAGCAGGTTTCAACGATTTTCCCCTTTCG CAACAATGTTTGTCGCGCACCCAACAATATCAGCGAAAGTACTGGCAGTC TTCCATCAGTAGGTTCAAAAACGTAGGGCATGCTTCGTACAAACGGTCAT CGGTGGATAGTTGGACGAATAGGCAGAAGTTGGATGAGATACGTGTGCAA TTTTCGCATCTCGCGCCGTTCAAACCTCCGGTTTTGCATGAACCGCTTTC CAATGTTTGTTGTTCAGGAGTAGGGCAACCTAGGGTTTTTGCAGACGTGT GGGCAACGGCAGCGTGTATTGCAGGTGGGGATACGTGGACTTTATACTGC GGTGACAGCGACGGAACGATTTCTGTTTTCCAACGAGCTCCCGCTTCTGC GGCGGAGCGGTTGGCCAACGCCAGAAGAAAACATTCGGACAGTCTTGCCA TGGAACAGTGAGTGGGAAGCAGACAATCATTCGGCCTTCTCCTGGGCCCT GTTGCAAAGAACGTGGTTGAAAAAGGTGGTAGATCCCCCAGCGTTGACAG CTTGGCGCAGGTTTGACCAACGTGCACGTCGAAGGCTTGTGAGAGAAAAC TCCTCCGGCTGCAACTGGACTCGGGAATGGTAAAAGTATCAAACGCTCTG CTCCGTTGCTGATACAGGCTGCGAAGGGCAACCACATTTTCTACCACCAT ATGCGTTTTCGGGCGGATTGATTGTTTGCTTCCTGCAGATTGGCGGATAA CGAGGTGACTCTTCGCAGAAGATGGACCCACCTGCATAGCCTTGCTATCA CGGGTCTCGTGCTCGTGTCAGAGCACAATTTTCTTCTCAGCATGGGCAAC GACGGGGCATGCCGAGTTCTTGATTACATCCAGGTATTAACGCACACTGA TGTTGTATGATAGCTGCCACGAATACAGATGCTAATCTGCTGTTTCCGCC TGCTCTTGTAGTAGTCTGACATGCTGTTGTGCAGCACCTGCATCTCAAGT CTTACACAGGGCTTCCTGTCGTCGTTCGGCCATGGCCCACGTACACCCGA CCGACGTTGTTGCGTCGTTTGTACTTGCTAAACACGCGCTCGCATGACAG GGCAATACCTTCATGACGATTGAAAACAACGATCACCACATTTTCACTTC CGTTGCGTGGGACCTCGCCCACGAGCAGCTTGTGCTAGCGGACGACGCGG GTGTGGTGCAAGTTTGGAACACCTACACAGAATCGGTGCGTGACTGACTC CTGCCGCCGTCTTTTATGACGCAAGCCAGTCACCACTTTGTGCGGGGCTA CGATAGGAGCGTTTCGTGACGACATTTGAACATTGAATAGCGCTTTTCGG TACCAAGTGCCTTGTTTTTGTATCTCGGCTCACTTTCAAGAGGAAAGCCG CTTGGTACAAGTGTACATTGGAACAATTTCCGAGTGCAGGGCGAATTCGT AGAACAGATATGCGAAATCTGCCGTGTATTGGTACATCATTCAACGATTG CAATTGAATCACTTCGACATCGAGCGGCTTTTCCGTTTCTACTGATCTCT AGCTTGGTGCTCGCCGCGCAGCTTCTTTTAAAAACGAAAGTGGCGAAGGC AGTCTCCTCCACAGGCCCTCGCAAAGGCCAGGCCCTAAAGGCGCTGCTCG GGTTCCATTCCTCGAAGGCGGACGACATGCTGTACGGCATGTCCCCTTCA GAGGGCTGCTTCTTCCGGTGGAAAATGGTGCGCGAACGTTGCGTTGCGGT CGTCAGACAGACTTGTTAGGCGTCGTCGAGTCTTTCTATTGTTTCATTAG CGGACATGGCTTCCATGTACTGCATGCAGACTGTGGGCGGTATTTAGAGA GCCTCTTGAGTTGAGCGCCTCACTTTCTCGGCGGAGCACTTCCTGCTCCA ACTTAAAACGCAAAAGGGGTTTGTCTGCAGAAGTACTGACTGCGGTGCGT GCGATCCACCAGCAAACGTTAAGGTATACCATGCGATGAGCGAATATACG TGAGGCCTCCCTCTCACTTAAGCAGTGCGACTAGTACCAGTTGCACCGCA AGTGTTGTTCTTGAGTGCACTGAGCCCGAACGAAAGTACGCAGTCTTTGA TGTTCCCCAACCATAAACATCTATGGGCCCTATTATTCGATCGACCCAAG