prot_P-littoralis_Contig130.55.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig130.55.4
Unique Nameprot_P-littoralis_Contig130.55.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length559
Homology
BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Match: A0A6H5KLF7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLF7_9PHAE)

HSP 1 Score: 261 bits (668), Expect = 1.110e-77
Identity = 218/502 (43.43%), Postives = 257/502 (51.20%), Query Frame = 0
Query:   40 VSVIDVDAASPDAAVARGEKASNTPLQASAGKPAWDPFSSNSARVDAREDAFARLRQGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSWDPFASTADGKENRENAFSKLLAAPCQQHSSHKGRSLVGGGGSSKRAKPSAPTAM--AAGLGGT----ASEAGAVTRFCECPVCGKRVIIELCSKHLDTECGGPDV------DAASTPVPALDKPRPLG-PLPPARFTSASSLLMVSDAPSPCQQPASGIPVRSFGSPVGGQKGTGEDSRALSPSTSALPATDA--SDGPRKTADRSSAGAEGESDAFRRAAGSPLASAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEARGMTTCPVCGKQVHADRCSWHLDNDCAGVNPAPAPLPSCEGKSAGGVGVGQVKEGVAEGRG--ADGGDGVPKKDAGGDTAGGMNALVAELTCPVCLCVFEDVHSLPCSHRFCLECIMGCFKSSKRQECPLCKV 524
            VSV+D +AA     V RG+     P   SA K AWDPF S     D REDAFARL   A                              SSWDPFAST DGK                     KGRS   G  S+KR +P+  + +  AA  GG     A  A A+TRFCECPVCGKRV+IE+CSKHLDTEC G D       + A +P+ A  + R    P+PPA  T   S L        C+   +  P+         ++G G+DSRA    T+A  A DA    G + + D +S+ A   +  F   A SP                     XXXXXXXXXXXXXXXXXX           A A  MT CPVCGKQ+ AD CS HLD DC+GV P+   L              +V++ V  G G  AD G  VPKKD G + AGG+NAL AELTCP+CLCVFED HSLPCSHRFCLECI+GCFKSSKRQECPLCK+
Sbjct:    4 VSVVD-EAAPSSTCVTRGQG----PAPGSAEKEAWDPFGS-----DCREDAFARLLSAA--------NRPAGSSTTTASTSQPAAGPASSSWDPFASTGDGKXXXXXXXXXXXXXXXXXXXXSKGRS---GPSSAKRKRPAVGSTLLSAAAAGGARAGGAGNAEALTRFCECPVCGKRVLIEMCSKHLDTECNGLDATPPAATETAKSPLSAATESRGASEPIPPA--TPPPSALAAGS----CRSVLASPPL---------EEGKGDDSRAR---TAARVAEDAPRGQGQQPSGDAASSSARAAASTFPAPAASPA------------------FEXXXXXXXXXXXXXXXXXXSRARKLGRKRVAAAEAMTACPVCGKQIQADLCSLHLDTDCSGVTPSGGGLKE------------EVRDEVGSGNGGEADSGKAVPKKDVGSEAAGGLNALAAELTCPICLCVFEDAHSLPCSHRFCLECILGCFKSSKRQECPLCKI 436          
BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Match: D8LC67_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC67_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 4.980e-44
Identity = 80/131 (61.07%), Postives = 91/131 (69.47%), Query Frame = 0
Query:  396 MTTCPVCGKQVHADRCSWHLDNDCAGVNPAPAPLPSCEGKSAGGVGVGQVKEGVAEGRG--ADGGDGVPKKDAGGDTAGGMNALVAELTCPVCLCVFEDVHSLPCSHRFCLECIMGCFKSSKRQECPLCKV 524
            MTTCPVCG+QV AD CS HLD DC+G                      +V++ V  G G  AD G  VPK+D G + AGG+NAL AELTCP+CLCVFED HSLPCSHRFCLECI+GCFKSSKRQECPLCK+
Sbjct:    1 MTTCPVCGEQVQADLCSLHLDTDCSGGGRKE-----------------EVRDEVGSGNGGEADSGKTVPKRDTGSEAAGGLNALAAELTCPICLCVFEDAHSLPCSHRFCLECILGCFKSSKRQECPLCKI 114          
BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Match: UPI0012EDCFD0 (E3 ubiquitin-protein ligase TRIM21-like n=1 Tax=Anarrhichthys ocellatus TaxID=433405 RepID=UPI0012EDCFD0)

