mRNA_P-littoralis_Contig130.98.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig130.98.3 vs. uniprot
Match: D8LC78_ECTSI (Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC78_ECTSI) HSP 1 Score: 556 bits (1434), Expect = 1.050e-183 Identity = 272/375 (72.53%), Postives = 312/375 (83.20%), Query Frame = 2
Query: 101 MFWDWFRVCFSGAPNPSSSAKH-RYDEFEEERATTIHAENKPVDVDFEVGAVLGSGGFGLVKDGMHRKTLSKCALKFVYRANLSKKDEELFLMEAGILTGLTHGHVVEMRGFYRWDQAYCLAMEKMEGGELCEDILRRVFYSEACARRIILQVLDALAFLHRRGICHRDVKPENLLLHRRGGDHVKLADFGFATVLSWPEYKVVEPVGSPGYAAPELLRVLPYDGQVDMFSLGVVSFVLLSGILPFGGTAGNIAEVVEDTLRCDPPFDGIQWSAISGGGKDFVKALLSPKPGERPTAKSATFHPWMKVNGRALLSHSLSDRRSGEPKPLLQEYQSLQRKRLKAAVGAVLAANRLHKLLLAGRQDRRDKAVSYDGD 1222
M WDW RVC G NP +SA+ RY+++E++RATT+ + V VD+ VG +LG+GGFGLVK+G+HR+T SK ALKFV+R LSK DEELFLMEAGILTGLTH HVVEMRGFY+W+QAYCLAME+MEGGELCEDI+RRVFYSEACARRIILQVLDALAFLHRRGI HRD+KPENLLL RRG ++VKLADFGFA VLS P YKVVEPVGSPGYAA E+LRV+PYDGQ D+FSLGV+SFVLLSG LPFGG G + E V TL +PPFD +QWSA+S +DFV+ALLSP P +RPTA+ A FHPWMKV G LLS SLSDRR GE KPLL+E+Q LQR+RLKAAVGAVLAANRLHK L AG +DR D+A S GD
Sbjct: 1 MLWDWLRVCLGGYRNPDASAERCRYEDYEKDRATTVIVTHAAVHVDYAVGGLLGTGGFGLVKEGLHRQTQSKSALKFVFRKGLSKNDEELFLMEAGILTGLTHAHVVEMRGFYKWEQAYCLAMERMEGGELCEDIVRRVFYSEACARRIILQVLDALAFLHRRGIIHRDLKPENLLLVRRGSEYVKLADFGFAAVLSQPTYKVVEPVGSPGYAAAEVLRVMPYDGQADVFSLGVISFVLLSGYLPFGGVEGTLTETVNATLEGNPPFDEVQWSAVSDAARDFVEALLSPSPSDRPTAEKAMFHPWMKVQGNTLLSRSLSDRRFGENKPLLEEFQGLQRRRLKAAVGAVLAANRLHKFLAAGHEDRGDEAASRHGD 375
BLAST of mRNA_P-littoralis_Contig130.98.3 vs. uniprot
Match: A0A6H5KWP3_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWP3_9PHAE) HSP 1 Score: 514 bits (1323), Expect = 2.970e-167 Identity = 254/358 (70.95%), Postives = 295/358 (82.40%), Query Frame = 2
Query: 167 RYDEFEEERATTIHAENKPVDVDFEVGAVLGSGGFGLVKDGMHRKTLSKCALKFVYRANLSKKDEELFLMEAGILTGLTHGHVVEMRGFYRWDQAYCLAMEKMEGGELCEDILRRVFYSEACARRIILQVLDALAFLHRRGICHRDVKPENLLLHRRGGDHVKLADFGFATVLSWPEYKVVEPVGSPGYAAPELLRVLPYDGQVDMFSLGVVSFVLLSGILPFGGTAGNIAEVVEDTLRCDPPFDGIQWSAISGGGKDFVKALLSPKPGERPTAKSATFHPWMKVNGRALLSHSLSDRRSGEPKPLLQEYQSLQRKRLKAAVGAVLAANRLHKLLLAGRQDRRDKAVSYDGDHQPEVK 1240
