prot_P-littoralis_Contig130.92.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig130.92.1
Unique Name	prot_P-littoralis_Contig130.92.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	378

Homology

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BLAST of mRNA_P-littoralis_Contig130.92.1 vs. uniprot
Match: D8LC76_ECTSI (Possible CAMK/ Leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC76_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 2.330e-38
Identity = 140/354 (39.55%), Postives = 183/354 (51.69%), Query Frame = 0

Query:   29 AVEDATDEARGERTAPKGQRAHRKSHEDHRSH-YPPEDCLSELPTPIGTVA--QVLVETPTNEEEEERNATAAAPQKRDCADVTRIGDKHENTQESLSSVDPTGPDAQVTTVVGVTVDVAKPLDGTVPHIATSRKGSTVRQTGREIQAAAGYRRRSSYLPGQAVGRARSSRGASVQLALPFFSEEGWPSACNPSS-VDEANASQAGADVQAQASDHTEEDQQWEDYHALNPRRQHSTPNFVSVRSQFGGKRISVELFESGDSDXXXXXXXXXSGEDRGAKKLEAEKAKLAEGPLSWQQSEEGKKRMAQLTKATVRVETPANKLSRKYLKLFAPSNSAHETYRVLATMHRRMNGT 378
            A  D  DEA+ E     G+ A R + +  RS     ED  SEL  P G  A  QVL E                  +R+C+     G+    TQ    ++ P     Q++           PL+ T    A +R  +    TG   Q A  Y+RR+SY+PGQA+   RS+  ASVQLALP    EG P+  N +S  D        A+ + +  D     Q W++YHAL+P RQHST + V+ R +   +++SVELF  GD D  XXXXXXX                  + PL W QS+EG+  M +LTK TV VE+PA K+SRKYLKLFAPSNSAH+TY+VLA +HRRMNGT
Sbjct:  128 ASRDPADEAKQETATTLGESAQRPAVDHKRSQSLTDEDFFSELSVPTGMAAAGQVLAE------------------RRECSGPRLDGENDHLTQTPAPALPPVDSTTQLSGDA-----TTLPLE-TTRQAAGARAVAAFDPTGIGTQPAVRYQRRASYMPGQAMRPGRSAARASVQLALPPIVTEGEPAPANETSNADAVRTIHEAAESEVEEPDQPMGGQTWKEYHALHPDRQHSTADLVAYR-RTRNRQLSVELFGEGD-DTSXXXXXXXXXXXXXXXXXXXXXXXXLDTPL-WPQSDEGRSMMEKLTKVTVAVESPATKISRKYLKLFAPSNSAHDTYKVLAALHRRMNGT 454

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig130.92.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig130.92.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LC76_ECTSI	2.330e-38	39.55	Possible CAMK/ Leucine rich repeat protein n=2 Tax...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 283..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..317

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig130	contig	P-littoralis_Contig130:409946..412404 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig130.92.1	mRNA_P-littoralis_Contig130.92.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig130 409946..412404 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig130.92.1 ID=prot_P-littoralis_Contig130.92.1|Name=mRNA_P-littoralis_Contig130.92.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=378bp
MEVNKQKGERGMEESSKSEEANSDGEGDAVEDATDEARGERTAPKGQRAH
RKSHEDHRSHYPPEDCLSELPTPIGTVAQVLVETPTNEEEEERNATAAAP
QKRDCADVTRIGDKHENTQESLSSVDPTGPDAQVTTVVGVTVDVAKPLDG
TVPHIATSRKGSTVRQTGREIQAAAGYRRRSSYLPGQAVGRARSSRGASV
QLALPFFSEEGWPSACNPSSVDEANASQAGADVQAQASDHTEEDQQWEDY
HALNPRRQHSTPNFVSVRSQFGGKRISVELFESGDSDDSSTSSTSSSGED
RGAKKLEAEKAKLAEGPLSWQQSEEGKKRMAQLTKATVRVETPANKLSRK
YLKLFAPSNSAHETYRVLATMHRRMNGT