prot_P-littoralis_Contig130.88.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig130.88.5
Unique Nameprot_P-littoralis_Contig130.88.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1104
Homology
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BLAST of mRNA_P-littoralis_Contig130.88.5 vs. uniprot
Match: D8LC76_ECTSI (Possible CAMK/ Leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC76_ECTSI)

HSP 1 Score: 662 bits (1707), Expect = 1.460e-211
Identity = 638/914 (69.80%), Postives = 707/914 (77.35%), Query Frame = 0 
Query:  207 FQFPVTFSFWLSRASD------LRVLDLGSNEVKAPIPEMPGMRQLQSLVLDNNQMYS-LPEGLAETCPNLFKLHLQNNRLAGELPQSLGKLTKLEVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERMVVNCECLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLFLKTSLGPDACGLQWAGNPRIVDSRHHFASTVAGIRRAEPGIEGTKVLSPAELTGQQRQGQGQRQSCSPAFKPIRLTLTLPDREPLCRLRVPSTSHGYRGRPAELYADPGQTSRKNGSISLSEYQRQQRDSKVLDGETGIEAVEEGF-SEVGDDRGGVGWPWANSEDVCYFLLKVIAGNAVMLIDYTIAARLYMMGCLWGCVLVMLWKAMAGFEGVLATRRLGYGRWWLPLSAFGLALTWQARICFHHSCESDLFQALQQVEWRWHAMIQLSTQLAAALSWWDRGQVGFWYLLVSLGTKVLVVGIVSMQRLDDRRLLRDKESRSASPPIGSAPSTFKHRFLPWLRNSAWPRLIMVGFHVAEVCERTIPLAPVTAALGDMAPLAPLAMAPGMFARYLARRPRTSGSSSDGGMMSAVKTALKFSLALDSAFGAGTPGHVFAAISTTVEATVFKTIASKAPRDYPEGLHQFVLYTLSAMFVFTWAVVVLEVVIPIGREREWPLLLPPPPSPRLRLRRLAFLQY---FSTPRYRRAITTTIHVQPSPSSVMISRSGSDSE----RVEDGSQKPGWRGA---ASVVPME 1102
            FQFPV F FW  R+S       +R L+LGSNEV+ P P++ GM QLQSLVLD N+MY  L E LAETCPNL++L LQ NRL+GE+P SLG LTKLE LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERMV+NCECL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLFLK SLGP+ACG +WAGNPRIVDSRHHFAS VAG+RRA     G         T   +    Q+ S + +FKPI LTL +PD  P C  +      GY            Q   K G      + +Q + S+ LD E GI  +EE +  E GDD  G    WANSED CYFL KV+ GNA++LID  IAARLY++GC WG  LV+LW+ M+G EGVLAT RLGYGR WLP++A GLALTWQAR CFHHSCESDLFQ LQQVEWRWHAMIQLSTQLAAALSWWDRGQVG+WYLL S+G K LVVG+VSMQRLDDRRL +DKE RS +P  G  PS F+ RFLPWLR+SAWPRLI+VGFHVAEVCERTIPLA + AALG    LAPLAMAPGM ARY+ARR   S +  DG ++SAVK+ALK SLALDSAFGAGTP HV AAIS+T+E  VF+T+ S APR YP+ LHQ +LY +S +FVFTW +VVLEV IP+GRER   LLL     PR+  RRLA L      S  R  +    TIHVQPS SS+ +  + S S      +ED  + PGWRG    ASVVP+E
Sbjct:  719 FQFPVKFQFWFLRSSGATGGSGMRSLNLGSNEVEEPFPDLQGMEQLQSLVLDQNRMYGGLTESLAETCPNLYRLSLQKNRLSGEIPHSLGMLTKLEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERMVMNCECLQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLFLKASLGPNACGFKWAGNPRIVDSRHHFAS-VAGLRRA-----GGNQADRGTATPPSKDQHQQQHSTNSSFKPIPLTLRVPDL-PGCEEKSRLRGSGY------------QVGAKGG------FSQQLQGSEELDREIGIGVMEEDYLCEYGDDGTGASRLWANSEDFCYFLFKVVVGNALVLIDLVIAARLYLIGCKWGFFLVILWRVMSGMEGVLATHRLGYGRCWLPMAALGLALTWQARKCFHHSCESDLFQVLQQVEWRWHAMIQLSTQLAAALSWWDRGQVGYWYLLASVGMKALVVGVVSMQRLDDRRLTQDKERRSETPAAGLVPSVFRTRFLPWLRDSAWPRLILVGFHVAEVCERTIPLASLVAALGGWMFLAPLAMAPGMCARYVARRALVSRAKGDG-VVSAVKSALKTSLALDSAFGAGTPVHVAAAISSTLETIVFQTVGSNAPRGYPDELHQLLLYWISVLFVFTWVIVVLEVTIPVGRERT--LLL----RPRVLARRLALLGSRWTSSRSRSNKPTMRTIHVQPSSSSLGLPHTPSGSSDGAGAIEDDQRTPGWRGGRRVASVVPVE 1600
