prot_P-littoralis_Contig130.62.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig130.62.1
Unique Nameprot_P-littoralis_Contig130.62.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length44
Homology
BLAST of mRNA_P-littoralis_Contig130.62.1 vs. uniprot
Match: A0A0K8RPM6_IXORI (Putative ubiquitin/40s ribosomal protein s27a fusion (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A0K8RPM6_IXORI)

HSP 1 Score: 65.9 bits (159), Expect = 4.930e-13
Identity = 31/37 (83.78%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    1 PPDQQRLIFAGKQLEDGRTLSDYNIQKVSPVKLLSFS 37
            PPDQQRLIFAGKQLEDGRTLSDYNIQK S + L+ FS
Sbjct:   45 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXFS 81          
BLAST of mRNA_P-littoralis_Contig130.62.1 vs. uniprot
Match: A0A667YNB5_9TELE (Ribosomal protein S27a n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667YNB5_9TELE)

HSP 1 Score: 65.9 bits (159), Expect = 4.930e-13
Identity = 31/41 (75.61%), Postives = 35/41 (85.37%), Query Frame = 0
Query:    1 PPDQQRLIFAGKQLEDGRTLSDYNIQKVSPVKLLSFSQLLS 41
            PPDQQRLIFAGKQLEDGRTLSDYNIQK+   +LL  S +L+
Sbjct:   37 PPDQQRLIFAGKQLEDGRTLSDYNIQKLLHYRLLHISMVLN 77          
BLAST of mRNA_P-littoralis_Contig130.62.1 vs. uniprot
Match: A0A7T8JVH6_CALRO (AGAP002599-PA n=1 Tax=Caligus rogercresseyi TaxID=217165 RepID=A0A7T8JVH6_CALRO)

HSP 1 Score: 65.9 bits (159), Expect = 1.810e-12
Identity = 32/38 (84.21%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    1 PPDQQRLIFAGKQLEDGRTLSDYNIQKVSPVKLLSFSQ 38
            PPDQQRLIFAGKQLEDGRTLSDYNIQK SP  L S S+
Sbjct:  104 PPDQQRLIFAGKQLEDGRTLSDYNIQKESPFILCSDSE 141          
BLAST of mRNA_P-littoralis_Contig130.62.1 vs. uniprot
Match: A0A3P8VG79_CYNSE (Ubiquitin-like domain-containing protein n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8VG79_CYNSE)

HSP 1 Score: 65.5 bits (158), Expect = 2.110e-12
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 PPDQQRLIFAGKQLEDGRTLSDYNIQKVSPVKLL 34
            PPDQQRLIFAGKQLEDGRTLSDYNIQK SP+ L+
Sbjct:   37 PPDQQRLIFAGKQLEDGRTLSDYNIQKESPLHLV 70          
BLAST of mRNA_P-littoralis_Contig130.62.1 vs. uniprot
Match: A0A8C6PM34_NOTFU (Ubiquitin A-52 residue ribosomal protein fusion product 1 n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6PM34_NOTFU)

HSP 1 Score: 63.9 bits (154), Expect = 2.330e-12
Identity = 30/34 (88.24%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 PPDQQRLIFAGKQLEDGRTLSDYNIQKVSPVKLL 34
            PPDQQRLIFAGKQLEDGRTLSDYNIQKV  + LL
Sbjct:   37 PPDQQRLIFAGKQLEDGRTLSDYNIQKVLQIVLL 70          
BLAST of mRNA_P-littoralis_Contig130.62.1 vs. uniprot
Match: A0A4W4EBK4_ELEEL (Ribosomal protein S27a n=2 Tax=Clupeocephala TaxID=186625 RepID=A0A4W4EBK4_ELEEL)

HSP 1 Score: 63.5 bits (153), Expect = 2.990e-12
Identity = 33/39 (84.62%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    1 PPDQQRLIFAGKQLEDGRTLSDYNIQKVSPVKLLSFSQL 39
            PPDQQRLIFAGKQLEDGRTLSDYNIQKV  V L+SF  L
Sbjct:   37 PPDQQRLIFAGKQLEDGRTLSDYNIQKVRNV-LVSFVTL 74          
BLAST of mRNA_P-littoralis_Contig130.62.1 vs. uniprot
Match: A0A6A6GHU4_9PEZI (Ubiquitin family-domain-containing protein n=1 Tax=Elsinoe ampelina TaxID=302913 RepID=A0A6A6GHU4_9PEZI)