GTCAAGGCCGATGGCAGCACCTTAATCGGGCGCCACGACGACAGCATACT AGGCCTGGATTTTCAGGGAGCAGCGGCGCTCGCCGGGCAACAAAATTGCG ATGGCTATCTCGATAGGACGACTGTTGACGTCACTACGGCAGAGCGCCAG CTCGACGGCGAGAAGCTGGTTGTTAAACAGAAAAACGGTGGTGGTACTTC CGTGACAAAGTCGAGTCAAAAGCGCGTCGAACAAAGATTTTCAGCTCAGG ATGGTCACAGCAGTGCGGGTGGAGTAGGGAGGGACGACGGGAGTGACAAG GAGGCAACGGAGGATGACGGGGAAGATGAGGTCAGCTTTGGATTGGTAGT GTTGTCAGCCAGCATGGATGGTACCATTAGCGCCTGGGAGATGCTTGGAA AGAGCGAGAAGTACCGCATGCGGCAACCAGCGGGCGTGGAGGTGACGAGC ATGCTCGTACTAACGGGAGGGTCCGTCCTGGTTACTGGTGAGTCTACGCT AGAACGGCAGTTACTTGCACGCGTATCTGAAGCTCTGTGGTGGCTTAAAA ACCCTCGACTGATTCCATGCGCGTACTTCTAGAACAATGAACATTTTTCG CGTGGAGTAAGAAGCCCAAGCCATCGCATCGTCTGGGACGCCCGATGTTT GTTGGATTTTTCCCTTTTTTTTAGGGACCGACGATGGCAGCGTGAGGTTT TGGCGGCTAGACACGGGAGCAGGGGAATCATTTAAAACCCACGAGAACAC CGTTAGCGCTCTCGCGGCGTACAGGGATCGACAGGGGTCGATAACCCTCG CCAGTGCGGGCTTCGAAGGATCGATCGCGATATGGAGGGCACGTGCCAAG GATGGCTTGAAACAAAAGACAGTGAGAAAAACCGACTGCCAACCTATGTG ATAGGCTTTACTCAAAGTTTGGTGCGCTCGGAGGTTTGTAGTGTACGTCA AGTGAATTTATGCCGTTTTCTAGGTACGAACATGTGACTTATTTTCGTTC CTCGATTTCTACACAGTTGTGAGAAAGATGTGATTCGCGTTGAACGATGT CATAAGGCTCTTTGATGCTCACAATCGGGGGTGCGTGGAACTCCTCCGCT TCGAGAGTTGGACATGCGAACGATACACTTTTTCCTTCGGATCGATTTCT CCACACACTAAAGCATGAATTTTCGATCCACATTTACTCGATTCTTCGAG TCTTTCCATTACATGGTTTTTCGATCCGAATTACTGGGTTCTCAGCGTCA TTCGACATATCCCAAGCAACGAATACTTCAGTCGACCTGCCTGTGGCCAT AATGATCCCCTGCTTCGCCTGGATCGCTTTCTTGCAAAACCATTGCTTTT GACAGATTCCAACTGTAGATTTCTCCGTTCATCGCGCCCATGGCACCACA AATGGAGAAGACGCCGAAATTCTTTGCCTGGCGTTCGTGGCGGCGGATAT GCCGTTGTTGATCAGCGCAGGCAACGACCGGTTGATACGATGCTGGAGCT TCCGGGAGCACAGTTGTACATTAATTTCAATACTAGAGGTGAGCACACAC CTGTGACAAGTGACCCTTACTGCTTGCACTCTTCCTGCGAAAAGAAACGT CGTCCTGAGATTGTGCGGTAGTGAACACCTCCACTTTGAGATTATTGTCA ATGCTCTCCTGCCTCCTGTTTCATCTGTTTTCCAGGGCCACAAAGACTCG ATCGAGGCGCTAGTTGCGGATGGGCTGTTCCTTCTCAGTGGGAGTTATGA TGGAGAGGTTCGAGTGTGGAACTTTTCAAGTGTTGAGCAGAAAGGTACGT TGGAGTTTAAAGTGTATTGATACGTTGACAAGGGCTTTTAAGACTACTCC CAAACCTGGAACCAGATTCTGGCCATCGGTGCTCGGGTGCCCTTGCCACG CTCAGCGGCAATTGTGGTAGTCACCCGATGACATGTACCACTTTTTTGCT TTTGACAGAATATTTTATCGCCCGGGACTCCCGTTCCGTGTTCGACAAAA TTCGTGCGGCATCATGTTGCCCAAGTCGTTTATCAAACCACAGCTAAAAA GCCTTTCACTGCAGTGGTGAGCCTACCCCCTCCAAAAATGAATCAATGGA