mRNA_P-littoralis_Contig130.95.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig130.95.1 vs. uniprot
Match: D8LC77_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC77_ECTSI) HSP 1 Score: 401 bits (1031), Expect = 8.620e-132 Identity = 238/345 (68.99%), Postives = 266/345 (77.10%), Query Frame = 3
Query: 303 GVAPSERRGWGAIEEEGKEEGPSLMEQMMEEAMDAREXXXXXXRQKQLRDTKQNFGGGLKKGFLSQQAAPAASSTAR-----------KGKTSTRRGTGEQSSTSGSETSEKESMPAIITGGTASSGGLEFDVSAEAENNSSGSLLLLEVQEAMNQSAAGPLGSTHSEGKVKDWLTPELLDTISKKPRLAAMLTDPRFAKAMQLMSTSPEDALGMFASSPEARQSFTELMSLLSKHFTAMGEAADEKAAAEEADRKRVADGPLAQEALRRAAEGVGVAAMPATTEEAANVEKVLQQPELRELLMDPGMQRVLQECGEPHMLARYLLHPEFGPKLQLMARAGLISF 1304
GVA ER WGA++EE K++GPSLMEQMM EAM A+E R +Q RD KQ FGGGLKKGFLS+ A S+A +GK STSG+ + S+P +ITG ASSGGLEFDVSAEA + +S SLLL EVQEAM SA+ PLG G ++WLTPELL IS+KPRLAAMLTDPRF+KAM+LMSTSP+DALGMF SS EAR+SFTELMSLLSKHFTAMG+AADEKAAAEEADR+RVADGPLAQEALRRAAEGVGVAA PAT EE A V+KVLQQPELRELLMDPGMQRVLQECGEP LARY+ HPEFGPKLQLMA+AGLISF
Sbjct: 14 GVASRERLDWGALDEERKQKGPSLMEQMMAEAMAAKEVKSQEQRLEQSRDAKQTFGGGLKKGFLSRPTRTTAVSSAXXXXXXXXXXXXRGK----------ESTSGAPPEVEGSIP-VITGRKASSGGLEFDVSAEASSTTSDSLLLPEVQEAMKHSASNPLGGASGGGGGQEWLTPELLQKISEKPRLAAMLTDPRFSKAMELMSTSPKDALGMFESSAEARESFTELMSLLSKHFTAMGDAADEKAAAEEADRRRVADGPLAQEALRRAAEGVGVAATPATAEETATVDKVLQQPELRELLMDPGMQRVLQECGEPQELARYMRHPEFGPKLQLMAKAGLISF 347
BLAST of mRNA_P-littoralis_Contig130.95.1 vs. uniprot
Match: A0A7S2RZ79_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ79_9STRA) HSP 1 Score: 118 bits (296), Expect = 4.230e-25 Identity = 79/214 (36.92%), Postives = 119/214 (55.61%), Query Frame = 3
Query: 678 AENNSSGSLLLLEVQEAMNQSAAGPLGSTHSEGKVKDWLTPELLDTISKKPRLAAMLTDPRFAKAMQLMSTSPEDALGMFASSPEARQSFTELMSLLSKHFTAMGEA----ADEKAAAEEADRKRVADGPLAQEALRRAAEGVGVAAMPA---TTEEAANVEKVLQQPELRELLMDPGMQRVLQECGEPHMLARYLLHPEFGPKLQLMARAGLI 1298
A++ L+L EVQ+AM +SA G +G +G W+T +L+ +K P LA L+DPR+ A+Q + +P+ A+ F PE E + +HFT +G+ D AA GPLA++A+RRA+E + P + EE A V++++Q ELRELLMD G+QRV+ EC +P L Y+ +GPKL+ +A AGL+
Sbjct: 184 AKDTKKNDLVLDEVQDAM-KSAGGGMGQMLQDGA---WMTEDLMTKFAKNPLLAKGLSDPRYTAAIQELQKNPKQAMEKFQHDPELSAFLNEFCQTMGEHFTKLGDQQQPPVDPATAA--------VHGPLAEDAVRRASERAKQSPSPPPQPSKEEDAQVQRIMQDTELRELLMDSGLQRVMMECQQPGKLQMYMRDKTWGPKLRKLADAGLV 385
BLAST of mRNA_P-littoralis_Contig130.95.1 vs. uniprot
Match: A0A835Z085_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z085_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.440e-22 Identity = 73/210 (34.76%), Postives = 99/210 (47.14%), Query Frame = 3
