mRNA_P-littoralis_Contig130.26.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig130.26.1 vs. uniprot
Match: A0A6H5K049_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K049_9PHAE) HSP 1 Score: 182 bits (462), Expect = 4.460e-55 Identity = 93/164 (56.71%), Postives = 113/164 (68.90%), Query Frame = 1
Query: 1 RRPYDRYCTSPAAVDALVAEVSIEGLVLDMCGG-----GRTLANSCLLRCVSIYASRCADTSLDASSGSFARVYLEKT-GQQPDWVVTSPPYKGAIKFVMAALEVARYGVALKSPLSFMEPCADRATWLQENSPSVCVFLRRSTYTPAHITVGEFWGVWYKSGN 474
RR DRYCTSPA ++AL+ VSI G VLDMCGG L ++C + + T+LDASS SF +L GQQPDW+VTSPPYKGA+ FV AAL VA+ GVALK PLSF+EPCADRA WLQ N P++C+ + R+ Y PAH+ VGEFWGVWY G+
Sbjct: 65 RRCVDRYCTSPATLEALLGVVSISGCVLDMCGGTDDAVAIRLRDTCQVLTNDVGPRLSPATNLDASSASFTDDFLAAHHGQQPDWIVTSPPYKGALAFVKAALTVAKKGVALKLPLSFLEPCADRAGWLQANPPALCMMMSRARYQPAHVRVGEFWGVWYPPGS 228
BLAST of mRNA_P-littoralis_Contig130.26.1 vs. uniprot
Match: A0A6H5KHQ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ4_9PHAE) HSP 1 Score: 184 bits (466), Expect = 8.070e-55 Identity = 99/182 (54.40%), Postives = 125/182 (68.68%), Query Frame = 1
Query: 1 RRPYDRYCTSPAAVDALVAEVSIEGLVLDMCGG-----GRTLANSC------LLRCVSIYASRCADTSLDASSGSFARVYL-EKTGQQPDWVVTSPPYKGAIKFVMAALEVARYGVALKSPLSFMEPCADRATWLQENSPSVCVFLRRSTYTPAHITVGEFWGVWYKSGNEGR---GTRMVF 501
RR DRYCTS AV+AL+ V++ G VLDMCGG R L ++C + +S A R DTSLDAS +FA +L + QQP+ VV SPPYKGA+KFV AAL VA++GVALK LSF+EPC DRA WL+ N P+VCVFLRR++YTP H+ +GEFWGVWY +G + GT++VF
Sbjct: 113 RRHLDRYCTSIVAVEALLDAVNVSGRVLDMCGGPDDAVARKLRDTCEVVTNDVSSRLSSDARRAPDTSLDASKSTFAAEFLADGFQQQPERVVASPPYKGAVKFVKAALCVAKHGVALKRSLSFLEPCVDRADWLEANPPTVCVFLRRASYTPEHVMMGEFWGVWYCTGGDRTAVGGTKLVF 294
BLAST of mRNA_P-littoralis_Contig130.26.1 vs. uniprot
Match: A0A6H5JUK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK3_9PHAE) HSP 1 Score: 182 bits (462), Expect = 3.820e-54 Identity = 97/179 (54.19%), Postives = 119/179 (66.48%), Query Frame = 1
Query: 1 RRPYDRYCTSPAAVDALVAEVSIEGLVLDMCGG-----GRTLANSCLLRCVSIYASRCADTSLDASSGSFARVYLEKT-GQQPDWVVTSPPYKGAIKFVMAALEVARYGVALKSPLSFMEPCADRATWLQENSPSVCVFLRRSTYTPAH-ITVGEFWGVWYKSGN---EGRGTRMVFCP 507
RR DRYCT P AV+ L V+I G VLDMCGG + ++C + + + A T+LDAS SF + + G+QPDWVVTSPPYKGA+ FV AAL VA GVALK PLSF+EPCADR WL +N P+VC+FLRR+ YT AH + VGEFWGVWY G + G+R+VFCP
Sbjct: 123 RRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSSRLSAGTNLDASLLSFRDNFRKANPGKQPDWVVTSPPYKGAVGFVKAALAVATKGVALKLPLSFLEPCADRGGWLVDNPPAVCIFLRRAKYTHAHHVKVGEFWGVWYTDGGCCGKSGGSRLVFCP 301
BLAST of mRNA_P-littoralis_Contig130.26.1 vs. uniprot
Match: A0A6H5KAM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM1_9PHAE) HSP 1 Score: 157 bits (398), Expect = 1.160e-46 Identity = 76/119 (63.87%), Postives = 88/119 (73.95%), Query Frame = 1
Query: 163 DTSLDASSGSFARVYLEK-TGQQPDWVVTSPPYKGAIKFVMAALEVARYGVALKSPLSFMEPCADRATWLQENSPSVCVFLRRSTYTPAHITVGEFWGVWYKSGNE---GRGTRMVFCP 507
DT+LDASS S+A YL GQQPDWVV SPPYKGA+ FV AAL VA+ GVALK PLSF+EPCADRA WLQEN PS+C+ + R+ Y PAH+ VGEFWGVWY G G T++ F P
Sbjct: 13 DTNLDASSTSYADDYLAAHNGQQPDWVVASPPYKGALSFVKAALTVAKEGVALKLPLSFLEPCADRAGWLQENPPSLCMMMSRARYQPAHVRVGEFWGVWYPPGGGSSIGDSTKLSFLP 131
BLAST of mRNA_P-littoralis_Contig130.26.1 vs. uniprot
Match: A0A6H5JT40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT40_9PHAE) HSP 1 Score: 145 bits (367), Expect = 6.040e-42 Identity = 71/119 (59.66%), Postives = 87/119 (73.11%), Query Frame = 1
Query: 163 DTSLDASSGSFARVYLEK-TGQQPDWVVTSPPYKGAIKFVMAALEVARYGVALKSPLSFMEPCADRATWLQENSPSVCVFLRRSTYTPAHITVGEFWGVWYKSGN---EGRGTRMVFCP 507
DT+LDASS SFA YL GQQPDWVV+SPPY+GA+ FV AAL VA+ GVALK PLSF+EPCADRA WLQ N P++C+ + R+ Y PA + VGEF GVWY G+ T+++F P
Sbjct: 14 DTNLDASSASFADDYLAAHNGQQPDWVVSSPPYEGALAFVKAALTVAKEGVALKLPLSFLEPCADRAVWLQANPPALCMMMSRARYQPALVRVGEFRGVWYPPGSGSSSSDSTKLLFLP 132
BLAST of mRNA_P-littoralis_Contig130.26.1 vs. uniprot
Match: A0A6H5JSV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSV3_9PHAE) HSP 1 Score: 147 bits (370), Expect = 7.170e-42 Identity = 70/119 (58.82%), Postives = 85/119 (71.43%), Query Frame = 1
Query: 163 DTSLDASSGSFARVYLEKTG-QQPDWVVTSPPYKGAIKFVMAALEVARYGVALKSPLSFMEPCADRATWLQENSPSVCVFLRRSTYTPAHITVGEFWGVWYKSGN---EGRGTRMVFCP 507
DT+LDASS SF +L QQPDWVVT PPY GA+ FV AAL VA+ GVALK PLSF+EPCADRA WLQ N P++C+ + R+ Y PAH+ VGEFWGVWY G+ T+++F P
Sbjct: 54 DTNLDASSASFTDDFLAAHHEQQPDWVVTRPPYNGALAFVKAALPVAKKGVALKLPLSFLEPCADRAGWLQANPPALCMMMSRARYQPAHVRVGEFWGVWYPPGSGYSSSDSTKLLFVP 172
BLAST of mRNA_P-littoralis_Contig130.26.1 vs. uniprot
Match: D7FJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU4_ECTSI) HSP 1 Score: 143 bits (361), Expect = 6.590e-40 Identity = 80/144 (55.56%), Postives = 99/144 (68.75%), Query Frame = 1
Query: 1 RRPYDRYCTSPAAVDALVAEVSIEGLVLDMCGG-GRTLANSCLLRCVSI---YASRCA------DTSLDASSGSFARVYL-EKTGQQPDWVVTSPPYKGAIKFVMAALEVARYGVALKSPLSFMEPCADRATWLQENSPSVCVF 399
RR DRYCTSP AV+AL+ V +EG VLDMCGG G +A C + ++R + DT+LDAS SFA +L K GQ+PDWV+TSPPYKGA+++V +AL +A GVALK PLSF+EPCADR WLQ N P+VCVF
Sbjct: 77 RRCLDRYCTSPEAVEALLGAVELEGCVLDMCGGPGDAIATRLGATCKVVTNDISTRLSPGGLPPDTNLDASLASFAVDFLLAKPGQRPDWVLTSPPYKGALEYVKSALSLAAKGVALKLPLSFLEPCADRGGWLQANPPAVCVF 220
BLAST of mRNA_P-littoralis_Contig130.26.1 vs. uniprot
Match: A0A6H5K929_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K929_9PHAE) HSP 1 Score: 139 bits (349), Expect = 3.240e-39 Identity = 64/99 (64.65%), Postives = 76/99 (76.77%), Query Frame = 1
Query: 220 GQQPDWVVTSPPYKGAIKFVMAALEVARYGVALKSPLSFMEPCADRATWLQENSPSVCVFLRRSTYTPAH-ITVGEFWGVWYKSGNEGR--GTRMVFCP 507
