prot_P-littoralis_Contig130.61.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig130.61.1
Unique Nameprot_P-littoralis_Contig130.61.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length165
Homology
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BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Match: A0A068Y074_ECHMU (Polyubiquitin n=2 Tax=Echinococcus TaxID=6209 RepID=A0A068Y074_ECHMU)

HSP 1 Score: 183 bits (465), Expect = 1.540e-56
Identity = 107/158 (67.72%), Postives = 116/158 (73.42%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRTRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVDSW----RTAAPFRTTTSKRSRPSTWCCACAAGNRFGQYLSVA 154
            MQIFVKTLTGKTITL+VEPSD+I+ VK KIQDKEGIPPDQQRLIFAGK                       LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+V+       TAAPF TTT +RSR  TWC AC A N F  Y+++A
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQ----------------------LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENTAAPFPTTTFRRSRLFTWCFACVAVNLF--YVAIA 134
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BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Match: A0A446V8L9_TRITD (Ubiquitin-like domain-containing protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446V8L9_TRITD)

HSP 1 Score: 170 bits (430), Expect = 2.650e-51
Identity = 103/174 (59.20%), Postives = 108/174 (62.07%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRTRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVDS----------------------------WRTAAPFRTTTSKRSRPSTWCCACAAGNR 146
            MQIFVKTLTGKTITL+VE SDTID VK KIQDKEGIPPDQQRLIFAGK                       LEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+V+S                            WR A P  TTTS+RS PST  C C    R
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ----------------------LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDKPRSRTRRAFPLTSSVSSLLASSWRMAEPSLTTTSRRSPPSTLSCVCVVACR 152
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BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Match: UPI0007045201 (polyubiquitin-B n=1 Tax=Myotis brandtii TaxID=109478 RepID=UPI0007045201)

HSP 1 Score: 168 bits (425), Expect = 1.260e-50
Identity = 100/167 (59.88%), Postives = 107/167 (64.07%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRTRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVD------------------------------SWRTAAPFRTTTSKRSRPSTW 137
            MQIFVKTLTGKTITL+VEPSDTI+ VK KIQDKEGIPPDQQRLIFAGK                       LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+V+                              SW+ AA F TTTS++S P TW
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ----------------------LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIEDVKPRSRIRKASPLTSRGSSLLASSWKMAALFLTTTSRKSPPCTW 145
[Close]
BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Match: A0A6S8BTP7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8BTP7_9STRA)

HSP 1 Score: 164 bits (415), Expect = 1.300e-49
Identity = 91/116 (78.45%), Postives = 92/116 (79.31%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRTRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVD 116
            MQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGK                       LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDV+
Sbjct:   17 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQ----------------------LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVE 110
[Close]
BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Match: A0A3P8TC92_AMPPE (Ubiquitin B n=1 Tax=Amphiprion percula TaxID=161767 RepID=A0A3P8TC92_AMPPE)

HSP 1 Score: 169 bits (429), Expect = 1.440e-49
Identity = 100/145 (68.97%), Postives = 105/145 (72.41%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRTRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVDSWRT------AAPFRTTTSKRSRPSTWCC 139
            MQIFVKTLTGKTITL+VEPSDTI+ VK KIQDKEGIPPDQQRLIFAGK                       LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+V+   T      AAP  TT S+RS PST  C
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ----------------------LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKMAAPSLTTISRRSPPSTLSC 275
[Close]
BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Match: F0YA14_AURAN (Ubiquitin n=2 Tax=Sar TaxID=2698737 RepID=F0YA14_AURAN)

HSP 1 Score: 164 bits (415), Expect = 4.870e-49
Identity = 91/116 (78.45%), Postives = 92/116 (79.31%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRTRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVD 116
            MQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGK                       LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDV+
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQ----------------------LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVE 94
[Close]
BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Match: A0A6H5K2A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A1_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 6.250e-49
Identity = 92/116 (79.31%), Postives = 93/116 (80.17%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRTRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVD 116
            MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGK                       LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDV+
Sbjct:   78 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQ----------------------LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVE 171
[Close]
BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Match: A0A6I9KT72_PERMB (ubiquitin-like n=3 Tax=Cricetidae TaxID=337677 RepID=A0A6I9KT72_PERMB)

