mRNA_P-littoralis_Contig130.55.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig130.55.4
Unique Name	mRNA_P-littoralis_Contig130.55.4
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Match: A0A6H5KLF7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLF7_9PHAE)

HSP 1 Score: 261 bits (668), Expect = 2.710e-75
Identity = 218/502 (43.43%), Postives = 257/502 (51.20%), Query Frame = 1

Query:  244 VSVIDVDAASPDAAVARGEKASNTPLQASAGKPAWDPFSSNSARVDAREDAFARLRQGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSWDPFASTADGKENRENAFSKLLAAPCQQHSSHKGRSLVGGGGSSKRAKPSAPTAM--AAGLGGT----ASEAGAVTRFCECPVCGKRVIIELCSKHLDTECGGPDV------DAASTPVPALDKPRPLG-PLPPARFTSASSLLMVSDAPSPCQQPASGIPVRSFGSPVGGQKGTGEDSRALSPSTSALPATDA--SDGPRKTADRSSAGAEGESDAFRRAAGSPLASAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEARGMTTCPVCGKQVHADRCSWHLDNDCAGVNPAPAPLPSCEGKSAGGVGVGQVKEGVAEGRG--ADGGDGVPKKDAGGDTAGGMNALVAELTCPVCLCVFEDVHSLPCSHRFCLECIMGCFKSSKRQECPLCKV 1698
            VSV+D +AA     V RG+     P   SA K AWDPF S     D REDAFARL   A                              SSWDPFAST DGK                     KGRS   G  S+KR +P+  + +  AA  GG     A  A A+TRFCECPVCGKRV+IE+CSKHLDTEC G D       + A +P+ A  + R    P+PPA  T   S L        C+   +  P+         ++G G+DSRA    T+A  A DA    G + + D +S+ A   +  F   A SP                     XXXXXXXXXXXXXXXXXX           A A  MT CPVCGKQ+ AD CS HLD DC+GV P+   L              +V++ V  G G  AD G  VPKKD G + AGG+NAL AELTCP+CLCVFED HSLPCSHRFCLECI+GCFKSSKRQECPLCK+
Sbjct:    4 VSVVD-EAAPSSTCVTRGQG----PAPGSAEKEAWDPFGS-----DCREDAFARLLSAA--------NRPAGSSTTTASTSQPAAGPASSSWDPFASTGDGKXXXXXXXXXXXXXXXXXXXXSKGRS---GPSSAKRKRPAVGSTLLSAAAAGGARAGGAGNAEALTRFCECPVCGKRVLIEMCSKHLDTECNGLDATPPAATETAKSPLSAATESRGASEPIPPA--TPPPSALAAGS----CRSVLASPPL---------EEGKGDDSRAR---TAARVAEDAPRGQGQQPSGDAASSSARAAASTFPAPAASPA------------------FEXXXXXXXXXXXXXXXXXXSRARKLGRKRVAAAEAMTACPVCGKQIQADLCSLHLDTDCSGVTPSGGGLKE------------EVRDEVGSGNGGEADSGKAVPKKDVGSEAAGGLNALAAELTCPICLCVFEDAHSLPCSHRFCLECILGCFKSSKRQECPLCKI 436

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BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Match: D8LC67_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC67_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 5.520e-43
Identity = 80/131 (61.07%), Postives = 91/131 (69.47%), Query Frame = 1

Query: 1312 MTTCPVCGKQVHADRCSWHLDNDCAGVNPAPAPLPSCEGKSAGGVGVGQVKEGVAEGRG--ADGGDGVPKKDAGGDTAGGMNALVAELTCPVCLCVFEDVHSLPCSHRFCLECIMGCFKSSKRQECPLCKV 1698
            MTTCPVCG+QV AD CS HLD DC+G                      +V++ V  G G  AD G  VPK+D G + AGG+NAL AELTCP+CLCVFED HSLPCSHRFCLECI+GCFKSSKRQECPLCK+
Sbjct:    1 MTTCPVCGEQVQADLCSLHLDTDCSGGGRKE-----------------EVRDEVGSGNGGEADSGKTVPKRDTGSEAAGGLNALAAELTCPICLCVFEDAHSLPCSHRFCLECILGCFKSSKRQECPLCKI 114