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig130.88.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LC76_ECTSI1.460e-21169.80Possible CAMK/ Leucine rich repeat protein n=2 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 484..507
e-value: 340.0
score: 0.7
coord: 142..165
e-value: 210.0
score: 2.4
coord: 363..387
e-value: 34.0
score: 8.9
coord: 166..189
e-value: 86.0
score: 5.6
coord: 46..70
e-value: 110.0
score: 4.6
coord: 411..435
e-value: 61.0
score: 6.8
coord: 339..362
e-value: 150.0
score: 3.6
coord: 243..266
e-value: 4.9
score: 15.8
coord: 291..315
e-value: 70.0
score: 6.3
coord: 22..45
e-value: 110.0
score: 4.7
coord: 94..118
e-value: 90.0
score: 5.4
coord: 459..483
e-value: 29.0
score: 9.4
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 244..302
e-value: 2.6E-7
score: 30.3
coord: 96..155
e-value: 3.5E-9
score: 36.3
coord: 412..472
e-value: 2.5E-8
score: 33.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..210
e-value: 3.4E-56
score: 192.7
coord: 391..536
e-value: 4.9E-43
score: 149.2
coord: 211..390
e-value: 1.3E-42
score: 147.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1069..1103
NoneNo IPR availablePANTHERPTHR48057LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1coord: 115..408
coord: 243..528
coord: 324..527
coord: 2..239
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 216..533
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 3..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig130contigP-littoralis_Contig130:402295..409771 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig130.88.5mRNA_P-littoralis_Contig130.88.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig130 401041..409925 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig130.88.5 ID=prot_P-littoralis_Contig130.88.5|Name=mRNA_P-littoralis_Contig130.88.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1104bp
MKSINLSDNHISGPIPMELGSLLQLQTLLLHGNNLRDIIPPLLGSLISLI
RLSLGNNKLSGPLPDSLGNLIHLKHFSAESNRLTGPISSFLCHMTALENF
NLSNNELSGIIPEKIGSLTRIKKLDFSRNQFSGKIPTSLGGLSGLNWLRL
DHNQIGGSVPANLADLKELLILDLSFNRLSGPLPTALATLLNLTTVSLRG
NSFEGPFQFPVTFSFWLSRASDLRVLDLGSNEVKAPIPEMPGMRQLQSLV
LDNNQMYSLPEGLAETCPNLFKLHLQNNRLAGELPQSLGKLTKLEVLNIS
DNCFEGSLPPSMESLTLLHTFLASNNELSGELPSFVGSLTLLTCLALDGN
QFSGFMPRELGKLTLLKRLYLERNELVGSIPKEMSKCVCLEELYLQDNNL
WGRIPDSLRALRRLRYLYLFRNKLTGTVPEWLGELSHLRGLILGENRLRG
HIPWQLGHLHKLEDLYLNDNNLDGSIPERMVVNCECLRRLYLGGNRLTGT
VPRALRHVRDLRELNIERNNFHGELPIPLFLKTSLGPDACGLQWAGNPRI
VDSRHHFASTVAGIRRAEPGIEGTKVLSPAELTGQQRQGQGQRQSCSPAF
KPIRLTLTLPDREPLCRLRVPSTSHGYRGRPAELYADPGQTSRKNGSISL
SEYQRQQRDSKVLDGETGIEAVEEGFSEVGDDRGGVGWPWANSEDVCYFL
LKVIAGNAVMLIDYTIAARLYMMGCLWGCVLVMLWKAMAGFEGVLATRRL
GYGRWWLPLSAFGLALTWQARICFHHSCESDLFQALQQVEWRWHAMIQLS
TQLAAALSWWDRGQVGFWYLLVSLGTKVLVVGIVSMQRLDDRRLLRDKES
RSASPPIGSAPSTFKHRFLPWLRNSAWPRLIMVGFHVAEVCERTIPLAPV
TAALGDMAPLAPLAMAPGMFARYLARRPRTSGSSSDGGMMSAVKTALKFS
LALDSAFGAGTPGHVFAAISTTVEATVFKTIASKAPRDYPEGLHQFVLYT
LSAMFVFTWAVVVLEVVIPIGREREWPLLLPPPPSPRLRLRRLAFLQYFS
TPRYRRAITTTIHVQPSPSSVMISRSGSDSERVEDGSQKPGWRGAASVVP
MEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf