prot_P-littoralis_Contig130.47.1 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig130.47.1 vs. uniprot
Match: D8LC63_ECTSI (U6 snRNA-associated Sm-like protein LSm2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC63_ECTSI) HSP 1 Score: 184 bits (466), Expect = 8.180e-59 Identity = 92/94 (97.87%), Postives = 93/94 (98.94%), Query Frame = 0
Query: 1 MLFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLTEVHVVDAERYPQLGAIKNCFIRGSVVRYIQIPSADVDTELLQDACRKESAQGK 94
MLFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLT+V VVDAERYPQLGAIKNCFIRGSVVRYIQIPSADVDTELLQDACRKESAQGK
Sbjct: 1 MLFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLTDVQVVDAERYPQLGAIKNCFIRGSVVRYIQIPSADVDTELLQDACRKESAQGK 94
BLAST of mRNA_P-littoralis_Contig130.47.1 vs. uniprot
Match: A0A835YRK1_9STRA (U6 snRNA-associated Sm-like protein LSm2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRK1_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.060e-50 Identity = 79/93 (84.95%), Postives = 87/93 (93.55%), Query Frame = 0
Query: 1 MLFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLTEVHVVDAERYPQLGAIKNCFIRGSVVRYIQIPSADVDTELLQDACRKESAQG 93
MLFYSFFKTLVGKE+AVELKNDV+LTGTLHSVDQYLNVKLT V VVD ER+PQLGA+K CFIRGS VRYIQIP+++VDTELLQDACRKE+A G
Sbjct: 1 MLFYSFFKTLVGKEVAVELKNDVSLTGTLHSVDQYLNVKLTGVKVVDEERFPQLGALKGCFIRGSAVRYIQIPASEVDTELLQDACRKENASG 93
BLAST of mRNA_P-littoralis_Contig130.47.1 vs. uniprot
Match: A0A7S3PVB5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVB5_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.080e-47 Identity = 78/94 (82.98%), Postives = 84/94 (89.36%), Query Frame = 0
Query: 1 MLFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLTEVHVVDAERYPQLGAIKNCFIRGSVVRYIQIPSADVDTELLQDACRKESAQGK 94
MLFYSFFKTLVGKE+AVELKNDV LTGTLHSVDQYLNVKL V VVD ++YPQL A+KNCFIRGSVVRYIQIPS +VDTELLQDA RKE+A K
Sbjct: 43 MLFYSFFKTLVGKEVAVELKNDVVLTGTLHSVDQYLNVKLNNVQVVDKQKYPQLLALKNCFIRGSVVRYIQIPSGEVDTELLQDAARKENAPQK 136
BLAST of mRNA_P-littoralis_Contig130.47.1 vs. uniprot
Match: A0A7S3PVL2_9STRA (U6 snRNA-associated Sm-like protein LSm2 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVL2_9STRA) HSP 1 Score: 155 bits (392), Expect = 2.370e-47 Identity = 77/93 (82.80%), Postives = 83/93 (89.25%), Query Frame = 0
Query: 2 LFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLTEVHVVDAERYPQLGAIKNCFIRGSVVRYIQIPSADVDTELLQDACRKESAQGK 94
LFYSFFKTLVGKE+AVELKNDV LTGTLHSVDQYLNVKL V VVD ++YPQL A+KNCFIRGSVVRYIQIPS +VDTELLQDA RKE+A K
Sbjct: 13 LFYSFFKTLVGKEVAVELKNDVVLTGTLHSVDQYLNVKLNNVQVVDKQKYPQLLALKNCFIRGSVVRYIQIPSGEVDTELLQDAARKENAPQK 105
BLAST of mRNA_P-littoralis_Contig130.47.1 vs. uniprot
Match: A0A7S2RW57_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RW57_9STRA) HSP 1 Score: 154 bits (390), Expect = 2.060e-46 Identity = 73/93 (78.49%), Postives = 87/93 (93.55%), Query Frame = 0
Query: 1 MLFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLTEVHVVDAERYPQLGAIKNCFIRGSVVRYIQIPSADVDTELLQDACRKESAQG 93
M F SFFKTL+GKEIAVELKNDVALTGTLHSVDQYLN+KLT+V VVD+ER+PQL A+KNCFIRGSVVRY+QIP+++VDTELLQDA R+++ +G
Sbjct: 47 MFFNSFFKTLIGKEIAVELKNDVALTGTLHSVDQYLNIKLTDVQVVDSERFPQLQAMKNCFIRGSVVRYVQIPASEVDTELLQDAARQQAKEG 139
BLAST of mRNA_P-littoralis_Contig130.47.1 vs. uniprot
