mRNA_P-littoralis_Contig130.61.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Match: A0A6H5K2A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A1_9PHAE) HSP 1 Score: 191 bits (486), Expect = 1.140e-55 Identity = 105/129 (81.40%), Postives = 106/129 (82.17%), Query Frame = 2
Query: 2 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRTRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVD 388
ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGK LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDV+
Sbjct: 65 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQ----------------------LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVE 171
BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Match: A0A6S8BTP7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8BTP7_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.610e-55 Identity = 103/129 (79.84%), Postives = 104/129 (80.62%), Query Frame = 2
Query: 2 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRTRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVD 388
ESTLHLVLR RGGMQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGK LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDV+
Sbjct: 4 ESTLHLVLRRRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQ----------------------LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVE 110
BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Match: A0A7S1UDB6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDB6_9STRA) HSP 1 Score: 189 bits (480), Expect = 5.820e-55 Identity = 104/129 (80.62%), Postives = 105/129 (81.40%), Query Frame = 2
Query: 2 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRTRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVD 388
ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGK LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDV+
Sbjct: 48 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQ----------------------LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVE 154
BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Match: A0A7S4VZT1_9STRA (Hypothetical protein (Fragment) n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VZT1_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.570e-54 Identity = 103/129 (79.84%), Postives = 104/129 (80.62%), Query Frame = 2
Query: 2 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRTRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVD 388
ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VK KIQDKEGIPPDQQRLIFAGK LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDV+
Sbjct: 6 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQ----------------------LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVE 112
BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Match: A0A7S4B1G7_CHRCT (Hypothetical protein (Fragment) n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S4B1G7_CHRCT) HSP 1 Score: 186 bits (472), Expect = 1.940e-54 Identity = 103/129 (79.84%), Postives = 104/129 (80.62%), Query Frame = 2
Query: 2 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRTRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVD 388
ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VK KIQDKEGIPPDQQRLIFAGK LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDV+
Sbjct: 57 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDTVKTKIQDKEGIPPDQQRLIFAGKQ----------------------LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVE 163
BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Match: A0A7S2ESJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ESJ4_9STRA) HSP 1 Score: 187 bits (474), Expect = 2.230e-54 Identity = 103/129 (79.84%), Postives = 104/129 (80.62%), Query Frame = 2
Query: 2 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRTRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVD 388
ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VK KIQDKEGIPPDQQRLIFAGK LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDV+
Sbjct: 22 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQ----------------------LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVE 128
BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Match: H0Z8Y5_TAEGU (Uncharacterized protein n=3 Tax=Taeniopygia guttata TaxID=59729 RepID=H0Z8Y5_TAEGU) HSP 1 Score: 193 bits (491), Expect = 3.060e-54 Identity = 115/189 (60.85%), Postives = 123/189 (65.08%), Query Frame = 2
Query: 2 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRTRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVD-----------------------------SWRTAAPFRTTTSKRSRPSTWCCACAAGNRF 481
ESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSDTI+ VK KIQDKEGIPPDQQRLIFAGK LEDGRTLSDYNIQKEST HLVLRLRGGMQIFVKTLTGKTITL+V+ SW+ AP TTTS+RS+ TWCCA +F
Sbjct: 216 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ----------------------LEDGRTLSDYNIQKEST-HLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGSWKMGAPCPTTTSRRSQLCTWCCASGVAVKF 381
BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Match: UBIQP_PHYIN (Polyubiquitin n=16 Tax=Eukaryota TaxID=2759 RepID=UBIQP_PHYIN) HSP 1 Score: 187 bits (476), Expect = 3.430e-54 Identity = 103/129 (79.84%), Postives = 105/129 (81.40%), Query Frame = 2
Query: 2 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRTRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVD 388
ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSD+ID VKQKIQDKEGIPPDQQRLIFAGK LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDV+
Sbjct: 64 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQ----------------------LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVE 170
BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Match: A0A7R9U6E0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6E0_9STRA) HSP 1 Score: 185 bits (470), Expect = 4.990e-54 Identity = 102/129 (79.07%), Postives = 104/129 (80.62%), Query Frame = 2
Query: 2 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRTRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVD 388
ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTI+ VK KIQDKEGIPPDQQRLIFAGK LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDV+
Sbjct: 34 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQ----------------------LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVE 140
BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Match: A0A7S3XFR2_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3XFR2_9CHLO) HSP 1 Score: 185 bits (470), Expect = 5.150e-54 Identity = 102/128 (79.69%), Postives = 104/128 (81.25%), Query Frame = 2
Query: 2 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRTRRASLRTSSASSSPASSWRTLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDV 385
ESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSD+ID VKQKIQDKEGIPPDQQRLIFAGK LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDV
Sbjct: 15 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQ----------------------LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDV 120 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig130.61.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig130.61.1 >prot_P-littoralis_Contig130.61.1 ID=prot_P-littoralis_Contig130.61.1|Name=mRNA_P-littoralis_Contig130.61.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=165bp MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKSRback to top mRNA from alignment at P-littoralis_Contig130:277539..279165- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig130.61.1 ID=mRNA_P-littoralis_Contig130.61.1|Name=mRNA_P-littoralis_Contig130.61.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1627bp|location=Sequence derived from alignment at P-littoralis_Contig130:277539..279165- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig130:277539..279165- >mRNA_P-littoralis_Contig130.61.1 ID=mRNA_P-littoralis_Contig130.61.1|Name=mRNA_P-littoralis_Contig130.61.1|organism=Pylaiella littoralis U1_48|type=CDS|length=495bp|location=Sequence derived from alignment at P-littoralis_Contig130:277539..279165- (Pylaiella littoralis U1_48)back to top |