Query: 702 LLLLEVQEAMNQSAAGPLGSTHSEGKVKDWLTPELLDTISKKPRLAAMLTDPRFAKAMQLMSTSPEDALGMFASSPEARQSFTELMSLLSKHFTAMGEAADEKAAAEEADRKRVADGPLAQEALRRAAEGVGVAAMPATTEEA-----------ANVEKVLQQPELRELLMDPGMQRVLQECGEPHMLARYLLHPEFGPKLQLMARAGLI 1298
++L EVQ+AM + L ST + WLTP LL I+ +P LAA L PRF +A++LM P A+ +F +AR FTEL+ LL HF +G + A A+V ++L LRELL+DPGMQ VLQEC P L Y HPE+GPK++ +A+AGL+
Sbjct: 1 VVLPEVQDAMAEQGRALLSSTDA------WLTPALLSKIAARPALAAALQSPRFTRALELMRDDPRAAMALFGGDADARALFTELLGLLGTHFEELGAQTSQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAADADVARILADEGLRELLVDPGMQTVLQECSAPGRLRHYAAHPEWGPKIRRLAQAGLV 204
BLAST of mRNA_P-littoralis_Contig130.95.1 vs. uniprot
Match: A0A7R9U615_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U615_9STRA) HSP 1 Score: 104 bits (260), Expect = 1.560e-20 Identity = 78/209 (37.32%), Postives = 114/209 (54.55%), Query Frame = 3
Query: 702 LLLLEVQEAMNQSAAGPLGSTHSEGKVKDWLTPELLDTISKKPRLAAMLTDPRFAKAMQLMSTSPEDALGMFASSPEARQSFTELMSLLSKHFTAMGEAADEKAAAEEADRKRV---ADGPLA------QEALRRAAEGVGVAAMPATTEEAANVEKVLQQPELRELLMDPGMQRVLQECG-EPHMLARYLLHPEFGPKLQLMARAGLI 1298
L L EVQ AM +S A PL + SEG WLTPEL+ I + PRL A +++P F + M ++P L SPE ++ E M L+ KHF A+G D K+ A++ ++++V A GPLA +EA ++A G + + + E V+ LQ PE+R+LLMD +QRVL E P R + P+ K++ MA GL+
Sbjct: 167 LRLPEVQAAMKESMA-PLQAKLSEGS---WLTPELMQKIQESPRLMAAMSNPAFGALLGRMQSNPSQVLKELKDSPETQELLKEFMVLMGKHFEALGAEDDAKSEAKQEEQRQVEQAARGPLAKKILEEEEAKKKAGSGSTLDHL--SDRERKEVDDHLQNPEVRQLLMDEDVQRVLVEASTNPAAFHRAMQSPDIARKIRRMAHLGLV 369
BLAST of mRNA_P-littoralis_Contig130.95.1 vs. uniprot
Match: A0A7S2EKF9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EKF9_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 6.950e-17 Identity = 64/231 (27.71%), Postives = 108/231 (46.75%), Query Frame = 3
Query: 702 LLLLEVQEAMNQSAAGPLGSTHSEGKVKDWLTPELLDTISKKPRLAAMLTDPRFAKAMQLMSTSPEDALGMFASSPEARQSFTELMSLLSKHFTAMGEAADEKAAAEE-----------------ADRKRVADGPLAQEALRRAAEG------------VGVAAMPATTEEAANVEKVLQQPELRELLMDPGMQRVLQECGEPHMLARYLLHPEFGPKLQLMARAGLISFS 1307
L+ E+Q+AM + + + + W TP+L++ ISK PRL A L++P+FA A++ + +P A+ F + PE E +L +HFT +GE ++ + R + GP+A++ L++ A ++ V+ +L EL +LLMD Q ++QEC P + Y+ HPE GPKL+ + +AGL+ S
Sbjct: 90 LIFEEIQDAMKNTPSFDINNASGS-----WATPDLMEKISKNPRLLAGLSNPKFAAALEALQKNPRMAMKKFQNHPEIMDYLHEFCGVLGEHFTKLGEEQEKXXXXXXXXXXXXXXXXXXXXXSISSRSKKNIGPIAEKVLKKHATNQTTXXXXXXXXXXXXXXXXTARKDKEKVDSILANRELVDLLMDAEFQNIMQECSIPGRMQMYMQHPEHGPKLRKLLQAGLLQVS 315
BLAST of mRNA_P-littoralis_Contig130.95.1 vs. uniprot
Match: W4GNU8_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GNU8_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 3.380e-15 Identity = 62/200 (31.00%), Postives = 99/200 (49.50%), Query Frame = 3