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BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Match: UPI0012EDCFD0 (E3 ubiquitin-protein ligase TRIM21-like n=1 Tax=Anarrhichthys ocellatus TaxID=433405 RepID=UPI0012EDCFD0)

HSP 1 Score: 61.6 bits (148), Expect = 4.490e-6
Identity = 28/75 (37.33%), Postives = 41/75 (54.67%), Query Frame = 1

Query: 1564 ELTCPVCLCVFEDVHSLPCSHRFCLECIMGCFKSSKRQECPLCKVSEGCKYDRAVSAVLLVPIYSFSFATGSRPR 1788
            +LTC +CL VF D  +LPC H FC +CI     S+ + +CPLCK     KY   V+ ++   +  +  + G R R
Sbjct:   12 QLTCCICLEVFNDPVTLPCGHNFCKKCITHHLSSNSQHQCPLCKERVDRKYKLRVNTIIAEMVLMYRMSAGRRDR 86

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BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Match: A0A8J5XEH0_DIALT (RING-type domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XEH0_DIALT)

HSP 1 Score: 60.8 bits (146), Expect = 8.890e-6
Identity = 24/50 (48.00%), Postives = 33/50 (66.00%), Query Frame = 1

Query: 1546 MNALVAELTCPVCLCVFEDVHSLPCSHRFCLECIMGCFKSSKRQECPLCK 1695
            +  L AEL C +CL  F+D HSLPC H FCL CI+    +++  +CPLC+
Sbjct:  485 LACLEAELCCQICLATFDDPHSLPCQHTFCLSCIISHMVATRVNDCPLCR 534

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BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Match: A0A803VWR5_FICAL (RING-type domain-containing protein n=1 Tax=Ficedula albicollis TaxID=59894 RepID=A0A803VWR5_FICAL)

HSP 1 Score: 53.5 bits (127), Expect = 2.460e-5
Identity = 27/62 (43.55%), Postives = 38/62 (61.29%), Query Frame = 1

Query: 1528 GDTAGGMNALVAELTCPVCLCVFEDVHSLPCSHRFCLEC---IMGCFKSSKR-QECPLCKVS 1701
            G+  GG  +L AELTCP+CL V+++  SL C H FC  C   ++G  +SS+    CP C+ S
Sbjct:    5 GEGCGGPGSLEAELTCPICLSVYQEPVSLGCGHSFCRPCLEEVLGTQQSSQGLSTCPTCRAS 66

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BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Match: UPI001BD69A3A (nuclear factor 7, ovary-like n=1 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD69A3A)

HSP 1 Score: 58.5 bits (140), Expect = 3.530e-5
Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 1

Query: 1555 LVAELTCPVCLCVFEDVHSLPCSHRFCLECIMGCFKSSKRQECPLCK 1695
            L  +L+CPVCL +FED   L CSH FC EC+   +K  K +ECP+CK
Sbjct:    5 LEEDLSCPVCLDIFEDPVILSCSHSFCRECVEKSWKEKKDKECPICK 51

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BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Match: A0A4W3GZY8_CALMI (Uncharacterized protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3GZY8_CALMI)

HSP 1 Score: 55.8 bits (133), Expect = 3.770e-5
Identity = 23/48 (47.92%), Postives = 30/48 (62.50%), Query Frame = 1

Query: 1552 ALVAELTCPVCLCVFEDVHSLPCSHRFCLECIMGCFKSSKRQECPLCK 1695
            +L  +LTCPVCL +F D  SL C H FC  CI GC++  +   CP C+
Sbjct:    9 SLAEDLTCPVCLDLFNDPVSLVCGHYFCRSCIAGCWERQEAHSCPECR 56