RY+E+E++RATT+ + V VD+ VG +LG+GGFGLVK+G+HR+T SK ALKFV+R LSKKDEELFLMEAGILTGLTH HVVEMRGFY+W+QAYCLAME+MEGGELCEDI+RRVFYSEACARR VLDALAFLHRRGI HRD+KPENLLL RRG ++VKLADFGFA VLS P YKVVEPVGSPGYAAPE+LRV+PYDGQ D+FSLGV+SFVLLSG LPFGG + E+V T +PPFD +QWSA+S +DFV+ALLSP P +RPTA+ A FHPWMKV G LLS SLSDRR GE KPLL+E+Q LQR+RLKAAVGAV+AANRLHK L AG +D D++ G + E K
Sbjct: 6 RYEEYEKDRATTVIVTHAAVHVDYAVGGLLGTGGFGLVKEGLHRQTQSKSALKFVFRKGLSKKDEELFLMEAGILTGLTHAHVVEMRGFYKWEQAYCLAMERMEGGELCEDIVRRVFYSEACARR----VLDALAFLHRRGIIHRDLKPENLLLVRRGSEYVKLADFGFAAVLSQPTYKVVEPVGSPGYAAPEVLRVMPYDGQADVFSLGVISFVLLSGYLPFGGVDDPLTEIVNATFEGNPPFDEVQWSAVSDEARDFVEALLSPSPSDRPTAEKAIFHPWMKVQGNTLLSRSLSDRRFGENKPLLEEFQGLQRRRLKAAVGAVVAANRLHKFLAAGHKDHGDESAGRQGGGKEEEK 359
BLAST of mRNA_P-littoralis_Contig130.98.3 vs. uniprot
Match: A0A7S4E9P7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E9P7_9STRA) HSP 1 Score: 204 bits (519), Expect = 1.320e-54 Identity = 128/347 (36.89%), Postives = 190/347 (54.76%), Query Frame = 2
Query: 122 VCFSGAPNPSSSAKHRYDEFEEERATTIHAENKPVDVDFEVGAVLGSGGFGLVKDGMHRKTLSKCALKFVYRANLSKKDEELFLMEAGILTGLTHGHVVEMRGFYRWDQAYCLAMEKMEGGELCEDILRRVFYSEACARRIILQVLDALAFLHRRGICHRDVKPENLLLHRRGGDH-VKLADFGFATVLSWPEYKVVEPVGSPGYAAPELLRVLPYDGQVDMFSLGVVSFVLLSGILPFGGTAGNIAEVVEDTLRCDPPFDGIQWSAISGGGKDFVKALLSPKPGERPTAKSATFHPWMKVNGRALLSHSLSDRRSGEPKPLLQEYQSLQRKRLKAAVGAVLAANRL 1159
CF G P + + HRY FE D ++ LG G F V+ G++RK K A+K V+++ LSK+D + +E GIL+ L H HVV+ F + Y + +E + GGEL + I++RV+YSE AR ++ +LD L +H + I HRD+KPENLLL DH +KLADFGFAT P + + G+P Y APE++R PY +VDM+S GV+ F+LL G PF A ++++ R FD WS++S + F+K+LL P +RP+A +A H W + L + LS K + + R++LK + AV+A+NR+
Sbjct: 10 ACFEGDHGPYADS-HRYTCFE----------------DLQLDKELGHGAFSTVRLGINRKNKDKFAVKVVHKSKLSKQDIDALHVEVGILSKLRHPHVVKYFDFTQDRSHYYIVLEVVAGGELFDRIVQRVYYSEKEARDLVWVLLDVLHHIHGKKIAHRDLKPENLLLKSTHNDHDIKLADFGFATECKKP---LRDLCGTPAYVAPEIIREKPYGLEVDMWSCGVIVFILLGGYPPFDD-ANGVSDMYAQIKRGAFTFDERYWSSVSSEAQLFIKSLLQVDPSKRPSAAAAMNHDWFTKHATELSTTDLS-------KTIDNMKKWNARRKLKGGIKAVMASNRV 328
BLAST of mRNA_P-littoralis_Contig130.98.3 vs. uniprot
Match: A0A7R9VTA5_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VTA5_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.320e-52 Identity = 123/345 (35.65%), Postives = 184/345 (53.33%), Query Frame = 2