HSP 1 Score: 63.5 bits (153), Expect = 3.300e-12
Identity = 29/31 (93.55%), Postives = 30/31 (96.77%), Query Frame = 0
Query:    1 PPDQQRLIFAGKQLEDGRTLSDYNIQKVSPV 31
            PPDQQRLIFAGKQLEDGRTLSDYNIQKVS +
Sbjct:   37 PPDQQRLIFAGKQLEDGRTLSDYNIQKVSGI 67          
BLAST of mRNA_P-littoralis_Contig130.62.1 vs. uniprot
Match: A0A2K6ERW6_PROCO (Ubiquitin-60S ribosomal protein L40 n=2 Tax=Eutheria TaxID=9347 RepID=A0A2K6ERW6_PROCO)

HSP 1 Score: 64.3 bits (155), Expect = 4.350e-12
Identity = 31/43 (72.09%), Postives = 33/43 (76.74%), Query Frame = 0
Query:    1 PPDQQRLIFAGKQLEDGRTLSDYNIQKVSPVKLLSFSQLLSTF 43
            PPDQQRLIF GKQLEDGRTLSDYNIQK S + L S  QL   +
Sbjct:   37 PPDQQRLIFVGKQLEDGRTLSDYNIQKESTLHLPSLRQLAQKY 79          
BLAST of mRNA_P-littoralis_Contig130.62.1 vs. uniprot
Match: A0A669EVP5_ORENI (Ubiquitin-like domain-containing protein n=1 Tax=Oreochromis niloticus TaxID=8128 RepID=A0A669EVP5_ORENI)

HSP 1 Score: 63.9 bits (154), Expect = 4.420e-12
Identity = 29/31 (93.55%), Postives = 30/31 (96.77%), Query Frame = 0
Query:    1 PPDQQRLIFAGKQLEDGRTLSDYNIQKVSPV 31
            PPDQQRLIFAGKQLEDGRTLSDYNIQK SP+
Sbjct:   37 PPDQQRLIFAGKQLEDGRTLSDYNIQKESPL 67          
BLAST of mRNA_P-littoralis_Contig130.62.1 vs. uniprot
Match: G4UJ36_NEUT9 (Ubiquitin-domain-containing protein (Fragment) n=1 Tax=Neurospora tetrasperma (strain FGSC 2509 / P0656) TaxID=510952 RepID=G4UJ36_NEUT9)

HSP 1 Score: 63.2 bits (152), Expect = 4.460e-12
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0
Query:    1 PPDQQRLIFAGKQLEDGRTLSDYNIQKVS 29
            PPDQQRLIFAGKQLEDGRTLSDYNIQKVS
Sbjct:   34 PPDQQRLIFAGKQLEDGRTLSDYNIQKVS 62          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig130.62.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0K8RPM6_IXORI4.930e-1383.78Putative ubiquitin/40s ribosomal protein s27a fusi... [more]
A0A667YNB5_9TELE4.930e-1375.61Ribosomal protein S27a n=1 Tax=Myripristis murdjan... [more]
A0A7T8JVH6_CALRO1.810e-1284.21AGAP002599-PA n=1 Tax=Caligus rogercresseyi TaxID=... [more]
A0A3P8VG79_CYNSE2.110e-1288.24Ubiquitin-like domain-containing protein n=1 Tax=C... [more]
A0A8C6PM34_NOTFU2.330e-1288.24Ubiquitin A-52 residue ribosomal protein fusion pr... [more]
A0A4W4EBK4_ELEEL2.990e-1284.62Ribosomal protein S27a n=2 Tax=Clupeocephala TaxID... [more]
A0A6A6GHU4_9PEZI3.300e-1293.55Ubiquitin family-domain-containing protein n=1 Tax... [more]
A0A2K6ERW6_PROCO4.350e-1272.09Ubiquitin-60S ribosomal protein L40 n=2 Tax=Euther... [more]
A0A669EVP5_ORENI4.420e-1293.55Ubiquitin-like domain-containing protein n=1 Tax=O... [more]
G4UJ36_NEUT94.460e-12100.00Ubiquitin-domain-containing protein (Fragment) n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin-like domainPFAMPF00240ubiquitincoord: 1..33
e-value: 1.4E-11
score: 44.0
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 1..34
score: 14.05523
NoneNo IPR availableGENE3D3.10.20.90coord: 1..38
e-value: 5.2E-16
score: 60.3
NoneNo IPR availablePANTHERPTHR10666:SF238GH17761Pcoord: 1..32
NoneNo IPR availablePANTHERPTHR10666UBIQUITINcoord: 1..32
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig130contigP-littoralis_Contig130:280277..280408 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig130.62.1mRNA_P-littoralis_Contig130.62.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig130 279958..280408 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig130.62.1 ID=prot_P-littoralis_Contig130.62.1|Name=mRNA_P-littoralis_Contig130.62.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=44bp
PPDQQRLIFAGKQLEDGRTLSDYNIQKVSPVKLLSFSQLLSTF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin-like_dom
IPR029071Ubiquitin-like_domsf