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BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Match: UPI001C3FC9B5 (nuclear factor 7, brain-like n=1 Tax=Callorhinchus milii TaxID=7868 RepID=UPI001C3FC9B5)

HSP 1 Score: 55.8 bits (133), Expect = 6.510e-5
Identity = 23/48 (47.92%), Postives = 30/48 (62.50%), Query Frame = 1

Query: 1552 ALVAELTCPVCLCVFEDVHSLPCSHRFCLECIMGCFKSSKRQECPLCK 1695
            +L  +LTCPVCL +F D  SL C H FC  CI GC++  +   CP C+
Sbjct:    9 SLAEDLTCPVCLDLFNDPVSLVCGHYFCRSCIAGCWERQETHSCPECR 56

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BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Match: A0A8C3RHY7_9PASS (Uncharacterized protein n=2 Tax=Cyanoderma ruficeps TaxID=181631 RepID=A0A8C3RHY7_9PASS)

HSP 1 Score: 57.4 bits (137), Expect = 7.380e-5
Identity = 28/64 (43.75%), Postives = 39/64 (60.94%), Query Frame = 1

Query: 1528 GDTAGGMNALVAELTCPVCLCVFEDVHSLPCSHRFCLECI---MGCFKSSKRQE-CPLCKVSEG 1707
            G  +GG   L AELTCP+CLC+F+   SL C H FC +CI   +G  ++S+    CP+C+   G
Sbjct:    5 GKGSGGAGGLEAELTCPICLCLFQQPVSLSCGHSFCRQCIEEVLGTQQNSRGPSTCPICRAHLG 68

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BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Match: UPI001BD33D56 (nuclear factor 7, brain-like n=1 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD33D56)

HSP 1 Score: 57.4 bits (137), Expect = 7.900e-5
Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 1

Query: 1555 LVAELTCPVCLCVFEDVHSLPCSHRFCLECIMGCFKSSKRQECPLCK 1695
            L  +L+CPVCL +FED   L CSH FC EC+   +K  + +ECP+CK
Sbjct:    5 LEEDLSCPVCLDIFEDPVMLSCSHSFCRECVEKSWKEKEDKECPICK 51

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot

BLAST of mRNA_P-littoralis_Contig130.55.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11


Match Name	E-value	Identity	Description
A0A6H5KLF7_9PHAE	2.710e-75	43.43	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]
D8LC67_ECTSI	5.520e-43	61.07	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]
UPI0012EDCFD0	4.490e-6	37.33	E3 ubiquitin-protein ligase TRIM21-like n=1 Tax=An...	[more]
A0A8J5XEH0_DIALT	8.890e-6	48.00	RING-type domain-containing protein n=1 Tax=Diacro...	[more]
A0A803VWR5_FICAL	2.460e-5	43.55	RING-type domain-containing protein n=1 Tax=Ficedu...	[more]
UPI001BD69A3A	3.530e-5	53.19	nuclear factor 7, ovary-like n=1 Tax=Cheilinus und...	[more]
A0A4W3GZY8_CALMI	3.770e-5	47.92	Uncharacterized protein n=1 Tax=Callorhinchus mili...	[more]
UPI001C3FC9B5	6.510e-5	47.92	nuclear factor 7, brain-like n=1 Tax=Callorhinchus...	[more]
A0A8C3RHY7_9PASS	7.380e-5	43.75	Uncharacterized protein n=2 Tax=Cyanoderma ruficep...	[more]
UPI001BD33D56	7.900e-5	51.06	nuclear factor 7, brain-like n=1 Tax=Cheilinus und...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig130	contig	P-littoralis_Contig130:271262..274674 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2903.EOD19848
Model size	2430
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	other localisation
Exons	3
Evalue	1.53e-07
EggNOG OGs	KOG2177@1\|root,KOG2177@2759\|Eukaryota
Ec32 ortholog description	Zinc finger, RING/FYVE/PHD-type
Ec32 ortholog	Ec-20_004640.1
Description	zinc ion binding
Cds size	1677
COG category	O