Query: 140 PNPSSSAKHRYDEFEEERATTIHAENKPVDVDFEVGAVLGSGGFGLVKDGMHRKTLSKC-ALKFVYRANLSKKDEELFLMEAGILTGLTHGHVVEMRGFYRWDQAYCLAMEKMEGGELCEDILRRVFYSEACARRIILQVLDALAFLHRRGICHRDVKPENLLLHRRGGD-HVKLADFGFATVLSWPEYKVVEPVGSPGYAAPELLRVLPYDGQVDMFSLGVVSFVLLSGILPFGGTAGNIAEVVEDTLRCDPPFDGIQWSAISGGGKDFVKALLSPKPGERPTAKSATFHPWMKVNGRALLSHSLSDRRSGEPKPLLQEYQSLQRKRLKAAVGAVLAANRLHKL 1168
P P SS+ R+DE + + VLG+G F V++G HR+ S+ A+K V RA L+ +D L E IL LTH H++ + F+ Y L ME+M GGEL + I+ + +Y+E AR + +L+++ + H+ G+ HRD+KPENLLL D VK+ADFGFA + P+ + G+PGY APE+L +PYD + DM+S+GV+ ++LL G PF N E+ R D F W +S KD + +LL+ P R TA A + W+ + +AL H L G L+ + + +++ KAAV V+A N+L L
Sbjct: 115 PQPDSSSGLRFDEL------------------YRLRDVLGTGAFSTVREGYHRRDRSRSFAIKCVIRAKLTDEDAAALLDEVAILKELTHRHIIRLYDFFEEPANYYLVMERMSGGELFDRIVAKAYYNEKEARDVCRILLESVGYCHKHGVAHRDLKPENLLLVSEDNDAEVKIADFGFAKKVLAPKTLTTQ-CGTPGYVAPEILEGVPYDTKADMWSVGVILYILLGGYPPF--IENNQRELFRKIRRGDYEFHEEYWGTVSTDAKDLISSLLTVNPDLRLTAPRALQNKWICGDDKALAGHDL-----GRNHEKLRAFNA--KRKFKAAVSTVMAVNKLQSL 431
BLAST of mRNA_P-littoralis_Contig130.98.3 vs. uniprot
Match: F0Y568_AURAN (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y568_AURAN) HSP 1 Score: 197 bits (501), Expect = 2.570e-52 Identity = 123/347 (35.45%), Postives = 186/347 (53.60%), Query Frame = 2
Query: 122 VCFSGAPNPSSSAKHRYDEFEEERATTIHAENKPVDVDFEVGAVLGSGGFGLVKDGMHRKTLSKCALKFVYRANLSKKDEELFLMEAGILTGLTHGHVVEMRGFYRWDQAYCLAMEKMEGGELCEDILRRVFYSEACARRIILQVLDALAFLHRRGICHRDVKPENLLLHRRGGDH-VKLADFGFATVLSWPEYKVVEPVGSPGYAAPELLRVLPYDGQVDMFSLGVVSFVLLSGILPFGGTAGNIAEVVEDTLRCDPPFDGIQWSAISGGGKDFVKALLSPKPGERPTAKSATFHPWMKVNGRALLSHSLSDRRSGEPKPLLQEYQSLQRKRLKAAVGAVLAANRL 1159
+CF G P + + HRY FE D ++ LG G F V+ ++R K A+K V++ L K+D + +E GI++ L H HVV+ F + Y + +E + GGEL + I++RV+YSE AR ++ +LD L +H + I HRD+KPENLLL DH +KLADFGFAT P + E G+P Y APE+++ PY +VDM+S GV+ F+LL G PF + G +A + FD W ++S K F+K+LL P +RP+A +A H W + L + L L+++ + R++LK + A++AANR+
Sbjct: 1 LCFDGDAGPYADS-HRYTRFE----------------DLQLDKELGHGAFSTVRLAINRTNKDKFAVKVVHKNKLKKQDIDALHVEVGIISKLQHPHVVKYFDFTQDRSHYYIVLEVVAGGELFDRIVQRVYYSEKEARDLVWVLLDVLHHIHGKRIAHRDLKPENLLLKSAHNDHDIKLADFGFATEAKKP---MRELCGTPAYVAPEIIKEKPYGLEVDMWSCGVIVFILLGGYPPFDDSDG-VAAMYATIKAGKYSFDDRYWGSVSPEAKSFIKSLLQVDPSKRPSATAAMNHDWFTKHAAELSTTDLKTTIEN-----LKKWNA--RRKLKGGIKAIMAANRV 319
BLAST of mRNA_P-littoralis_Contig130.98.3 vs. uniprot