HSP 1 Score: 162 bits (410), Expect = 1.160e-48
Identity = 97/148 (65.54%), Postives = 103/148 (69.59%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRTRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVDSWRT-------AAPFRTTTSKRSRPSTWCCAC 141
            MQIFVKTLTGKTITL+VEPSDTI+ VK KIQDKEGIPPDQQRLIFAGK                       LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+V+   T          F TT S++S P    CAC
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ----------------------LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSATKKVKQEDGRTFLTTVSRKSTP----CAC 122
[Close]
BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Match: A0A3Q0D8R3_MESAU (polyubiquitin-C n=2 Tax=Mesocricetus auratus TaxID=10036 RepID=A0A3Q0D8R3_MESAU)

HSP 1 Score: 162 bits (410), Expect = 1.200e-48
Identity = 97/149 (65.10%), Postives = 103/149 (69.13%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRTRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVDSWRTAAP--------FRTTTSKRSRPSTWCCAC 141
            MQIFVKTLTGKTITL+VEPSDTI+ VK KIQDKEGIPPDQQRLIFAGK                       LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+V+   T           F TT S++S P    CAC
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ----------------------LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSNTTKKVKQEDGRTFLTTVSRKSTP----CAC 123
[Close]
BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Match: A0A7R9VQ57_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VQ57_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.870e-48
Identity = 90/116 (77.59%), Postives = 91/116 (78.45%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRTRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVD 116
            MQIFVKTLTGKTITLDVEPSDTID VK KIQDKEGIPPDQQRLIFAGK                       LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDV+
Sbjct:   22 MQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQ----------------------LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVE 115
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A068Y074_ECHMU1.540e-5667.72Polyubiquitin n=2 Tax=Echinococcus TaxID=6209 RepI... [more]
A0A446V8L9_TRITD2.650e-5159.20Ubiquitin-like domain-containing protein n=1 Tax=T... [more]
UPI00070452011.260e-5059.88polyubiquitin-B n=1 Tax=Myotis brandtii TaxID=1094... [more]
A0A6S8BTP7_9STRA1.300e-4978.45Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
A0A3P8TC92_AMPPE1.440e-4968.97Ubiquitin B n=1 Tax=Amphiprion percula TaxID=16176... [more]
F0YA14_AURAN4.870e-4978.45Ubiquitin n=2 Tax=Sar TaxID=2698737 RepID=F0YA14_A... [more]
A0A6H5K2A1_9PHAE6.250e-4979.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6I9KT72_PERMB1.160e-4865.54ubiquitin-like n=3 Tax=Cricetidae TaxID=337677 Rep... [more]
A0A3Q0D8R3_MESAU1.200e-4865.10polyubiquitin-C n=2 Tax=Mesocricetus auratus TaxID... [more]
A0A7R9VQ57_9STRA1.870e-4877.59Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019956Ubiquitin domainPRINTSPR00348UBIQUITINcoord: 11..31
score: 74.16
coord: 32..52
score: 77.09
IPR000626Ubiquitin-like domainSMARTSM00213ubq_7coord: 1..94
e-value: 1.3E-25
score: 101.1
IPR000626Ubiquitin-like domainPFAMPF00240ubiquitincoord: 71..96
e-value: 1.3E-6
score: 28.1
coord: 3..48
e-value: 1.8E-18
score: 66.0
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 1..98
score: 24.442095
NoneNo IPR availableGENE3D3.10.20.90coord: 1..49
e-value: 1.8E-29
score: 103.6
coord: 99..130
e-value: 1.4E-8
score: 36.7
NoneNo IPR availableGENE3D3.10.20.90coord: 66..98
e-value: 2.0E-11
score: 45.5
NoneNo IPR availablePANTHERPTHR10666:SF238GH17761Pcoord: 71..116
NoneNo IPR availablePANTHERPTHR10666UBIQUITINcoord: 1..48
NoneNo IPR availablePANTHERPTHR10666UBIQUITINcoord: 71..116
NoneNo IPR availablePANTHERPTHR10666:SF238GH17761Pcoord: 1..48
NoneNo IPR availableCDDcd01803Ubl_ubiquitincoord: 1..98
e-value: 8.28004E-50
score: 152.984
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..98
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 98..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig130contigP-littoralis_Contig130:278150..279125 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig130.61.1mRNA_P-littoralis_Contig130.61.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig130 277539..279165 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig130.61.1 ID=prot_P-littoralis_Contig130.61.1|Name=mRNA_P-littoralis_Contig130.61.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=165bp
MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSR
TRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQ
IFVKTLTGKTITLDVDSWRTAAPFRTTTSKRSRPSTWCCACAAGNRFGQY
LSVAAPFLSICVPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019956Ubiquitin_dom
IPR000626Ubiquitin-like_dom
IPR029071Ubiquitin-like_domsf