mRNA_P-littoralis_Contig130.85.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig130.85.1 vs. uniprot
Match: D8LC75_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC75_ECTSI) HSP 1 Score: 248 bits (633), Expect = 1.420e-76 Identity = 164/219 (74.89%), Postives = 177/219 (80.82%), Query Frame = 1
Query: 82 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDEEGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDDEAKEAEATAKLQAAIDQSKSECEERTRKKADKRKRKKQVVKAAISNGAKKNKIAADGTAXXXXXXXXXXXXXXXXXXXXXXXX-FVYIPEADLAAAGGDGGSGFKNDGSFLEMMKRELEKSGTRDEPSASASVGGKAIAAK 735
MGRYTTVQAYSDNNPKLVHVSYDQAKGKD++EGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMD+EA+ AEATAKL AI++ K+ECEERTRKK + K A X XXXXXXXXXXXXXXXXXXX FVYIPEADLA AGGDGGSGFKNDGSFLEMMK+ELEKS + D+PSASA+ GKA+ AK
Sbjct: 1 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDNDEGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDEEAQVAEATAKLHEAIEKGKNECEERTRKKXXXXXXXXXXXXXXXXXXXXQAKTGAXXXXXPSXXXXXXXXXXXXXXXXXXXEDEFVYIPEADLATAGGDGGSGFKNDGSFLEMMKKELEKSESSDKPSASAAGTGKAVVAK 219
BLAST of mRNA_P-littoralis_Contig130.85.1 vs. uniprot
Match: A0A835YZ44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ44_9STRA) HSP 1 Score: 103 bits (257), Expect = 5.320e-22 Identity = 60/111 (54.05%), Postives = 76/111 (68.47%), Query Frame = 1
Query: 82 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDEEGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDDEAKEAEATAKLQAAIDQSKSECEERTRKKADKR 414
MGRYTTVQAYSD+NPK+ VSY+QA ++ A G+L +K D VMGS AGAGSGEFH YRA RRRE+HR+AA++ AK E L+A I+ + +T K+A KR
Sbjct: 1 MGRYTTVQAYSDSNPKVAKVSYEQATQGGEKHTTASGRLQTDKVDNVMGSTAGAGSGEFHMYRAARRREIHRMAAIEAAAKADEERRALEATIEGKNAIEAAKTHKRAAKR 111
BLAST of mRNA_P-littoralis_Contig130.85.1 vs. uniprot
Match: A0A7S2V2K9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2K9_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 7.660e-20 Identity = 57/113 (50.44%), Postives = 75/113 (66.37%), Query Frame = 1
Query: 82 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDD----EEGKA-----GGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDDEAKEAEATAKLQAAIDQSKSECEERT 393
MGRYTTVQ Y+DNNPK+V VSY QA G+D ++G A GK+ V K D VMGS AGAGSG+FH+YRA R RE+ R+ A++ A++ + + Q + Q + CEERT
Sbjct: 1 MGRYTTVQTYTDNNPKVVQVSYAQAVGQDKATRAQDGGAMVEQKSGKVKVPKVDNVMGSTAGAGSGDFHSYRATRMREIKRMEAIEAGARQDDLVEEFQHRLQQKRQSCEERT 113
BLAST of mRNA_P-littoralis_Contig130.85.1 vs. uniprot
Match: A0A6S9D7T2_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9D7T2_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.290e-18 Identity = 79/208 (37.98%), Postives = 97/208 (46.63%), Query Frame = 1
Query: 82 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDEEGKAGGKLVV--EKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDDEAKEAEATAKLQAAIDQSKSECEERTRKKADKRKRKKQVVKAAISNGAKKNKIAADGTAXXXXXXXXXXXXXXXXXXXXXXXXFVYIPEADLAAAGGDGGSG----FKNDGSFLEMMKREL--EKSGT 681
MGRYTTVQAY+DNNP + VSYDQA GK + G V EK D GS AGAGSGEFH YR R REM R+A ++ E K+ + + ++E E +T K+ R R K + + DGT F Y P GD FKNDGSFLEMMK++L E +GT
Sbjct: 1 MGRYTTVQAYADNNPNMRSVSYDQATGKTEPSSSTAGAGAVKPEKVDNPYGSTAGAGSGEFHVYRHARSREMARMAQLEYEEKQQLLHEDFEKRKHEMETEEERKTAKRRKXRMRGKXXXXXXXNMKLGGVGLQEDGTGGENLEGGEEE--------------FEYTPTHRQIENKGDNDDAEKIEFKNDGSFLEMMKKKLAAEAAGT 194
BLAST of mRNA_P-littoralis_Contig130.85.1 vs. uniprot
Match: A0A225X3R8_9STRA (RNA-binding protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X3R8_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 6.100e-17 Identity = 57/126 (45.24%), Postives = 78/126 (61.90%), Query Frame = 1
Query: 82 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDEEGKAGG------KLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDDEAKEAEATAKLQAAIDQSKSECEERTRKKADKRKRKKQVVKA 441
MGRYT+VQ +SD + + V+YD A KD+ A G K V + D V GS AGAGSG+FHTYRA RRREM RVAAM+ K+ +A + +A + E + + +K+A+KR+R+K KA
Sbjct: 1 MGRYTSVQTFSDQDAQGAAVTYDAA-SKDESSAAASGADAKDGKFHVNRVDNVSGSSAGAGSGDFHTYRASRRREMERVAAMEQRYKDNKAQQEFEATRKRKAEEFDAKMQKRAEKRRRRKDRAKA 125
BLAST of mRNA_P-littoralis_Contig130.85.1 vs. uniprot
Match: A0A1V9YR89_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YR89_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 2.900e-15 Identity = 60/135 (44.44%), Postives = 74/135 (54.81%), Query Frame = 1