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789590.7083921-UTR-P-littoralis_Contig130:271261..271387	1680789590.7083921-UTR-P-littoralis_Contig130:271261..271387	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig130 271262..271387 +
1680789590.749656-UTR-P-littoralis_Contig130:274047..274674	1680789590.749656-UTR-P-littoralis_Contig130:274047..274674	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig130 274048..274674 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789590.7209158-CDS-P-littoralis_Contig130:271387..272020	1680789590.7209158-CDS-P-littoralis_Contig130:271387..272020	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig130 271388..272020 +
1680789590.7290857-CDS-P-littoralis_Contig130:272558..273382	1680789590.7290857-CDS-P-littoralis_Contig130:272558..273382	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig130 272559..273382 +
1680789590.737257-CDS-P-littoralis_Contig130:273827..274047	1680789590.737257-CDS-P-littoralis_Contig130:273827..274047	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig130 273828..274047 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig130.55.4	prot_P-littoralis_Contig130.55.4	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig130 271388..274047 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig130:271262..274674+
coding sequence from alignment at P-littoralis_Contig130:271262..274674+

protein sequence of mRNA_P-littoralis_Contig130.55.4

>prot_P-littoralis_Contig130.55.4 ID=prot_P-littoralis_Contig130.55.4|Name=mRNA_P-littoralis_Contig130.55.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=559bp
MPGGLASWLDDESNSRKSKLPSTATAAHDVHRERKASQVVSVIDVDAASP
DAAVARGEKASNTPLQASAGKPAWDPFSSNSARVDAREDAFARLRQGAAA
AKQQPTTPTTTASTPSPPTWRRESPPSSSSWDPFASTADGKENRENAFSK
LLAAPCQQHSSHKGRSLVGGGGSSKRAKPSAPTAMAAGLGGTASEAGAVT
RFCECPVCGKRVIIELCSKHLDTECGGPDVDAASTPVPALDKPRPLGPLP
PARFTSASSLLMVSDAPSPCQQPASGIPVRSFGSPVGGQKGTGEDSRALS
PSTSALPATDASDGPRKTADRSSAGAEGESDAFRRAAGSPLASAAVTAAP
AAAAAAAAVKPAASTRKRTARGAPSSSRQGGKRAAATAAAAEARGMTTCP
VCGKQVHADRCSWHLDNDCAGVNPAPAPLPSCEGKSAGGVGVGQVKEGVA
EGRGADGGDGVPKKDAGGDTAGGMNALVAELTCPVCLCVFEDVHSLPCSH
RFCLECIMGCFKSSKRQECPLCKVSEGCKYDRAVSAVLLVPIYSFSFATG
SRPRAHRV*

mRNA from alignment at P-littoralis_Contig130:271262..274674+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig130.55.4 ID=mRNA_P-littoralis_Contig130.55.4|Name=mRNA_P-littoralis_Contig130.55.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=3413bp|location=Sequence derived from alignment at P-littoralis_Contig130:271262..274674+ (Pylaiella littoralis U1_48)
GCTCTGTCCATGTCCCCCTTCTCTCTCTCCTCCTCTCCTCTACCGCATCC
TCTCTGACAGGTGCCCTGCTCACCCGCCAGTACCGCCGGCGCCAGACATT
AACCTGCCGCACTACTGCATCCTGTAATGCCTGGTGGGCTGGCTTCTTGG
CTGGATGACGAGTCTAACTCTAGGAAAAGCAAACTGCCATCCACTGCAAC
AGCAGCTCATGATGTTCACCGTGAGAGAAAAGCTTCACAGGTCGTATCGG
TCATCGACGTGGATGCCGCATCGCCGGACGCAGCAGTTGCAAGGGGAGAG
AAAGCAAGCAACACCCCCTTACAAGCCTCTGCTGGAAAGCCAGCTTGGGA
TCCCTTCTCGAGTAATAGCGCTCGCGTGGATGCTCGGGAGGACGCGTTTG
CCCGGCTCCGGCAAGGGGCCGCAGCAGCTAAACAACAGCCAACGACACCA
ACGACAACTGCCTCCACCCCATCTCCGCCTACTTGGCGGCGTGAATCGCC
TCCGTCTTCTTCGTCTTGGGACCCGTTTGCGAGCACAGCCGACGGAAAGG
AGAATCGCGAGAACGCCTTTTCGAAGCTGCTCGCGGCTCCTTGTCAGCAG
CACAGCTCGCATAAGGGGAGGAGTTTAGTCGGCGGCGGCGGCTCTAGCAA
GAGGGCCAAGCCGAGTGCTCCCACTGCTATGGCGGCGGGACTAGGTGGTA
CTGCCTCAGAAGCGGGGGCTGTTACGCGTTTCTGCGAGTGCCCTGTTTGC
GGAAAGAGGGTGAGACTCTTGTAGGTGTTCCGTTTTGTTGCTGCTGTTGT
GCAACATGTGCGACTGCCGATATACTGCAGGAAACGCATAAATTGTTCCA
GCGTCACGTTCCCTTTACGTGATGTTTCAAATTTGTGCACGCGTGTTCCA
AAGCTGGTGTTGTCGGCGCTCTCTCCTGCTCTGTTACACCTTGCACCTGT
ACGGCCCTTCAGTTGCTGTAATGCGTGCTACATGAGCAGCAATACCGATG
GGTTTTGTCTGCTCTAATTTCGTAATAAAAAGTAGCGTCATTGTTCCGTG
TGACGAGAAATGCACTGCGCTCGGCATCAGGAAGCCGAGGGGGTACTACC
GGTATGCTATATAAACAAGGCAACGGCAGTACGGTATGATACACCTTTGC
TGCAAGCTCGGCTGTTTAAGGATCCGAAGAAGTAGCCTACCCCACCCGAC
GCGTGGTTTCATGATACTGCTCTGTACAGAGGAGTACCTGCTGTTTGCGT
CCAGCTCTCTCAAGATGGTAAGACACCTGTTCTTCCCATGTGCGCAGGTT
ATCATCGAGCTCTGCAGTAAGCATCTCGACACGGAGTGCGGTGGACCGGA
TGTGGACGCGGCAAGTACGCCTGTCCCTGCCCTTGACAAGCCGAGACCAT
TAGGACCCTTGCCCCCAGCAAGGTTCACATCGGCATCCTCATTGCTTATG
GTTTCCGATGCACCTTCACCCTGTCAGCAGCCCGCGTCAGGCATTCCAGT
CCGGTCATTCGGATCGCCCGTGGGCGGTCAAAAAGGAACGGGTGAAGATA