Match: A0A7S4N8N5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N8N5_9STRA) HSP 1 Score: 194 bits (494), Expect = 1.860e-51 Identity = 112/308 (36.36%), Postives = 172/308 (55.84%), Query Frame = 2
Query: 251 VLGSGGFGLVKDGMHRKTLSKC-ALKFVYRANLSKKDEELFLMEAGILTGLTHGHVVEMRGFYRWDQAYCLAMEKMEGGELCEDILRRVFYSEACARRIILQVLDALAFLHRRGICHRDVKPENLLLHRRGGD-HVKLADFGFATVLSWPEYKVVEPVGSPGYAAPELLRVLPYDGQVDMFSLGVVSFVLLSGILPFGGTAGNIAEVVEDTLRCDPPFDGIQWSAISGGGKDFVKALLSPKPGERPTAKSATFHPWMKVNGRALLSHSLSDRRSGEPKPLLQEYQSLQRKRLKAAVGAVLAANRLHKL 1168
VLG+G F V++G HR+ S+ A+K V RA L+ +D L E IL LTH H++ + F+ Y L ME+M GGEL + I+ + +Y+E AR + +++++ + H+ G+ HRD+KPENLLL D VK+ADFGFA + P+ + G+PGY APE+L +PYD + DM+S+GV+ ++LL G PF N E+ R D F W +S K+ + +LL+ P R TA A + W+ + ++L H L G L+ + +++ +AAV V+A N+L L
Sbjct: 14 VLGTGAFSTVREGYHRRDRSRSFAIKCVIRAKLTDEDAAALLDEVAILKELTHRHIIRLYDFFEEPANYYLIMERMSGGELFDRIVAKAYYNEKEARDVCRILIESVGYCHKHGVAHRDLKPENLLLVSEDNDAEVKIADFGFAKKVLAPKTLTTQ-CGTPGYVAPEILEGIPYDTRADMWSVGVILYILLGGYPPF--IENNQRELFRKIRRGDYEFHEEYWGTVSKDAKNLISSLLTVNPDLRLTAPKALQNKWICGDDKSLAEHDL-----GRNHEKLRAFNG--KRKFRAAVSTVMAVNKLQSL 311
BLAST of mRNA_P-littoralis_Contig130.98.3 vs. uniprot
Match: A0A1Z5JD75_FISSO (Calcium/calmodulin-dependent protein kinase I n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JD75_FISSO) HSP 1 Score: 191 bits (486), Expect = 4.460e-50 Identity = 112/313 (35.78%), Postives = 173/313 (55.27%), Query Frame = 2
Query: 236 FEVGAVLGSGGFGLVKDGMHRKTLSKCALKFVYRANLSKKDEELFLMEAGILTGLTHGHVVEMRGFYRWDQAYCLAMEKMEGGELCEDILRRVFYSEACARRIILQVLDALAFLHRRGICHRDVKPENLLLHRRGGD-HVKLADFGFATVLSWPEYKVVEPVGSPGYAAPELLRVLPYDGQVDMFSLGVVSFVLLSGILPFGGTAGNIAEVVEDTLRCDPPFDGIQWSAISGGGKDFVKALLSPKPGERPTAKSATFHPWMKVNGRALLSHSLSDRRSGEPKPLLQEYQSLQRKR-LKAAVGAVLAANRLHKL 1168
+ +G LGSG F VK+G H++T ++ A+K V ++ L+ +DE E +L L H +++ + + Y L EKM GGEL + I+++ +Y+E AR L + A+++ H++ I HRD+KPENLLL D ++K+ADFGFA P + G+PGY APE+L PYD Q DM+SLGV+ +++L G PF N E+ + F W +S KD +++LL KP R TA A + W+ + +L H L+D L++ ++ KR +KAAV AV+A +L+ L
Sbjct: 37 YRLGKELGSGAFSTVKEGFHKETKAEYAVKIVTKSKLTYEDEAALKDEISVLKELNHPNIIRLYDVFEEKDYYFLVTEKMMGGELFDRIVQKSYYNEKEARDTALVLFQAISYCHQKKIAHRDLKPENLLLTSTDSDSNIKIADFGFAKKCPKPNSLTTQ-CGTPGYVAPEILEGTPYDMQADMWSLGVIVYIILGGYPPF--MEQNQRELFRKIRKGQYQFHVEYWGQVSEDAKDLIRSLLVVKPSARYTATHALNNKWITGDANSLKEHDLADN--------LKKLKAFNAKRKMKAAVKAVMATQKLNSL 338
BLAST of mRNA_P-littoralis_Contig130.98.3 vs. uniprot
Match: A0A7S4DC48_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC48_HETAK) HSP 1 Score: 191 bits (484), Expect = 1.920e-49 Identity = 109/316 (34.49%), Postives = 170/316 (53.80%), Query Frame = 2
Query: 236 FEVGAVLGSGGFGLVKDGMHRKTLSKCALKFVYRANLSKKDEELFLMEAGILTGLTHGHVVEMRGFYRWDQAYCLAMEKMEGGELCEDILRRVFYSEACARRIILQVLDALAFLHRRGICHRDVKPENLLLHRRGGD-HVKLADFGFATVLSWPEYKVVEPVGSPGYAAPELLRVLPYDGQVDMFSLGVVSFVLLSGILPFGGTAGN--IAEVVEDTLRCDPPFDGIQWSAISGGGKDFVKALLSPKPGERPTAKSATFHPWMKVNGRALLSHSLSDRRSGEPKPLLQEYQSLQ-RKRLKAAVGAVLAANRLHKLL 1171
+E+ LGSG F V++G+H++T + A+K + R NLS++DEE E IL G+ H +++++ F+ Y L E M+GGEL + I+++ FY+E AR ++ +L + H I HRD+KPENLL+ D LADFGFA +L + E G+PGY APE+L +PY VDM+S GV+ ++LL G PF + A++ P F W +S KD + +L +R T ++A HPW++ + L +L L+E + R++ KA A++AANRL ++
Sbjct: 72 YELQRELGSGSFSTVREGIHKQTNERFAVKVIKRMNLSREDEEALAEEVTILHGINHPNIIKVFDFFEEKDFYYLVTELMQGGELFDRIVKKTFYNEKEARDLVKILLSIVKHCHENDIVHRDLKPENLLMTSADDDIRFALADFGFAKLLRGNTLTLTEQCGTPGYVAPEILNGVPYGKPVDMWSFGVILYILLGGYAPFSENNQSKLFAKIKSGAYEFHPDF----WGNVSSDAKDLIARMLQVDVAKRITVEAAYNHPWVQADADVLAERALDGN--------LEELRRFNARRKFKAGGKAIVAANRLASMI 375
BLAST of mRNA_P-littoralis_Contig130.98.3 vs. uniprot
Match: A0A7S3Y416_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y416_HETAK) HSP 1 Score: 191 bits (484), Expect = 1.970e-49 Identity = 109/316 (34.49%), Postives = 170/316 (53.80%), Query Frame = 2
Query: 236 FEVGAVLGSGGFGLVKDGMHRKTLSKCALKFVYRANLSKKDEELFLMEAGILTGLTHGHVVEMRGFYRWDQAYCLAMEKMEGGELCEDILRRVFYSEACARRIILQVLDALAFLHRRGICHRDVKPENLLLHRRGGD-HVKLADFGFATVLSWPEYKVVEPVGSPGYAAPELLRVLPYDGQVDMFSLGVVSFVLLSGILPFGGTAGN--IAEVVEDTLRCDPPFDGIQWSAISGGGKDFVKALLSPKPGERPTAKSATFHPWMKVNGRALLSHSLSDRRSGEPKPLLQEYQSLQ-RKRLKAAVGAVLAANRLHKLL 1171
+E+ LGSG F V++G+H++T + A+K + R NLS++DEE E IL G+ H +++++ F+ Y L E M+GGEL + I+++ FY+E AR ++ +L + H I HRD+KPENLL+ D LADFGFA +L + E G+PGY APE+L +PY VDM+S GV+ ++LL G PF + A++ P F W +S KD + +L +R T ++A HPW++ + L +L L+E + R++ KA A++AANRL ++
Sbjct: 73 YELQRELGSGSFSTVREGIHKQTNERFAVKVIKRMNLSREDEEALAEEVTILHGINHPNIIKVFDFFEEKDFYYLVTELMQGGELFDRIVKKTFYNEKEARDLVKILLSIVKHCHENDIVHRDLKPENLLMTSADDDIRFALADFGFAKLLRGNTLTLTEQCGTPGYVAPEILNGVPYGKPVDMWSFGVILYILLGGYAPFSENNQSKLFAKIKSGAYEFHPDF----WGNVSSDAKDLIARMLQVDVAKRITVEAAYNHPWVQADADVLAERALDGN--------LEELRRFNARRKFKAGGKAIVAANRLASMI 376
BLAST of mRNA_P-littoralis_Contig130.98.3 vs. uniprot
Match: L8GMM0_ACACA (Protein serine/threonine kinase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GMM0_ACACA) HSP 1 Score: 187 bits (474), Expect = 5.830e-49 Identity = 102/267 (38.20%), Postives = 157/267 (58.80%), Query Frame = 2
Query: 236 FEVGAVLGSGGFGLVKDGMHRKTLSKCALKFVYRANLSKKDEELFLMEAGILTGLTHGHVVEMRGFYRWDQAYCLAMEKMEGGELCEDILRRVFYSEACARRIILQVLDALAFLHRRGICHRDVKPENLLLHRRGGD-HVKLADFGFATVLSWPEYKVVEPV-GSPGYAAPELLRVLPYDGQVDMFSLGVVSFVLLSGILPFGGTAGNIAEVVEDTLRCDPPFDGIQWSAISGGGKDFVKALLSPKPGERPTAKSATFHPWMKVNGR 1030
+EV LG G F +VK G+++KT K A+K + R+N+ K E+ LME IL + H +++++ D AME + GGEL + I+ + Y+E A+ ++ +++ A+ +LH I HRD+KPENLL+ D VK+ADFG + ++ E K+++ G+PGY APE+L YD +VDM+S+GV++++LL G PF A + EV E L+ + + W IS GKDF+ LL P +R TAK A H W+ G+
Sbjct: 11 YEVKKELGRGAFSVVKLGVNKKTKEKVAIKVIDRSNVGKDYEKNLLMEMEILQRVHHPNIIQLHEMIEEDNKIYFAMELVTGGELFDRIVEKGSYTEEDAKVLVRKIVSAIEYLHDMNIAHRDLKPENLLVKSIADDTEVKIADFGLSKIID--EQKMMQTACGTPGYVAPEVLNAEGYDKEVDMWSIGVITYILLCGFPPF--YAETVPEVFEQILKAEYDYPEEYWGEISAEGKDFINHLLVVDPKDRLTAKQALEHKWLHSKGK 273 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig130.98.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig130.98.3 >prot_P-littoralis_Contig130.98.3 ID=prot_P-littoralis_Contig130.98.3|Name=mRNA_P-littoralis_Contig130.98.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=419bp MFWDWFRVCFSGAPNPSSSAKHRYDEFEEERATTIHAENKPVDVDFEVGAback to top mRNA from alignment at P-littoralis_Contig130:415853..430453- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig130.98.3 ID=mRNA_P-littoralis_Contig130.98.3|Name=mRNA_P-littoralis_Contig130.98.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=14601bp|location=Sequence derived from alignment at P-littoralis_Contig130:415853..430453- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig130:415853..430453- >mRNA_P-littoralis_Contig130.98.3 ID=mRNA_P-littoralis_Contig130.98.3|Name=mRNA_P-littoralis_Contig130.98.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1257bp|location=Sequence derived from alignment at P-littoralis_Contig130:415853..430453- (Pylaiella littoralis U1_48)back to top |