G+QPDWVVTSPPYKGA+ FV A L VA GVAL+ PLSF +PCADR +WL +N P +C FLRR+ YT AH + VGEFWGVWY G G+ G+R+VFCP
Sbjct: 34 GKQPDWVVTSPPYKGAVGFVKAVLAVAAKGVALRLPLSFRKPCADRGSWLVDNPPVMCGFLRRAKYTHAHHVKVGEFWGVWYTDGGCGKSGGSRLVFCP 132
BLAST of mRNA_P-littoralis_Contig130.26.1 vs. uniprot
Match: A0A6H5K9B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9B9_9PHAE) HSP 1 Score: 128 bits (322), Expect = 5.690e-35 Identity = 62/107 (57.94%), Postives = 74/107 (69.16%), Query Frame = 1
Query: 172 LDASSGSFARVYLEKTGQQ------PDWVVTSPPYKGAIKFVMAALEVARYGVALKSPLSFMEPCADRATWLQENSPSVCVFLRRSTYTPAHITVGEFWGVWYKSGN 474
L S + AR +L T Q PDWVVTSPPYKGA+ FV AAL VA+ VALK PLSF+EPCADR WLQ N P++C+ + R+ Y PAH+ VGEFWGVWY G+
Sbjct: 32 LRTRSWTRARRHLRTTTSQHTTENNPDWVVTSPPYKGALGFVKAALTVAKESVALKLPLSFLEPCADREGWLQANPPALCMMMSRARYQPAHVRVGEFWGVWYPPGS 138
BLAST of mRNA_P-littoralis_Contig130.26.1 vs. uniprot
Match: A0A6H5L1N5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1N5_9PHAE) HSP 1 Score: 115 bits (287), Expect = 3.000e-29 Identity = 77/174 (44.25%), Postives = 89/174 (51.15%), Query Frame = 1
Query: 1 RRPYDRYCTSPAAVDALVAEVSIEGLVLDMCGGGRTLANSCLLRCVSIYASRCADTSLDASSGSFARVYL-EKTGQQPDWVVTSPPYKGAIKFVMAALEVARYGVALKSPLSFMEPCADRATWLQENSPSVCVFLRRSTYTPAHITVGEFWGVWYKSG----NEGRGTRMVFCP 507
RR DRYCTSPAAVDAL A V+I G VLDMCGG + C T+LDAS F ++ + G++PDWVVTSPPYKG++ FV AAL VA GVALK L P VGEFWGVWY G N G +R+VFCP
Sbjct: 42 RRRLDRYCTSPAAVDALRAAVAITGCVLDMCGGPEDAV-------AQGFGGTC--TNLDASLVYFPDEFIKDNPGKKPDWVVTSPPYKGSVGFVHAALAVATKGVALKLSLYSWNPVPTGE-------------------------VGEFWGVWYTDGSYCGNSGV-SRLVFCP 180 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig130.26.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig130.26.1 >prot_P-littoralis_Contig130.26.1 ID=prot_P-littoralis_Contig130.26.1|Name=mRNA_P-littoralis_Contig130.26.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=170bp RRPYDRYCTSPAAVDALVAEVSIEGLVLDMCGGGRTLANSCLLRCVSIYAback to top mRNA from alignment at P-littoralis_Contig130:152299..153010+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig130.26.1 ID=mRNA_P-littoralis_Contig130.26.1|Name=mRNA_P-littoralis_Contig130.26.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=712bp|location=Sequence derived from alignment at P-littoralis_Contig130:152299..153010+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig130:152299..153010+ >mRNA_P-littoralis_Contig130.26.1 ID=mRNA_P-littoralis_Contig130.26.1|Name=mRNA_P-littoralis_Contig130.26.1|organism=Pylaiella littoralis U1_48|type=CDS|length=510bp|location=Sequence derived from alignment at P-littoralis_Contig130:152299..153010+ (Pylaiella littoralis U1_48)back to top |