GCCGCGCCCTGTCGCCGTCAACGTCCGCACTTCCTGCGACAGACGCCTCC
GATGGGCCGAGAAAAACGGCGGATAGAAGCAGCGCTGGCGCGGAAGGAGA
GTCGGATGCTTTCAGGAGAGCGGCCGGGAGTCCGTTGGCTTCTGCCGCCG
TTACTGCCGCTCCTGCTGCTGCTGCTGCTGCTGCTGCAGTCAAGCCGGCT
GCGTCGACGCGAAAGCGAACTGCGCGCGGCGCGCCTTCCTCCTCCCGACA
AGGGGGGAAAAGAGCAGCAGCGACGGCAGCAGCAGCGGAAGCGAGAGGGA
TGACTACGTGTCCCGTCTGCGGGAAACAAGTCCATGCGGACCGTTGCAGC
TGGCACCTTGACAATGATTGTGCCGGTGTCAACCCTGCTCCTGCGCCTCT
CCCCAGTTGCGAGGGCAAGAGTGCTGGGGGGGTCGGCGTCGGCCAAGTGA
AGGAGGGGGTGGCAGAGGGAAGGGGAGCGGACGGTGGGGACGGTGTGCCG
AAGAAAGACGCCGGGGGCGACACGGCGGGGGGGATGAACGCGCTTGTCGC
GGAGCTGACTTGTCCTGTCTGGTGAGTGATTGTTGTGGAGTGTGCATACC
CCTTTTTTAGTTTGTACCTGCTCCATCCCGTGTGATTAAAGCTTGAGCGT
TCACCCCGAGCTTCTGCCTGATATCTCAAACATACGAAGTGTCATACCAG
TACCCTACCTGAACGCTTCAGACTTCGAGAAGCGGAGAGTTGACCAAGGC
TTGACCTCCCTTTTTGTTCGCACTGTATTACACGAGGTGTTTGGGCGCTG
CCGGCACTGTCGATACATAGAATAACGACGAAACAGTAGCATGCATGCGT
TGGGAGTTACTGGGTCTGACTTGGGATGGCATTCTTGTCCTTGACAAGTA
ACATTTGGCGATGCGTCGAGCGTCTCGGCGTTTCGACATACAGGTGGAAA
TCGACTCATGCGAAATCTGCCTCTTCTTCTTTGTTGTTGCTCTCCCGCTC
TCGCCCTGCCACACAGCCTGTGCGTGTTCGAGGATGTGCATTCGTTGCCC
TGCAGCCATCGCTTTTGCCTGGAGTGCATCATGGGTTGCTTTAAGTCGAG
TAAGCGTCAGGAGTGCCCGCTGTGCAAAGTGAGTGAGGGCTGCAAATATG
ATAGAGCGGTATCGGCTGTACTCTTGGTACCTATTTATTCGTTTTCTTTT
GCGACGGGAAGTCGTCCGCGTGCGCACCGTGTGTAGGAACTCGTCTTTTA
TGCTTGCCCGTAACAAACAATTGTGGTGGAACCATCGGCGTCGAGACGTT
GATGATGTGTTCCAAACTTGGTTCACACCCGACATACGTCTCGCCTTGTT
CCAGCCAAGTGTGCCCAAGGAGAGAACGCGATCATACAGGAGATTGCTCA
CGTTCTTGGAACGCCGTTGAAAACAGAGCTTTGCTGGAGGTTGGTTTCGT
GTACGTTTCATTGAGTGTTATGGATTCTTGAGATACCCCGCTGCTTCTAC
TTGTCTTGCTTCTCTCCTTGCTTTGTCGCCTGACGCTTTGGCCGAGGTGT
TCACGTATTTTCCTGATCAAGTTGAAGAGTTCGGTTCTCCCCGTGCGTCG
CTGCTGCTGTCGCGAATTGACGCGTCAGCTTTGTCACCACTTGTCACCAA
TTGGCAGTAAGGCTGCTTCTTATGTACGGCGTTTTTTTCCTGTCGACAAT
GACCCATTTCCGATCCAGCATGCCTTCGCGGGAGATTTTTGATCCGCTGT
TCTTGCTGTGTGTGTTCTTAGGTTTGTTGTGGATCCGGTTCCAAAAGACT
GCCACGTAGCAGCGGTAGCAGGGTAGTTGGTTCGCCTTGGCACCGATTTG
TTTTTTCGTTCAC