Match: A0A6U3SK19_9STRA (U6 snRNA-associated Sm-like protein LSm2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3SK19_9STRA) HSP 1 Score: 152 bits (384), Expect = 3.820e-46 Identity = 73/90 (81.11%), Postives = 84/90 (93.33%), Query Frame = 0
Query: 3 FYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLTEVHVVDAERYPQLGAIKNCFIRGSVVRYIQIPSADVDTELLQDACRKESAQ 92
F SFFKTL+GKEIAVELKNDVALTGTLHSVDQYLN+KLT+V VVDAER+PQL A+KNCFIRGSVVRY+QIP A+VDTELLQDA R+++ +
Sbjct: 6 FNSFFKTLIGKEIAVELKNDVALTGTLHSVDQYLNIKLTDVQVVDAERFPQLTAMKNCFIRGSVVRYVQIPGAEVDTELLQDAARQQNKE 95
BLAST of mRNA_P-littoralis_Contig130.47.1 vs. uniprot
Match: A0A7S2U7M8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7M8_9STRA) HSP 1 Score: 151 bits (381), Expect = 2.770e-45 Identity = 74/91 (81.32%), Postives = 82/91 (90.11%), Query Frame = 0
Query: 1 MLFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLTEVHVVDAERYPQLGAIKNCFIRGSVVRYIQIPSADVDTELLQDACRKESA 91
MLFYSFFKTLVGKE+A+ELKNDV LTGTLHSVDQYLNVKLT+V VV+ E+YPQL ++NCFIRGSVVRYIQI DVDTELLQDA RKE+A
Sbjct: 38 MLFYSFFKTLVGKEVAIELKNDVVLTGTLHSVDQYLNVKLTDVQVVNKEQYPQLVPLRNCFIRGSVVRYIQIAPGDVDTELLQDATRKENA 128
BLAST of mRNA_P-littoralis_Contig130.47.1 vs. uniprot
Match: A0A024U6S4_9STRA (U6 snRNA-associated Sm-like protein LSm2 n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A024U6S4_9STRA) HSP 1 Score: 149 bits (376), Expect = 5.270e-45 Identity = 72/94 (76.60%), Postives = 82/94 (87.23%), Query Frame = 0
Query: 1 MLFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLTEVHVVDAERYPQLGAIKNCFIRGSVVRYIQIPSADVDTELLQDACRKESAQGK 94
MLFYSFFKTL+GKE+AVELKNDVAL GTLHSVDQYLN+KLT+V VV+ +YPQL +KNCFIRGSVVRYIQI ADVDTELLQDA R+E + +
Sbjct: 1 MLFYSFFKTLIGKEVAVELKNDVALVGTLHSVDQYLNIKLTDVSVVEENKYPQLMNMKNCFIRGSVVRYIQIAKADVDTELLQDAARREGSANR 94
BLAST of mRNA_P-littoralis_Contig130.47.1 vs. uniprot
Match: A0A4D9DC94_9STRA (U6 snRNA-associated Sm-like protein LSm2 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DC94_9STRA) HSP 1 Score: 149 bits (375), Expect = 6.620e-45 Identity = 71/94 (75.53%), Postives = 83/94 (88.30%), Query Frame = 0
Query: 1 MLFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLTEVHVVDAERYPQLGAIKNCFIRGSVVRYIQIPSADVDTELLQDACRKESAQGK 94
MLFYSFFKTLVGKE+AVELKNDV LTG LHSVDQYLNVKL +V VV ERYPQL A+KN FIRGSV+R+IQ+P++DVD +LLQD+CRK++ GK
Sbjct: 1 MLFYSFFKTLVGKEVAVELKNDVELTGKLHSVDQYLNVKLEDVQVVKKERYPQLLAVKNVFIRGSVIRFIQLPASDVDVQLLQDSCRKDNQSGK 94
BLAST of mRNA_P-littoralis_Contig130.47.1 vs. uniprot
Match: A0A7S4K237_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K237_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.280e-44 Identity = 74/91 (81.32%), Postives = 79/91 (86.81%), Query Frame = 0
Query: 1 MLFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLTEVHVVDAERYPQLGAIKNCFIRGSVVRYIQIPSADVDTELLQDACRKESA 91
MLFYSFFKTLVGKE+AVELKNDV LTGTLHSVDQYLNVKL V VVD RYPQL + N F+RGSVVRYIQIP+ DVDTELLQDA RKE+A
Sbjct: 3 MLFYSFFKTLVGKEVAVELKNDVVLTGTLHSVDQYLNVKLNNVSVVDKGRYPQLLTLNNVFVRGSVVRYIQIPAGDVDTELLQDAARKENA 93 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig130.47.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig130.47.1 ID=prot_P-littoralis_Contig130.47.1|Name=mRNA_P-littoralis_Contig130.47.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=95bpback to top |