Query: 699 SLLLLEVQEAMNQSAAGPLGSTHSEGKVKDWLTPELLDTISKKPRLAAMLTDPRFAKAMQLMSTSPEDALGMFASSPEARQSFTELMSLLSKHFTAMGEAADEKAAAEEADRKRVADGPLAQEALRRAAEGVGVAAMPATTEEAANVEKVLQQPELRELLMDPGMQRVLQECGEPHMLARYLLHPEFGPKLQLMARAGLI 1298
SL L EV +AMNQ K +DW+TP + + + P+L + +PRF A+Q MST+P A+ + + P+ F + + + HF +G+ +EK A P + R+A + +M + EE A V+++L PEL VL+ C P +L++Y+ FGPK+Q +ARAGL+
Sbjct: 101 SLHLPEVHDAMNQM---------QNLKPEDWMTPAFFEKLGRNPKLCQAMKNPRFTAAIQEMSTNPTAAILKYQNDPDFGVMFKDFLQFMGHHFEELGKI-EEKTAI-----------PTRDDIQRQA-----LTSMSRSPEEDAVVQRILADPELXXXXXXXXXXXVLRACQVPGVLSKYMNDKVFGPKIQKLARAGLV 274
BLAST of mRNA_P-littoralis_Contig130.95.1 vs. uniprot
Match: F0Y4B4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4B4_AURAN) HSP 1 Score: 91.3 bits (225), Expect = 4.560e-15 Identity = 66/190 (34.74%), Postives = 99/190 (52.11%), Query Frame = 3
Query: 741 AAGPLGSTHSEG---KVKDWLTPELLDTISKKPRLAAMLTDPRFAKAMQLMSTSPEDALGMFASSPEARQSFTELMSLLSKHFTAMGEAADEKAAAEEADRKRVADGPLAQEALRRAAEGVGVAAMPATT-EEAANVEKVLQQPELRELLMDPGMQRVLQECGEPHMLARYLLHPEFGPKLQLMARAGLI 1298
AA GS+H K DW+TPEL+ ++++P LA + DPR A++ + P+ F PE +Q T+ ++ HF +G A AD K GPLA + + AA+G G A PA T EE V+ VL LR+LLMDP Q ++Q C +P R +++P+ ++ +A AGL+
Sbjct: 158 AANMEGSSHPMAQALKGGDWVTPELVKAMAERPALARGMGDPRCQAALEALRKDPKAGAKQFDDDPELKQFLTDFCEVMGGHFEKLGAAXXXXXXT--ADEKEQL-GPLAAKVVEDAAKGQGPA--PAKTPEEIKQVDDVLNNAALRDLLMDPKTQLLMQRCADPREFQRAMMNPDERAIIRKLADAGLV 342
BLAST of mRNA_P-littoralis_Contig130.95.1 vs. uniprot
Match: UPI0018D935CA (uncharacterized protein LOC119730362 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D935CA) HSP 1 Score: 84.0 bits (206), Expect = 9.370e-14 Identity = 63/204 (30.88%), Postives = 102/204 (50.00%), Query Frame = 3
Query: 714 EVQEAMNQSAAGPLGSTHSEGKVKDWLTPELLDTISKKPRLAAMLTDPRFAKAMQLMSTSPEDALGMFASSPEARQSFTELMSLLSKHFTAMGEAADEKAAAEEADRK---RVADGPLAQEALRRAAEGVGVAAMPATTEEAANVEKVLQQPELRELLMDPGMQRVLQECGEPHMLARYLLH---PEFGPKLQLMARAGLISFS 1307
EVQEA+ A PL K+W+T +LL + K PRLA LTDPRFA A+Q T+P A+ + E +Q + +LL HF+ MG ++ + + R D P + +++ AT E+ A ++++L PE+RE++MD +QR+++ + +L PE K+Q + AGL+ F+
Sbjct: 153 EVQEALK--ATAPLLQR------KEWVTDDLLSNVEKHPRLAKQLTDPRFASAVQKFQTNPHQAMQDYKDDTEVQQFLKDFSALLGDHFSTMGGSSPPSFPSSVPPPQGTIRTHDSPNGADIKVKSSTNP----KQATAEDEAKMQQILSDPEIREIMMDKKIQRLMEALRNNLDQGQRILQSADPEMRAKIQKLVDAGLLGFA 344
BLAST of mRNA_P-littoralis_Contig130.95.1 vs. uniprot
Match: A0A5D6XKE5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKE5_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.050e-12 Identity = 57/169 (33.73%), Postives = 89/169 (52.66%), Query Frame = 3
Query: 801 ELLDTISKKPRLAAMLTDPRFAKAMQLMSTSPEDALGMFASSPEARQSFTELMSLLSKHFTAMGEAADEKAAAEEADRKRVADGPLAQEALRRAAEGVGVAAMPATTEEAANVEKVLQQPELRELLMDPGMQRVLQECGE-PHMLARYLLHPEFGPKLQLMARAGLISF 1304
+L++ ++K PRL L +PRF +A+ M PE A+ + + P + + + HF +G+ +++AAA ++R+ D + RRAA +A M + EE A V+K+LQ PEL + L D + LQ C E P L R P KL+L+A AGL+ F
Sbjct: 169 KLIEKLAKNPRLVLALQNPRFTQAIDEMQREPEAAIRKYRNDPAVSAMLQDFLGFMGSHFEELGK--EQEAAA---SKQRIVD----LDETRRAA----IAGMERSPEEDAQVQKILQSPELLQALSDADLMARLQRCRESPQELLRLQSDPSLRHKLRLLADAGLVRF 324
BLAST of mRNA_P-littoralis_Contig130.95.1 vs. uniprot
Match: UPI001455A77B (uncharacterized protein LOC117296798 n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455A77B) HSP 1 Score: 78.2 bits (191), Expect = 6.720e-12 Identity = 61/204 (29.90%), Postives = 105/204 (51.47%), Query Frame = 3
Query: 714 EVQEAMNQSAAGPLGSTHSEGKVKDWLTPELLDTISKKPRLAAMLTDPRFAKAMQLMSTSPEDALGMFASSPEARQSFTELMSLLSKHFTAMGEAADEKAAAEEADRKRVADGPLAQEALRRAAEGVGVAAMP--ATTEEAANVEKVLQQPELRELLMDPGMQRVLQEC-GEPHMLARYLLH--PEFGPKLQLMARAGLISFSS 1310
EVQEA+ A PL K+W+T +LL + K P +A LTDPR+A+A++ ++P+ A+ + + + +Q F + LL +HF++MG AA+ V Q+A +A V + P AT + A ++++L E+RE+++D +QR+++ P R L P+ K+ + AGL+ F+S
Sbjct: 143 EVQEALK--ATAPLLQN------KEWITDDLLTKLEKHPNMAKKLTDPRYAQAVEKFQSNPQQAMLEYKDNEDVQQFFKDFCGLLGEHFSSMG-----GGAAQPTPTPPVNPNIRTQDASSKADIAVRSSTNPNQATAADEAKMQQILSNAEIREIMVDQRIQRLMEALRSNPDEGQRILQSAGPDMRSKVHKLVEAGLLGFAS 333 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig130.95.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig130.95.1 >prot_P-littoralis_Contig130.95.1 ID=prot_P-littoralis_Contig130.95.1|Name=mRNA_P-littoralis_Contig130.95.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=402bp MVVLVSEASATASKAVSAPRHGSSARETLDVPADGGRSNLAGRLSVLNLVback to top mRNA from alignment at P-littoralis_Contig130:413944..416010+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig130.95.1 ID=mRNA_P-littoralis_Contig130.95.1|Name=mRNA_P-littoralis_Contig130.95.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2067bp|location=Sequence derived from alignment at P-littoralis_Contig130:413944..416010+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig130:413944..416010+ >mRNA_P-littoralis_Contig130.95.1 ID=mRNA_P-littoralis_Contig130.95.1|Name=mRNA_P-littoralis_Contig130.95.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1206bp|location=Sequence derived from alignment at P-littoralis_Contig130:413944..416010+ (Pylaiella littoralis U1_48)back to top |