Query: 82 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDEEGKAGGKLVVEK-----TDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDDEAKEAEATAKLQAAIDQSKSECEERTRKKADKRKRKKQVVKAAISNGAKKNK 471
MGRYTT Q Y+D K+ V YD K K + A EK + V GS AGAGSGEFH YRA RRREM RV AM+ E K+ Q + + E EE+TR+KA KR+RK++ K GA + K
Sbjct: 1 MGRYTTEQTYTDKEAKVGTVPYDVVKDKSETPAVAPADAPKEKFKFNRVENVSGSTAGAGSGEFHMYRAARRREMERVGAMEAEHKKKMEDEAFQEKRKRIQEELEEKTRQKAAKRRRKQENAKIKKMMGATETK 135
BLAST of mRNA_P-littoralis_Contig130.85.1 vs. uniprot
Match: A0A0P1A6J8_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6J8_PLAHL) HSP 1 Score: 83.2 bits (204), Expect = 5.270e-15 Identity = 54/134 (40.30%), Postives = 77/134 (57.46%), Query Frame = 1
Query: 82 MGRYTTVQAYSDNNPKLVHVSYD-QAKGKDDEEGKA---GGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDDEAKEAEATAKLQAAIDQSKSECEERTRKKADKRKRKKQVVKAAISNGAKKNK 471
MG YTT+Q +SD + + V+YD + KD + + GGKLVV + D V GS AGAGSGEFHTYRA RRREM R+A+M+ + K+ +A + + DKRKRK ++ +A + +K +
Sbjct: 1 MGCYTTLQTFSDQDAQGAAVAYDADSNAKDSSDAASNVKGGKLVVNRVDNVSGSSAGAGSGEFHTYRAARRREMDRIASMEQQYKDNKAQQEFE------------------DKRKRKAEIFEAKMQKRTEKRR 116
BLAST of mRNA_P-littoralis_Contig130.85.1 vs. uniprot
Match: A0A067CZD8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CZD8_SAPPC) HSP 1 Score: 80.5 bits (197), Expect = 5.930e-14 Identity = 56/136 (41.18%), Postives = 76/136 (55.88%), Query Frame = 1
Query: 82 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDD----------EEGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDDEAKEAEATAKLQAAIDQSKSECEERTRKKADKRKRKKQVVKAAISNGA 459
MGRYTT Q Y+D + V Y+ K K++ E ++ + + D V GS AGAGSGEFH YRA RRREM RV AM+ E K+ Q ++++E EE+TR+KA KR+RK++ K GA
Sbjct: 1 MGRYTTEQTYTDKAATVGTVPYEVVKEKEEAAPAPAEASKESKESKERFKFNRVDNVAGSTAGAGSGEFHMYRAARRREMERVGAMEAEHKKKMEDLAFQEKRKRAQAELEEKTRQKAAKRRRKQENAKVKKMMGA 136
BLAST of mRNA_P-littoralis_Contig130.85.1 vs. uniprot
Match: A0A7S2HD40_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HD40_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 9.090e-14 Identity = 45/87 (51.72%), Postives = 52/87 (59.77%), Query Frame = 1
Query: 82 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDE----------EGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMD 312
MGRYTTVQAY+DNNP + VSYDQA G+ G G + EK D GS AGAGSGEFH YR R REM R+A ++
Sbjct: 1 MGRYTTVQAYADNNPSMRSVSYDQATGRSSSGVAAAASSSATGPGSGSVKPEKVDNPYGSTAGAGSGEFHVYRHARSREMARMAQLE 87
BLAST of mRNA_P-littoralis_Contig130.85.1 vs. uniprot
Match: G4YMD8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YMD8_PHYSP) HSP 1 Score: 80.1 bits (196), Expect = 9.600e-14 Identity = 55/131 (41.98%), Postives = 71/131 (54.20%), Query Frame = 1
Query: 82 MGRYTTVQAYSDNNPKLVHVSYDQAK------GKDDEEGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDDEAKEAEATAKLQAAIDQSKSECEERTRKKADKRKRKKQVVKAAISNG 456
MGRYTTVQ +SD + K V+Y+ A E K KL + + D V GS AGAGSG+FHTYRA RRREM RV AM+ KE +A + K+A+KR+R+K+ KA +G
Sbjct: 1 MGRYTTVQTFSDQDAKGAAVAYNAASEPAAAPADGANESKDSSKLHINRVDNVSGSSAGAGSGDFHTYRAARRREMERVEAMEQRYKENKAQQEXXXXXXXXXXXXXXXXXKRAEKRRRRKERAKAKALDG 131 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig130.85.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig130.85.1 >prot_P-littoralis_Contig130.85.1 ID=prot_P-littoralis_Contig130.85.1|Name=mRNA_P-littoralis_Contig130.85.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=219bp MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDEEGKAGGKLVVEKTDQVMGSback to top mRNA from alignment at P-littoralis_Contig130:395382..399546+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig130.85.1 ID=mRNA_P-littoralis_Contig130.85.1|Name=mRNA_P-littoralis_Contig130.85.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4165bp|location=Sequence derived from alignment at P-littoralis_Contig130:395382..399546+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig130:395382..399546+ >mRNA_P-littoralis_Contig130.85.1 ID=mRNA_P-littoralis_Contig130.85.1|Name=mRNA_P-littoralis_Contig130.85.1|organism=Pylaiella littoralis U1_48|type=CDS|length=657bp|location=Sequence derived from alignment at P-littoralis_Contig130:395382..399546+ (Pylaiella littoralis U1_48)back to top |