GTTGGGTATTTATAGCAGTCAAAACGCCCATTTCGTGCCGGTTGACACTC AGGCACATAATTTCCCCACGTCTTAATATGTACTTTTGCTATCCACGCAT GCATCCCTTTGAACACCAGACAAAAGTAATATCGGAATGAGCACTAGCTC CCGTGACGAAGTCGGCGAAACAGATGCCACGGCAGCACTAGGGGTGATCA AAGCGCACCCGAACGGGGTCGCCGGTATGGCCATCATGGCCAGCTCGCGA AAGAGCTGTGCCAACTTCGTCGAAGGCAGAGAAAAAGGAGAGGACGCGGG GGGTTTTCTCGTAACTTGCGGAAATACGGAGGGCGTCGTCAGGATATGGG ACTACACCCATGTGTGCGACGGTAGTACGTGTGGTAGGTAAGAAGACTTT GGATTGGAACACATTTTATTTTTGGATGTGTTGATAACACCTTGGTCAAT GGTCCTGTTTCTCATGACCGTGCTTACGGTCGCCACGCCACGCATACAGC CCTTCAGATGTCCGATCCGAGGGTACCCACGAAACTCTCGGTGACTTTAA TGGGCGATTACTTTCCCACTTTGCTTGGTCACGTCAGAGTGTTTGGGTGT ATGACATGATATGTGTGCATGTATCTTAGGGTATATCTGAATTTTATGTC CACGAAGACACACAGTCAAGAAGCTCCTTCAGCGGCAATTTATCTAGAAC AGAGAGACACCGAAATCTGGCCTTGCCGACATCGTCAGCAAGATGTTGCG GGGGTCGTCACTACAGTAAGTCAGCAGTATCCACAGACGAAATTCACTAC CAAACTTTTATGTTGTTGTTGTCTTCACATTAAAAACCTTTCCGATCTCT CCTCAGTACCTTCTAATGTCCGTACTCCACCGATCAGGTATGTTGTCCGA AATAAATAATCTATCTCCGCACACTTATATAATTCGTCGTGAATCGCTGA CAACGTTCTCTTGTGGCAGGCTTGTCGCCGAGGTCCGTTCTCACGACGAG GCGCTCTTCACCTGCGTTGCTTGCACTCAAGACCCGTCAGGGGAGCCCCT TTTGTTCGCCGGCACCAACAAGGGCAGCATACTCCAGCTAGCTTTTGATA GCATTGAGGACGACGGAATAAACGGGGATCGCGAGGAGAGTAGGAGGGTA GTTTTTTCCTAA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig130:430708..437719+

>mRNA_P-littoralis_Contig130.102.1 ID=mRNA_P-littoralis_Contig130.102.1|Name=mRNA_P-littoralis_Contig130.102.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2712bp|location=Sequence derived from alignment at P-littoralis_Contig130:430708..437719+ (Pylaiella littoralis U1_48)
ATGCATCTGGAAATAGTTGAAGTTTTAGCATTGGCAGGTGAAGGGGCTGG
CAGCCAGCATTGGTCCCGAAATGCTGCTCAACCTCGATACTCGCTGAGTG
GGGATGACGCCAAGGAGTCGAGCTGTATCCACTCCTTCACCTGTTTTGAC
GTCGCGGAGCGAGTGGAGGCGGATCATGATGTTGTGTTCGCGGGACGGAG
TAATGGGGCAGTTGTGCTCTGGCGGATGGTCACACGTAACTTGTTTGGCG
GGGCGAACAAAAACGACCGCGTGGAGGAGACTCTTGTGACATCCTCGCCG
CATCGAGGTGCCGTCACCTGCCTGATACATACCCGTCCCGGCACTTACAG
CGCCTTGGCGGGGCCATTAGTTTTCAGTGGATCGAACGATCATACGATCA
AGGTGTGGAACGCATGGGCTAGTGCTCCGTTCAAAGAAACCTGCCTTCAG
ACCATAGCAGAGCACAGGGGAGGAGTGACGGCCCTAGCCTTCGCCGGGGA
TGCAACACTCATCTCTACCGCGAGGGACGGGAGCGTGCGATTATGGCGAC
CACAGCGAGGTCGAAACCTCTTGCGGTTCCCCTTCTTCTGTTGCGTCAAG