HSP 1 Score: 60.8 bits (146), Expect = 4.400e-6
Identity = 28/75 (37.33%), Postives = 41/75 (54.67%), Query Frame = 0
Query:  480 ELTCPVCLCVFEDVHSLPCSHRFCLECIMGCFKSSKRQECPLCKVSEGCKYDRAVSAVLLVPIYSFSFATGSRPR 554
            +LTC +CL VF D  +LPC H FC +CI     S+ + +CPLCK     KY   V+ ++   +  +  + G R R
Sbjct:   12 QLTCCICLEVFNDPVTLPCGHNFCKKCITHHLSSNSQHQCPLCKERVDRKYKLRVNTIIAEMVLMYRMSAGRRDR 86          
BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Match: A0A8J5XEH0_DIALT (RING-type domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XEH0_DIALT)

HSP 1 Score: 60.8 bits (146), Expect = 4.990e-6
Identity = 24/50 (48.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:  474 MNALVAELTCPVCLCVFEDVHSLPCSHRFCLECIMGCFKSSKRQECPLCK 523
            +  L AEL C +CL  F+D HSLPC H FCL CI+    +++  +CPLC+
Sbjct:  485 LACLEAELCCQICLATFDDPHSLPCQHTFCLSCIISHMVATRVNDCPLCR 534          
BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Match: A0A803VWR5_FICAL (RING-type domain-containing protein n=1 Tax=Ficedula albicollis TaxID=59894 RepID=A0A803VWR5_FICAL)

HSP 1 Score: 53.5 bits (127), Expect = 1.660e-5
Identity = 27/62 (43.55%), Postives = 38/62 (61.29%), Query Frame = 0
Query:  468 GDTAGGMNALVAELTCPVCLCVFEDVHSLPCSHRFCLEC---IMGCFKSSKR-QECPLCKVS 525
            G+  GG  +L AELTCP+CL V+++  SL C H FC  C   ++G  +SS+    CP C+ S
Sbjct:    5 GEGCGGPGSLEAELTCPICLSVYQEPVSLGCGHSFCRPCLEEVLGTQQSSQGLSTCPTCRAS 66          
BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Match: UPI001BD69A3A (nuclear factor 7, ovary-like n=1 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD69A3A)

HSP 1 Score: 58.5 bits (140), Expect = 2.040e-5
Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 0
Query:  477 LVAELTCPVCLCVFEDVHSLPCSHRFCLECIMGCFKSSKRQECPLCK 523
            L  +L+CPVCL +FED   L CSH FC EC+   +K  K +ECP+CK
Sbjct:    5 LEEDLSCPVCLDIFEDPVILSCSHSFCRECVEKSWKEKKDKECPICK 51          
BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Match: A0A4W3GZY8_CALMI (Uncharacterized protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3GZY8_CALMI)

HSP 1 Score: 55.8 bits (133), Expect = 2.410e-5
Identity = 23/48 (47.92%), Postives = 30/48 (62.50%), Query Frame = 0
Query:  476 ALVAELTCPVCLCVFEDVHSLPCSHRFCLECIMGCFKSSKRQECPLCK 523
            +L  +LTCPVCL +F D  SL C H FC  CI GC++  +   CP C+
Sbjct:    9 SLAEDLTCPVCLDLFNDPVSLVCGHYFCRSCIAGCWERQEAHSCPECR 56          
BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Match: UPI001C3FC9B5 (nuclear factor 7, brain-like n=1 Tax=Callorhinchus milii TaxID=7868 RepID=UPI001C3FC9B5)

HSP 1 Score: 55.8 bits (133), Expect = 4.080e-5
Identity = 23/48 (47.92%), Postives = 30/48 (62.50%), Query Frame = 0
Query:  476 ALVAELTCPVCLCVFEDVHSLPCSHRFCLECIMGCFKSSKRQECPLCK 523
            +L  +LTCPVCL +F D  SL C H FC  CI GC++  +   CP C+
Sbjct:    9 SLAEDLTCPVCLDLFNDPVSLVCGHYFCRSCIAGCWERQETHSCPECR 56          
BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Match: A0A8C3RHY7_9PASS (Uncharacterized protein n=2 Tax=Cyanoderma ruficeps TaxID=181631 RepID=A0A8C3RHY7_9PASS)