Coding sequence (CDS) from alignment at P-littoralis_Contig130:271262..274674+

>mRNA_P-littoralis_Contig130.55.4 ID=mRNA_P-littoralis_Contig130.55.4|Name=mRNA_P-littoralis_Contig130.55.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1677bp|location=Sequence derived from alignment at P-littoralis_Contig130:271262..274674+ (Pylaiella littoralis U1_48)
ATGCCTGGTGGGCTGGCTTCTTGGCTGGATGACGAGTCTAACTCTAGGAA
AAGCAAACTGCCATCCACTGCAACAGCAGCTCATGATGTTCACCGTGAGA
GAAAAGCTTCACAGGTCGTATCGGTCATCGACGTGGATGCCGCATCGCCG
GACGCAGCAGTTGCAAGGGGAGAGAAAGCAAGCAACACCCCCTTACAAGC
CTCTGCTGGAAAGCCAGCTTGGGATCCCTTCTCGAGTAATAGCGCTCGCG
TGGATGCTCGGGAGGACGCGTTTGCCCGGCTCCGGCAAGGGGCCGCAGCA
GCTAAACAACAGCCAACGACACCAACGACAACTGCCTCCACCCCATCTCC
GCCTACTTGGCGGCGTGAATCGCCTCCGTCTTCTTCGTCTTGGGACCCGT
TTGCGAGCACAGCCGACGGAAAGGAGAATCGCGAGAACGCCTTTTCGAAG
CTGCTCGCGGCTCCTTGTCAGCAGCACAGCTCGCATAAGGGGAGGAGTTT
AGTCGGCGGCGGCGGCTCTAGCAAGAGGGCCAAGCCGAGTGCTCCCACTG
CTATGGCGGCGGGACTAGGTGGTACTGCCTCAGAAGCGGGGGCTGTTACG
CGTTTCTGCGAGTGCCCTGTTTGCGGAAAGAGGGTTATCATCGAGCTCTG
CAGTAAGCATCTCGACACGGAGTGCGGTGGACCGGATGTGGACGCGGCAA
GTACGCCTGTCCCTGCCCTTGACAAGCCGAGACCATTAGGACCCTTGCCC
CCAGCAAGGTTCACATCGGCATCCTCATTGCTTATGGTTTCCGATGCACC
TTCACCCTGTCAGCAGCCCGCGTCAGGCATTCCAGTCCGGTCATTCGGAT
CGCCCGTGGGCGGTCAAAAAGGAACGGGTGAAGATAGCCGCGCCCTGTCG
CCGTCAACGTCCGCACTTCCTGCGACAGACGCCTCCGATGGGCCGAGAAA
AACGGCGGATAGAAGCAGCGCTGGCGCGGAAGGAGAGTCGGATGCTTTCA
GGAGAGCGGCCGGGAGTCCGTTGGCTTCTGCCGCCGTTACTGCCGCTCCT
GCTGCTGCTGCTGCTGCTGCTGCAGTCAAGCCGGCTGCGTCGACGCGAAA
GCGAACTGCGCGCGGCGCGCCTTCCTCCTCCCGACAAGGGGGGAAAAGAG
CAGCAGCGACGGCAGCAGCAGCGGAAGCGAGAGGGATGACTACGTGTCCC
GTCTGCGGGAAACAAGTCCATGCGGACCGTTGCAGCTGGCACCTTGACAA
TGATTGTGCCGGTGTCAACCCTGCTCCTGCGCCTCTCCCCAGTTGCGAGG
GCAAGAGTGCTGGGGGGGTCGGCGTCGGCCAAGTGAAGGAGGGGGTGGCA
GAGGGAAGGGGAGCGGACGGTGGGGACGGTGTGCCGAAGAAAGACGCCGG
GGGCGACACGGCGGGGGGGATGAACGCGCTTGTCGCGGAGCTGACTTGTC
CTGTCTGCCTGTGCGTGTTCGAGGATGTGCATTCGTTGCCCTGCAGCCAT
CGCTTTTGCCTGGAGTGCATCATGGGTTGCTTTAAGTCGAGTAAGCGTCA
GGAGTGCCCGCTGTGCAAAGTGAGTGAGGGCTGCAAATATGATAGAGCGG
TATCGGCTGTACTCTTGGTACCTATTTATTCGTTTTCTTTTGCGACGGGA
AGTCGTCCGCGTGCGCACCGTGTGTAG