TGCCTATCGTTGTATCCTGCCATAGGAGGGGGAAAGTCGAGGTCAATCGG
AGTAGGGCAACCTAGGGTTTTTGCAGACGTGTGGGCAACGGCAGCGTGTA
TTGCAGGTGGGGATACGTGGACTTTATACTGCGGTGACAGCGACGGAACG
ATTTCTGTTTTCCAACGAGCTCCCGCTTCTGCGGCGGAGCGGTTGGCCAA
CGCCAGAAGAAAACATTCGGACAGTCTTGCCATGGAACAATTGGCGGATA
ACGAGGTGACTCTTCGCAGAAGATGGACCCACCTGCATAGCCTTGCTATC
ACGGGTCTCGTGCTCGTGTCAGAGCACAATTTTCTTCTCAGCATGGGCAA
CGACGGGGCATGCCGAGTTCTTGATTACATCCAGGGCAATACCTTCATGA
CGATTGAAAACAACGATCACCACATTTTCACTTCCGTTGCGTGGGACCTC
GCCCACGAGCAGCTTGTGCTAGCGGACGACGCGGGTGTGGTGCAAGTTTG
GAACACCTACACAGAATCGCTTCTTTTAAAAACGAAAGTGGCGAAGGCAG
TCTCCTCCACAGGCCCTCGCAAAGGCCAGGCCCTAAAGGCGCTGCTCGGG
TTCCATTCCTCGAAGGCGGACGACATGCTGTACGGCATGTCCCCTTCAGA
GGGCTGCTTCTTCCGGTGGAAAATGGTCAAGGCCGATGGCAGCACCTTAA
TCGGGCGCCACGACGACAGCATACTAGGCCTGGATTTTCAGGGAGCAGCG
GCGCTCGCCGGGCAACAAAATTGCGATGGCTATCTCGATAGGACGACTGT
TGACGTCACTACGGCAGAGCGCCAGCTCGACGGCGAGAAGCTGGTTGTTA
AACAGAAAAACGGTGGTGGTACTTCCGTGACAAAGTCGAGTCAAAAGCGC
GTCGAACAAAGATTTTCAGCTCAGGATGGTCACAGCAGTGCGGGTGGAGT
AGGGAGGGACGACGGGAGTGACAAGGAGGCAACGGAGGATGACGGGGAAG
ATGAGGTCAGCTTTGGATTGGTAGTGTTGTCAGCCAGCATGGATGGTACC
ATTAGCGCCTGGGAGATGCTTGGAAAGAGCGAGAAGTACCGCATGCGGCA
ACCAGCGGGCGTGGAGGTGACGAGCATGCTCGTACTAACGGGAGGGTCCG
TCCTGGTTACTGGGACCGACGATGGCAGCGTGAGGTTTTGGCGGCTAGAC
ACGGGAGCAGGGGAATCATTTAAAACCCACGAGAACACCGTTAGCGCTCT
CGCGGCGTACAGGGATCGACAGGGGTCGATAACCCTCGCCAGTGCGGGCT
TCGAAGGATCGATCGCGATATGGAGGGCACGTGCCAAGGATGGCTTGAAA
CAAAAGACAATTCCAACTGTAGATTTCTCCGTTCATCGCGCCCATGGCAC
CACAAATGGAGAAGACGCCGAAATTCTTTGCCTGGCGTTCGTGGCGGCGG
ATATGCCGTTGTTGATCAGCGCAGGCAACGACCGGTTGATACGATGCTGG
AGCTTCCGGGAGCACAGTTGTACATTAATTTCAATACTAGAGGGCCACAA
AGACTCGATCGAGGCGCTAGTTGCGGATGGGCTGTTCCTTCTCAGTGGGA
GTTATGATGGAGAGGTTCGAGTGTGGAACTTTTCAAGTGTTGAGCAGAAA
GACAAAAGTAATATCGGAATGAGCACTAGCTCCCGTGACGAAGTCGGCGA
AACAGATGCCACGGCAGCACTAGGGGTGATCAAAGCGCACCCGAACGGGG
TCGCCGGTATGGCCATCATGGCCAGCTCGCGAAAGAGCTGTGCCAACTTC
GTCGAAGGCAGAGAAAAAGGAGAGGACGCGGGGGGTTTTCTCGTAACTTG
CGGAAATACGGAGGGCGTCGTCAGGATATGGGACTACACCCATGTGTGCG
ACGGTAGTACGTGTGGTAGGCTTGTCGCCGAGGTCCGTTCTCACGACGAG
GCGCTCTTCACCTGCGTTGCTTGCACTCAAGACCCGTCAGGGGAGCCCCT
TTTGTTCGCCGGCACCAACAAGGGCAGCATACTCCAGCTAGCTTTTGATA
GCATTGAGGACGACGGAATAAACGGGGATCGCGAGGAGAGTAGGAGGGTA
GTTTTTTCCTAA
back to top