HSP 1 Score: 57.4 bits (137), Expect = 4.310e-5
Identity = 28/64 (43.75%), Postives = 39/64 (60.94%), Query Frame = 0
Query:  468 GDTAGGMNALVAELTCPVCLCVFEDVHSLPCSHRFCLECI---MGCFKSSKRQE-CPLCKVSEG 527
            G  +GG   L AELTCP+CLC+F+   SL C H FC +CI   +G  ++S+    CP+C+   G
Sbjct:    5 GKGSGGAGGLEAELTCPICLCLFQQPVSLSCGHSFCRQCIEEVLGTQQNSRGPSTCPICRAHLG 68          
BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Match: UPI001BD33D56 (nuclear factor 7, brain-like n=1 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD33D56)

HSP 1 Score: 57.4 bits (137), Expect = 4.590e-5
Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 0
Query:  477 LVAELTCPVCLCVFEDVHSLPCSHRFCLECIMGCFKSSKRQECPLCK 523
            L  +L+CPVCL +FED   L CSH FC EC+   +K  + +ECP+CK
Sbjct:    5 LEEDLSCPVCLDIFEDPVMLSCSHSFCRECVEKSWKEKEDKECPICK 51          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5KLF7_9PHAE1.110e-7743.43RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LC67_ECTSI4.980e-4461.07RING-type domain-containing protein n=1 Tax=Ectoca... [more]
UPI0012EDCFD04.400e-637.33E3 ubiquitin-protein ligase TRIM21-like n=1 Tax=An... [more]
A0A8J5XEH0_DIALT4.990e-648.00RING-type domain-containing protein n=1 Tax=Diacro... [more]
A0A803VWR5_FICAL1.660e-543.55RING-type domain-containing protein n=1 Tax=Ficedu... [more]
UPI001BD69A3A2.040e-553.19nuclear factor 7, ovary-like n=1 Tax=Cheilinus und... [more]
A0A4W3GZY8_CALMI2.410e-547.92Uncharacterized protein n=1 Tax=Callorhinchus mili... [more]
UPI001C3FC9B54.080e-547.92nuclear factor 7, brain-like n=1 Tax=Callorhinchus... [more]
A0A8C3RHY7_9PASS4.310e-543.75Uncharacterized protein n=2 Tax=Cyanoderma ruficep... [more]
UPI001BD33D564.590e-551.06nuclear factor 7, brain-like n=1 Tax=Cheilinus und... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006642Rad18, zinc finger UBZ4-typeSMARTSM00734c2hc_5coord: 396..420
e-value: 0.11
score: 18.2
coord: 202..226
e-value: 0.1
score: 18.4
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 483..522
e-value: 5.1E-5
score: 32.7
coord: 205..402
e-value: 10.0
score: 2.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 483..523
score: 11.943417
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 483..522
e-value: 4.1E-7
score: 29.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 463..539
e-value: 2.6E-13
score: 52.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..278
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 443..467
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..335
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 363..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 295..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..179
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 479..526
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 498..507

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig130contigP-littoralis_Contig130:271388..274047 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig130.55.4mRNA_P-littoralis_Contig130.55.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig130 271262..274674 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig130.55.4 ID=prot_P-littoralis_Contig130.55.4|Name=mRNA_P-littoralis_Contig130.55.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=559bp
MPGGLASWLDDESNSRKSKLPSTATAAHDVHRERKASQVVSVIDVDAASP
DAAVARGEKASNTPLQASAGKPAWDPFSSNSARVDAREDAFARLRQGAAA
AKQQPTTPTTTASTPSPPTWRRESPPSSSSWDPFASTADGKENRENAFSK
LLAAPCQQHSSHKGRSLVGGGGSSKRAKPSAPTAMAAGLGGTASEAGAVT
RFCECPVCGKRVIIELCSKHLDTECGGPDVDAASTPVPALDKPRPLGPLP
PARFTSASSLLMVSDAPSPCQQPASGIPVRSFGSPVGGQKGTGEDSRALS
PSTSALPATDASDGPRKTADRSSAGAEGESDAFRRAAGSPLASAAVTAAP
AAAAAAAAVKPAASTRKRTARGAPSSSRQGGKRAAATAAAAEARGMTTCP
VCGKQVHADRCSWHLDNDCAGVNPAPAPLPSCEGKSAGGVGVGQVKEGVA
EGRGADGGDGVPKKDAGGDTAGGMNALVAELTCPVCLCVFEDVHSLPCSH
RFCLECIMGCFKSSKRQECPLCKVSEGCKYDRAVSAVLLVPIYSFSFATG
SRPRAHRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006642Rad18_UBZ4
IPR001841Znf_RING
IPR018957Znf_C3HC4_RING-type
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS