prot_P-littoralis_Contig130.30.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig130.30.1
Unique Nameprot_P-littoralis_Contig130.30.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length203
Homology
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BLAST of mRNA_P-littoralis_Contig130.30.1 vs. uniprot
Match: D8LUA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA1_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 5.300e-50
Identity = 113/206 (54.85%), Postives = 130/206 (63.11%), Query Frame = 0 
Query:    4 LEADVLSVVLQYVDTLDDTSPRHHIQHVVQIRGGAECRRVSRGWRTSVEDAIGRALPPMPSVSLASLLVPGRLRFVLLSCRYNHLGE-----GVDRAYDALVSRAEAVGVQLRDATAXXXXXXXXXXXXXXXXPSS---SREQDGSRVSPAECRHYSCYRVALKRIVGEVLDSPAFAWCSTLDPDDSRLLRGCVGALALLKACWFS 201
            LEADVLSVVL++VD+L+   P   + HVV ++GGAECR V R WR +VE  IGR LPPM  VSLA+LLVPGRLR VLLSC+Y  LG          A+ ALVSRA+A          XXXXXXXXX       PS    + E  G          + C RVALKRIV E LDSPAF+WCSTL  DDSRLL  CVGA +L+ A WFS
Sbjct:    3 LEADVLSVVLEFVDSLEGAPPSEEVAHVV-VQGGAECRAVCRSWRITVEKTIGRVLPPMTPVSLAALLVPGRLRGVLLSCQY--LGREFHEHAAAAAFVALVSRADAXXXXXXXXXXXXXXXXXXXAGAPRGVPSQGVMAEEAAGGEGIINNNTSFVCCRVALKRIVREALDSPAFSWCSTLGLDDSRLLESCVGASSLVNARWFS 205
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig130.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LUA1_ECTSI5.300e-5054.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig130contigP-littoralis_Contig130:173593..174363 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig130.30.1mRNA_P-littoralis_Contig130.30.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig130 173593..174363 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig130.30.1 ID=prot_P-littoralis_Contig130.30.1|Name=mRNA_P-littoralis_Contig130.30.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=203bp
MVVLEADVLSVVLQYVDTLDDTSPRHHIQHVVQIRGGAECRRVSRGWRTS
VEDAIGRALPPMPSVSLASLLVPGRLRFVLLSCRYNHLGEGVDRAYDALV
SRAEAVGVQLRDATAAAAAAAAAAAVQKTSSPSSSREQDGSRVSPAECRH
YSCYRVALKRIVGEVLDSPAFAWCSTLDPDDSRLLRGCVGALALLKACWF
SE*
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